data_1C3B # _model_server_result.job_id hSdoYMXtDgoHkczyxBGOfQ _model_server_result.datetime_utc '2024-11-02 10:26:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1c3b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":362}' # _entry.id 1C3B # _exptl.entry_id 1C3B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 178.016 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BENZO[B]THIOPHENE-2-BORONIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.066 _cell.angle_gamma 90 _cell.entry_id 1C3B _cell.length_a 118.859 _cell.length_b 78.012 _cell.length_c 98.962 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1C3B _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A OG SER 61 A SER 64 1_555 C B BZB . A BZB 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.666 ? covale ? covale2 B OG SER 61 B SER 64 1_555 D B BZB . B BZB 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.659 ? # _chem_comp.formula 'C8 H7 B O2 S' _chem_comp.formula_weight 178.016 _chem_comp.id BZB _chem_comp.mon_nstd_flag . _chem_comp.name 'BENZO[B]THIOPHENE-2-BORONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1C3B _atom_sites.fract_transf_matrix[1][1] 0.008413 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004115 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012819 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011249 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BZB A 1 362 362 BZB BZB . D 2 BZB B 1 362 362 BZB BZB . E 3 HOH A 1 400 400 HOH H2O . E 3 HOH A 2 401 401 HOH H2O . E 3 HOH A 3 403 403 HOH H2O . E 3 HOH A 4 404 404 HOH H2O . E 3 HOH A 5 409 409 HOH H2O . E 3 HOH A 6 411 411 HOH H2O . E 3 HOH A 7 413 413 HOH H2O . E 3 HOH A 8 422 422 HOH H2O . E 3 HOH A 9 423 423 HOH H2O . E 3 HOH A 10 425 425 HOH H2O . E 3 HOH A 11 426 426 HOH H2O . E 3 HOH A 12 429 429 HOH H2O . E 3 HOH A 13 432 432 HOH H2O . E 3 HOH A 14 433 433 HOH H2O . E 3 HOH A 15 436 436 HOH H2O . E 3 HOH A 16 437 437 HOH H2O . E 3 HOH A 17 438 438 HOH H2O . E 3 HOH A 18 439 439 HOH H2O . E 3 HOH A 19 440 440 HOH H2O . E 3 HOH A 20 444 444 HOH H2O . E 3 HOH A 21 446 446 HOH H2O . E 3 HOH A 22 448 448 HOH H2O . E 3 HOH A 23 453 453 HOH H2O . E 3 HOH A 24 454 454 HOH H2O . E 3 HOH A 25 460 460 HOH H2O . E 3 HOH A 26 461 461 HOH H2O . E 3 HOH A 27 462 462 HOH H2O . E 3 HOH A 28 463 463 HOH H2O . E 3 HOH A 29 464 464 HOH H2O . E 3 HOH A 30 465 465 HOH H2O . E 3 HOH A 31 466 466 HOH H2O . E 3 HOH A 32 467 467 HOH H2O . E 3 HOH A 33 468 468 HOH H2O . E 3 HOH A 34 469 469 HOH H2O . E 3 HOH A 35 470 470 HOH H2O . E 3 HOH A 36 471 471 HOH H2O . E 3 HOH A 37 472 472 HOH H2O . E 3 HOH A 38 473 473 HOH H2O . E 3 HOH A 39 475 475 HOH H2O . E 3 HOH A 40 477 477 HOH H2O . E 3 HOH A 41 490 490 HOH H2O . E 3 HOH A 42 491 491 HOH H2O . E 3 HOH A 43 492 492 HOH H2O . F 3 HOH B 1 402 402 HOH H2O . F 3 HOH B 2 405 405 HOH H2O . F 3 HOH B 3 406 406 HOH H2O . F 3 HOH B 4 407 407 HOH H2O . F 3 HOH B 5 408 408 HOH H2O . F 3 HOH B 6 410 410 HOH H2O . F 3 HOH B 7 412 412 HOH H2O . F 3 HOH B 8 414 414 HOH H2O . F 3 HOH B 9 415 415 HOH H2O . F 3 HOH B 10 416 416 HOH H2O . F 3 HOH B 11 417 417 HOH H2O . F 3 HOH B 12 418 418 HOH H2O . F 3 HOH B 13 419 419 HOH H2O . F 3 HOH B 14 420 420 HOH H2O . F 3 HOH B 15 421 421 HOH H2O . F 3 HOH B 16 424 424 HOH H2O . F 3 HOH B 17 427 427 HOH H2O . F 3 HOH B 18 428 428 HOH H2O . F 3 HOH B 19 430 430 HOH H2O . F 3 HOH B 20 431 431 HOH H2O . F 3 HOH B 21 434 434 HOH H2O . F 3 HOH B 22 435 435 HOH H2O . F 3 HOH B 23 441 441 HOH H2O . F 3 HOH B 24 442 442 HOH H2O . F 3 HOH B 25 443 443 HOH H2O . F 3 HOH B 26 445 445 HOH H2O . F 3 HOH B 27 447 447 HOH H2O . F 3 HOH B 28 449 449 HOH H2O . F 3 HOH B 29 450 450 HOH H2O . F 3 HOH B 30 451 451 HOH H2O . F 3 HOH B 31 452 452 HOH H2O . F 3 HOH B 32 455 455 HOH H2O . F 3 HOH B 33 456 456 HOH H2O . F 3 HOH B 34 457 457 HOH H2O . F 3 HOH B 35 458 458 HOH H2O . F 3 HOH B 36 459 459 HOH H2O . F 3 HOH B 37 474 474 HOH H2O . F 3 HOH B 38 476 476 HOH H2O . F 3 HOH B 39 478 478 HOH H2O . F 3 HOH B 40 479 479 HOH H2O . F 3 HOH B 41 480 480 HOH H2O . F 3 HOH B 42 481 481 HOH H2O . F 3 HOH B 43 482 482 HOH H2O . F 3 HOH B 44 483 483 HOH H2O . F 3 HOH B 45 484 484 HOH H2O . F 3 HOH B 46 485 485 HOH H2O . F 3 HOH B 47 486 486 HOH H2O . F 3 HOH B 48 487 487 HOH H2O . F 3 HOH B 49 488 488 HOH H2O . F 3 HOH B 50 489 489 HOH H2O . F 3 HOH B 51 493 493 HOH H2O . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 B B BZB . . . D 2 77.485 4.512 28.805 1 16.5 ? B BZB 362 B 1 HETATM 2 O O1 BZB . . . D 2 77.376 5.319 27.577 1 16.49 ? O1 BZB 362 B 1 HETATM 3 O O2 BZB . . . D 2 78.452 3.498 28.841 1 16.04 ? O2 BZB 362 B 1 HETATM 4 C C1 BZB . . . D 2 78.024 5.514 29.889 1 20.76 ? C1 BZB 362 B 1 HETATM 5 C C2 BZB . . . D 2 78.515 6.753 29.642 1 15.17 ? C2 BZB 362 B 1 HETATM 6 C C8 BZB . . . D 2 78.825 6.521 31.951 1 28.83 ? C8 BZB 362 B 1 HETATM 7 C C3 BZB . . . D 2 78.994 7.334 30.877 1 25.03 ? C3 BZB 362 B 1 HETATM 8 C C7 BZB . . . D 2 79.241 6.912 33.298 1 28.11 ? C7 BZB 362 B 1 HETATM 9 S S BZB . . . D 2 78.109 5.037 31.557 1 29.75 ? S BZB 362 B 1 HETATM 10 C C4 BZB . . . D 2 79.59 8.626 31.074 1 28.24 ? C4 BZB 362 B 1 HETATM 11 C C6 BZB . . . D 2 79.819 8.17 33.486 1 25.13 ? C6 BZB 362 B 1 HETATM 12 C C5 BZB . . . D 2 79.995 9.025 32.377 1 30.53 ? C5 BZB 362 B 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 217 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 12 #