data_1C2R # _model_server_result.job_id BHLXYm04SwPSJ2uK7yvfOQ _model_server_result.datetime_utc '2024-11-05 01:16:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1c2r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":120}' # _entry.id 1C2R # _exptl.entry_id 1C2R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 618.503 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEME C' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1C2R _cell.length_a 100.03 _cell.length_b 100.03 _cell.length_c 162.1 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1C2R _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 13 A CYS 13 1_555 C CAB HEC . A HEC 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.784 ? covale ? covale2 A SG CYS 16 A CYS 16 1_555 C CAC HEC . A HEC 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? covale ? covale3 B SG CYS 13 B CYS 13 1_555 D CAB HEC . B HEC 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.893 ? metalc ? metalc1 A NE2 HIS 17 A HIS 17 1_555 C FE HEC . A HEC 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc2 A SD MET 96 A MET 96 1_555 C FE HEC . A HEC 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc3 B NE2 HIS 17 B HIS 17 1_555 D FE HEC . B HEC 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.915 ? metalc ? metalc4 B SD MET 96 B MET 96 1_555 D FE HEC . B HEC 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? # _chem_comp.formula 'C34 H34 Fe N4 O4' _chem_comp.formula_weight 618.503 _chem_comp.id HEC _chem_comp.mon_nstd_flag . _chem_comp.name 'HEME C' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE NA HEC sing 110 n n FE NB HEC sing 111 n n FE NC HEC sing 112 n n FE ND HEC sing 113 n n CHA C1A HEC doub 114 n n CHA C4D HEC sing 115 n n CHA HHA HEC sing 116 n n CHB C4A HEC doub 117 n n CHB C1B HEC sing 118 n n CHB HHB HEC sing 119 n n CHC C4B HEC doub 120 n n CHC C1C HEC sing 121 n n CHC HHC HEC sing 122 n n CHD C4C HEC doub 123 n n CHD C1D HEC sing 124 n n CHD HHD HEC sing 125 n n NA C1A HEC sing 126 n y NA C4A HEC sing 127 n y C1A C2A HEC sing 128 n y C2A C3A HEC doub 129 n y C2A CAA HEC sing 130 n n C3A C4A HEC sing 131 n y C3A CMA HEC sing 132 n n CMA HMA1 HEC sing 133 n n CMA HMA2 HEC sing 134 n n CMA HMA3 HEC sing 135 n n CAA CBA HEC sing 136 n n CAA HAA1 HEC sing 137 n n CAA HAA2 HEC sing 138 n n CBA CGA HEC sing 139 n n CBA HBA1 HEC sing 140 n n CBA HBA2 HEC sing 141 n n CGA O1A HEC doub 142 n n CGA O2A HEC sing 143 n n O2A H2A HEC sing 144 n n NB C1B HEC sing 145 n y NB C4B HEC sing 146 n y C1B C2B HEC doub 147 n y C2B C3B HEC sing 148 n y C2B CMB HEC sing 149 n n C3B C4B HEC sing 150 n y C3B CAB HEC doub 151 e n CMB HMB1 HEC sing 152 n n CMB HMB2 HEC sing 153 n n CMB HMB3 HEC sing 154 n n CAB CBB HEC sing 155 n n CAB HAB HEC sing 156 n n CBB HBB1 HEC sing 157 n n CBB HBB2 HEC sing 158 n n CBB HBB3 HEC sing 159 n n NC C1C HEC sing 160 n y NC C4C HEC sing 161 n y C1C C2C HEC doub 162 n y C2C C3C HEC sing 163 n y C2C CMC HEC sing 164 n n C3C C4C HEC sing 165 n y C3C CAC HEC doub 166 e n CMC HMC1 HEC sing 167 n n CMC HMC2 HEC sing 168 n n CMC HMC3 HEC sing 169 n n CAC CBC HEC sing 170 n n CAC HAC HEC sing 171 n n CBC HBC1 HEC sing 172 n n CBC HBC2 HEC sing 173 n n CBC HBC3 HEC sing 174 n n ND C1D HEC sing 175 n y ND C4D HEC sing 176 n y C1D C2D HEC doub 177 n y C2D C3D HEC sing 178 n y C2D CMD HEC sing 179 n n C3D C4D HEC doub 180 n y C3D CAD HEC sing 181 n n CMD HMD1 HEC sing 182 n n CMD HMD2 HEC sing 183 n n CMD HMD3 HEC sing 184 n n CAD CBD HEC sing 185 n n CAD HAD1 HEC sing 186 n n CAD HAD2 HEC sing 187 n n CBD CGD HEC sing 188 n n CBD HBD1 HEC sing 189 n n CBD HBD2 HEC sing 190 n n CGD O1D HEC doub 191 n n CGD O2D HEC sing 192 n n O2D H2D HEC sing 193 n n # _atom_sites.entry_id 1C2R _atom_sites.fract_transf_matrix[1][1] 0.009997 _atom_sites.fract_transf_matrix[1][2] 0.005772 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011544 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006169 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEC A 1 120 120 HEC HEM . D 2 HEC B 1 120 120 HEC HEM . E 3 HOH A 1 121 2 HOH HOH . E 3 HOH A 2 122 3 HOH HOH . E 3 HOH A 3 123 4 HOH HOH . E 3 HOH A 4 124 7 HOH HOH . E 3 HOH A 5 125 9 HOH HOH . E 3 HOH A 6 126 10 HOH HOH . E 3 HOH A 7 127 11 HOH HOH . E 3 HOH A 8 128 14 HOH HOH . E 3 HOH A 9 129 15 HOH HOH . E 3 HOH A 10 130 16 HOH HOH . E 3 HOH A 11 131 18 HOH HOH . E 3 HOH A 12 132 19 HOH HOH . E 3 HOH A 13 133 20 HOH HOH . E 3 HOH A 14 134 21 HOH HOH . E 3 HOH A 15 135 27 HOH HOH . E 3 HOH A 16 136 31 HOH HOH . E 3 HOH A 17 137 32 HOH HOH . E 3 HOH A 18 138 33 HOH HOH . E 3 HOH A 19 139 34 HOH HOH . E 3 HOH A 20 140 35 HOH HOH . E 3 HOH A 21 141 36 HOH HOH . E 3 HOH A 22 142 37 HOH HOH . E 3 HOH A 23 143 38 HOH HOH . E 3 HOH A 24 144 39 HOH HOH . E 3 HOH A 25 145 40 HOH HOH . E 3 HOH A 26 146 41 HOH HOH . E 3 HOH A 27 147 42 HOH HOH . E 3 HOH A 28 148 43 HOH HOH . E 3 HOH A 29 149 44 HOH HOH . E 3 HOH A 30 150 45 HOH HOH . E 3 HOH A 31 151 49 HOH HOH . E 3 HOH A 32 152 50 HOH HOH . E 3 HOH A 33 153 51 HOH HOH . E 3 HOH A 34 154 52 HOH HOH . E 3 HOH A 35 155 53 HOH HOH . E 3 HOH A 36 156 54 HOH HOH . E 3 HOH A 37 157 55 HOH HOH . E 3 HOH A 38 158 56 HOH HOH . E 3 HOH A 39 159 58 HOH HOH . E 3 HOH A 40 160 62 HOH HOH . E 3 HOH A 41 161 67 HOH HOH . E 3 HOH A 42 162 74 HOH HOH . E 3 HOH A 43 163 77 HOH HOH . E 3 HOH A 44 164 80 HOH HOH . E 3 HOH A 45 165 81 HOH HOH . E 3 HOH A 46 166 82 HOH HOH . E 3 HOH A 47 167 83 HOH HOH . E 3 HOH A 48 168 84 HOH HOH . F 3 HOH B 1 121 1 HOH HOH . F 3 HOH B 2 122 5 HOH HOH . F 3 HOH B 3 123 6 HOH HOH . F 3 HOH B 4 124 8 HOH HOH . F 3 HOH B 5 125 12 HOH HOH . F 3 HOH B 6 126 13 HOH HOH . F 3 HOH B 7 127 17 HOH HOH . F 3 HOH B 8 128 22 HOH HOH . F 3 HOH B 9 129 23 HOH HOH . F 3 HOH B 10 130 24 HOH HOH . F 3 HOH B 11 131 25 HOH HOH . F 3 HOH B 12 132 26 HOH HOH . F 3 HOH B 13 133 28 HOH HOH . F 3 HOH B 14 134 29 HOH HOH . F 3 HOH B 15 135 30 HOH HOH . F 3 HOH B 16 136 46 HOH HOH . F 3 HOH B 17 137 47 HOH HOH . F 3 HOH B 18 138 48 HOH HOH . F 3 HOH B 19 139 57 HOH HOH . F 3 HOH B 20 140 59 HOH HOH . F 3 HOH B 21 141 60 HOH HOH . F 3 HOH B 22 142 61 HOH HOH . F 3 HOH B 23 143 63 HOH HOH . F 3 HOH B 24 144 64 HOH HOH . F 3 HOH B 25 145 65 HOH HOH . F 3 HOH B 26 146 66 HOH HOH . F 3 HOH B 27 147 68 HOH HOH . F 3 HOH B 28 148 69 HOH HOH . F 3 HOH B 29 149 70 HOH HOH . F 3 HOH B 30 150 71 HOH HOH . F 3 HOH B 31 151 72 HOH HOH . F 3 HOH B 32 152 73 HOH HOH . F 3 HOH B 33 153 75 HOH HOH . F 3 HOH B 34 154 76 HOH HOH . F 3 HOH B 35 155 78 HOH HOH . F 3 HOH B 36 156 79 HOH HOH . F 3 HOH B 37 157 85 HOH HOH . F 3 HOH B 38 158 86 HOH HOH . F 3 HOH B 39 159 87 HOH HOH . F 3 HOH B 40 160 88 HOH HOH . F 3 HOH B 41 161 89 HOH HOH . F 3 HOH B 42 162 90 HOH HOH . F 3 HOH B 43 163 91 HOH HOH . F 3 HOH B 44 164 92 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE HEC . . . C 2 7.163 49.402 1.112 1 18.13 ? FE HEC 120 A 1 HETATM 2 C CHA HEC . . . C 2 9.857 49.96 2.927 1 27.93 ? CHA HEC 120 A 1 HETATM 3 C CHB HEC . . . C 2 8.283 46.276 0.442 1 35.69 ? CHB HEC 120 A 1 HETATM 4 C CHC HEC . . . C 2 4.43 48.827 -0.735 1 13.61 ? CHC HEC 120 A 1 HETATM 5 C CHD HEC . . . C 2 6.064 52.447 1.723 1 18.96 ? CHD HEC 120 A 1 HETATM 6 N NA HEC . . . C 2 8.722 48.358 1.584 1 4.35 ? NA HEC 120 A 1 HETATM 7 C C1A HEC . . . C 2 9.74 48.766 2.383 1 12.96 ? C1A HEC 120 A 1 HETATM 8 C C2A HEC . . . C 2 10.729 47.722 2.514 1 9.77 ? C2A HEC 120 A 1 HETATM 9 C C3A HEC . . . C 2 10.323 46.67 1.828 1 10.38 ? C3A HEC 120 A 1 HETATM 10 C C4A HEC . . . C 2 9.076 47.045 1.241 1 20.22 ? C4A HEC 120 A 1 HETATM 11 C CMA HEC . . . C 2 11.006 45.334 1.669 1 14.64 ? CMA HEC 120 A 1 HETATM 12 C CAA HEC . . . C 2 11.988 47.84 3.326 1 11.26 ? CAA HEC 120 A 1 HETATM 13 C CBA HEC . . . C 2 13.077 48.456 2.458 1 10.3 ? CBA HEC 120 A 1 HETATM 14 C CGA HEC . . . C 2 14.528 48.533 3.004 1 25 ? CGA HEC 120 A 1 HETATM 15 O O1A HEC . . . C 2 14.678 47.997 4.066 1 31 ? O1A HEC 120 A 1 HETATM 16 O O2A HEC . . . C 2 15.427 49.04 2.402 1 22.56 ? O2A HEC 120 A 1 HETATM 17 N NB HEC . . . C 2 6.481 47.903 0.082 1 9.27 ? NB HEC 120 A 1 HETATM 18 C C1B HEC . . . C 2 7.117 46.695 -0.077 1 10.3 ? C1B HEC 120 A 1 HETATM 19 C C2B HEC . . . C 2 6.311 45.888 -0.92 1 17.55 ? C2B HEC 120 A 1 HETATM 20 C C3B HEC . . . C 2 5.278 46.622 -1.231 1 10.39 ? C3B HEC 120 A 1 HETATM 21 C C4B HEC . . . C 2 5.369 47.862 -0.609 1 15.91 ? C4B HEC 120 A 1 HETATM 22 C CMB HEC . . . C 2 6.652 44.436 -1.322 1 7.46 ? CMB HEC 120 A 1 HETATM 23 C CAB HEC . . . C 2 4.139 46.206 -2.016 1 35.39 ? CAB HEC 120 A 1 HETATM 24 C CBB HEC . . . C 2 3.309 45.018 -1.731 1 10.02 ? CBB HEC 120 A 1 HETATM 25 N NC HEC . . . C 2 5.571 50.394 0.589 1 17.11 ? NC HEC 120 A 1 HETATM 26 C C1C HEC . . . C 2 4.477 50.031 -0.185 1 15.46 ? C1C HEC 120 A 1 HETATM 27 C C2C HEC . . . C 2 3.492 51.064 -0.323 1 14.43 ? C2C HEC 120 A 1 HETATM 28 C C3C HEC . . . C 2 3.973 52.075 0.373 1 21.37 ? C3C HEC 120 A 1 HETATM 29 C C4C HEC . . . C 2 5.252 51.665 0.957 1 25.35 ? C4C HEC 120 A 1 HETATM 30 C CMC HEC . . . C 2 2.199 50.952 -1.126 1 7.45 ? CMC HEC 120 A 1 HETATM 31 C CAC HEC . . . C 2 3.357 53.417 0.575 1 20.51 ? CAC HEC 120 A 1 HETATM 32 C CBC HEC . . . C 2 2.03 53.712 1.205 1 18.19 ? CBC HEC 120 A 1 HETATM 33 N ND HEC . . . C 2 7.857 50.915 2.155 1 3.85 ? ND HEC 120 A 1 HETATM 34 C C1D HEC . . . C 2 7.269 52.147 2.268 1 21.73 ? C1D HEC 120 A 1 HETATM 35 C C2D HEC . . . C 2 8.131 52.991 3.124 1 3.17 ? C2D HEC 120 A 1 HETATM 36 C C3D HEC . . . C 2 9.19 52.269 3.418 1 7.37 ? C3D HEC 120 A 1 HETATM 37 C C4D HEC . . . C 2 8.997 50.994 2.829 1 15.5 ? C4D HEC 120 A 1 HETATM 38 C CMD HEC . . . C 2 7.845 54.41 3.544 1 11.48 ? CMD HEC 120 A 1 HETATM 39 C CAD HEC . . . C 2 10.307 52.68 4.313 1 9.5 ? CAD HEC 120 A 1 HETATM 40 C CBD HEC . . . C 2 10.008 52.005 5.678 1 11.05 ? CBD HEC 120 A 1 HETATM 41 C CGD HEC . . . C 2 10.305 52.745 6.948 1 20.48 ? CGD HEC 120 A 1 HETATM 42 O O1D HEC . . . C 2 9.823 52.489 8.031 1 27.07 ? O1D HEC 120 A 1 HETATM 43 O O2D HEC . . . C 2 11.152 53.657 6.831 1 18.69 ? O2D HEC 120 A 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 43 #