data_1C27
#
_model_server_result.job_id            o4dQIpnbzAsT613bA5AgLA 
_model_server_result.datetime_utc      '2024-10-10 23:36:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1c27 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":300}' 
#
_entry.id    1C27 
#
_exptl.entry_id    1C27 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              167.143 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(1-AMINO-PENTYL)-PHOSPHONIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          111.52 
_cell.angle_gamma         90 
_cell.entry_id            1C27 
_cell.length_a            39.298 
_cell.length_b            67.206 
_cell.length_c            49.104 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1C27 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O ASN 73 A ASN 74 1_555 D NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.895 ? 
metalc ? metalc2 A O VAL 75 A VAL 76 1_555 D NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.641 ? 
metalc ? metalc3 A OD2 ASP 96 A ASP 97 1_555 C CO CO . A CO 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? 
metalc ? metalc4 A OD1 ASP 96 A ASP 97 1_555 C CO CO . A CO 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? 
metalc ? metalc5 A OD1 ASP 107 A ASP 108 1_555 B CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.853 ? 
metalc ? metalc6 A OD2 ASP 107 A ASP 108 1_555 C CO CO . A CO 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? 
metalc ? metalc7 A NE2 HIS 170 A HIS 171 1_555 B CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? 
metalc ? metalc8 A OE2 GLU 203 A GLU 204 1_555 B CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? 
metalc ? metalc9 A O SER 230 A SER 231 1_555 D NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.748 ? 
metalc ? metalc10 A OE1 GLU 234 A GLU 235 1_555 B CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? 
metalc ? metalc11 A OE2 GLU 234 A GLU 235 1_555 C CO CO . A CO 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? 
metalc ? metalc12 E O2 NLP . A NLP 300 1_555 B CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.604 ? 
metalc ? metalc13 E O1 NLP . A NLP 300 1_555 B CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? 
metalc ? metalc14 E N NLP . A NLP 300 1_555 C CO CO . A CO 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? 
metalc ? metalc15 E O1 NLP . A NLP 300 1_555 C CO CO . A CO 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? 
metalc ? metalc16 D NA NA . A NA 501 1_555 F O HOH . A HOH 551 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.822 ? 
#
_chem_comp.formula           'C5 H14 N O3 P' 
_chem_comp.formula_weight    167.143 
_chem_comp.id                NLP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              '(1-AMINO-PENTYL)-PHOSPHONIC ACID' 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     'NORLEUCINE PHOSPHONATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA NLP sing 237 n n 
N HN1 NLP sing 238 n n 
N HN2 NLP sing 239 n n 
CA CB NLP sing 240 n n 
CA P NLP sing 241 n n 
CA HA NLP sing 242 n n 
CB CG NLP sing 243 n n 
CB HB1 NLP sing 244 n n 
CB HB2 NLP sing 245 n n 
CG CD NLP sing 246 n n 
CG HG1 NLP sing 247 n n 
CG HG2 NLP sing 248 n n 
CD CE NLP sing 249 n n 
CD HD1 NLP sing 250 n n 
CD HD2 NLP sing 251 n n 
CE HE1 NLP sing 252 n n 
CE HE2 NLP sing 253 n n 
CE HE3 NLP sing 254 n n 
P O1 NLP doub 255 n n 
P O2 NLP sing 256 n n 
P O3 NLP sing 257 n n 
O2 HO2 NLP sing 258 n n 
O3 HO3 NLP sing 259 n n 
#
_atom_sites.entry_id                     1C27 
_atom_sites.fract_transf_matrix[1][1]    0.025447 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.010034 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01488 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.021891 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CO A 1 401 401 CO CO+ . 
C 2 CO A 1 402 402 CO CO+ . 
D 3 NA A 1 501 501 NA NA+ . 
E 4 NLP A 1 300 1 NLP INH . 
F 5 HOH A 1 502 1 HOH HOH . 
F 5 HOH A 2 503 2 HOH HOH . 
F 5 HOH A 3 504 3 HOH HOH . 
F 5 HOH A 4 505 4 HOH HOH . 
F 5 HOH A 5 506 5 HOH HOH . 
F 5 HOH A 6 507 6 HOH HOH . 
F 5 HOH A 7 508 7 HOH HOH . 
F 5 HOH A 8 509 8 HOH HOH . 
F 5 HOH A 9 510 9 HOH HOH . 
F 5 HOH A 10 511 10 HOH HOH . 
F 5 HOH A 11 512 11 HOH HOH . 
F 5 HOH A 12 513 12 HOH HOH . 
F 5 HOH A 13 514 13 HOH HOH . 
F 5 HOH A 14 515 14 HOH HOH . 
F 5 HOH A 15 516 15 HOH HOH . 
F 5 HOH A 16 517 16 HOH HOH . 
F 5 HOH A 17 518 17 HOH HOH . 
F 5 HOH A 18 519 18 HOH HOH . 
F 5 HOH A 19 520 19 HOH HOH . 
F 5 HOH A 20 521 20 HOH HOH . 
F 5 HOH A 21 522 21 HOH HOH . 
F 5 HOH A 22 523 22 HOH HOH . 
F 5 HOH A 23 524 23 HOH HOH . 
F 5 HOH A 24 525 24 HOH HOH . 
F 5 HOH A 25 526 25 HOH HOH . 
F 5 HOH A 26 527 26 HOH HOH . 
F 5 HOH A 27 528 27 HOH HOH . 
F 5 HOH A 28 529 28 HOH HOH . 
F 5 HOH A 29 530 29 HOH HOH . 
F 5 HOH A 30 531 30 HOH HOH . 
F 5 HOH A 31 532 31 HOH HOH . 
F 5 HOH A 32 533 32 HOH HOH . 
F 5 HOH A 33 534 33 HOH HOH . 
F 5 HOH A 34 535 34 HOH HOH . 
F 5 HOH A 35 536 35 HOH HOH . 
F 5 HOH A 36 537 36 HOH HOH . 
F 5 HOH A 37 538 37 HOH HOH . 
F 5 HOH A 38 539 38 HOH HOH . 
F 5 HOH A 39 540 39 HOH HOH . 
F 5 HOH A 40 541 40 HOH HOH . 
F 5 HOH A 41 542 41 HOH HOH . 
F 5 HOH A 42 543 42 HOH HOH . 
F 5 HOH A 43 544 43 HOH HOH . 
F 5 HOH A 44 545 44 HOH HOH . 
F 5 HOH A 45 546 45 HOH HOH . 
F 5 HOH A 46 547 46 HOH HOH . 
F 5 HOH A 47 548 47 HOH HOH . 
F 5 HOH A 48 549 48 HOH HOH . 
F 5 HOH A 49 550 50 HOH HOH . 
F 5 HOH A 50 551 51 HOH HOH . 
F 5 HOH A 51 552 52 HOH HOH . 
F 5 HOH A 52 553 53 HOH HOH . 
F 5 HOH A 53 554 54 HOH HOH . 
F 5 HOH A 54 555 55 HOH HOH . 
F 5 HOH A 55 556 56 HOH HOH . 
F 5 HOH A 56 557 57 HOH HOH . 
F 5 HOH A 57 558 58 HOH HOH . 
F 5 HOH A 58 559 59 HOH HOH . 
F 5 HOH A 59 560 60 HOH HOH . 
F 5 HOH A 60 561 61 HOH HOH . 
F 5 HOH A 61 562 62 HOH HOH . 
F 5 HOH A 62 563 63 HOH HOH . 
F 5 HOH A 63 564 66 HOH HOH . 
F 5 HOH A 64 565 67 HOH HOH . 
F 5 HOH A 65 566 70 HOH HOH . 
F 5 HOH A 66 567 71 HOH HOH . 
F 5 HOH A 67 568 72 HOH HOH . 
F 5 HOH A 68 569 73 HOH HOH . 
F 5 HOH A 69 570 74 HOH HOH . 
F 5 HOH A 70 571 75 HOH HOH . 
F 5 HOH A 71 572 76 HOH HOH . 
F 5 HOH A 72 573 77 HOH HOH . 
F 5 HOH A 73 574 80 HOH HOH . 
F 5 HOH A 74 575 82 HOH HOH . 
F 5 HOH A 75 576 83 HOH HOH . 
F 5 HOH A 76 577 84 HOH HOH . 
F 5 HOH A 77 578 85 HOH HOH . 
F 5 HOH A 78 579 86 HOH HOH . 
F 5 HOH A 79 580 87 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N NLP . . . E 4 20.334 -15.265 9.234 1 25.53 ? N NLP 300 A 1 
HETATM 2 C CA NLP . . . E 4 20.895 -13.908 8.883 1 28.29 ? CA NLP 300 A 1 
HETATM 3 C CB NLP . . . E 4 22.24 -14.01 8.162 1 34.74 ? CB NLP 300 A 1 
HETATM 4 C CG NLP . . . E 4 23.504 -14.163 9.107 1 42.39 ? CG NLP 300 A 1 
HETATM 5 C CD NLP . . . E 4 24.773 -13.586 8.459 1 49.5 ? CD NLP 300 A 1 
HETATM 6 C CE NLP . . . E 4 25.862 -14.482 9.08 1 50.07 ? CE NLP 300 A 1 
HETATM 7 P P NLP . . . E 4 19.792 -13.005 7.839 1 23.62 ? P NLP 300 A 1 
HETATM 8 O O1 NLP . . . E 4 18.324 -13.161 8.449 1 25.85 ? O1 NLP 300 A 1 
HETATM 9 O O2 NLP . . . E 4 19.908 -13.583 6.349 1 30.24 ? O2 NLP 300 A 1 
HETATM 10 O O3 NLP . . . E 4 20.126 -11.465 7.885 1 27.16 ? O3 NLP 300 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           276 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           10 
#