data_1C4U # _model_server_result.job_id IfbVdWzZTcsoXsHB217sig _model_server_result.datetime_utc '2024-12-27 01:12:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1c4u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":370}' # _entry.id 1C4U # _exptl.entry_id 1C4U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 581.483 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-[2-(4-BROMO-BENZENESULFONYL)-ETHYL]-1-3-DIOXO-2,3,5,8-TETRAHYDRO-1H-[1,2,4]TRIAZOLO[1,2-A]PYRIDAZINE-5-CARBOXYLIC ACID(4-CARBAMIMIDOYL-CYCLOHEXYLMETHYL)-AMIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.8 _cell.angle_gamma 90 _cell.entry_id 1C4U _cell.length_a 71.51 _cell.length_b 72.02 _cell.length_c 72.91 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1C4U _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 9 1 CYS 1 1_555 B SG CYS 119 2 CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.982 ? disulf ? disulf2 B SG CYS 28 2 CYS 42 1_555 B SG CYS 44 2 CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? disulf ? disulf3 B SG CYS 173 2 CYS 168 1_555 B SG CYS 187 2 CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? disulf ? disulf4 B SG CYS 201 2 CYS 191 1_555 B SG CYS 231 2 CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? covale ? covale1 C C GLU 13 3 GLU 566 1_555 C N TYS 14 3 TYS 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? metalc ? metalc1 B O ARG 233 2 ARG 221 1_555 D NA NA . 2 NA 550 1_555 A ? ? ? ? ? ? ? ? ? ? ? 2.713 ? metalc ? metalc2 B O LYS 236 2 LYS 224 1_555 D NA NA . 2 NA 550 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc3 G O HOH . 2 HOH 522 1_555 D NA NA . 2 NA 550 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.784 ? # _chem_comp.formula 'C23 H29 Br N6 O5 S' _chem_comp.formula_weight 581.483 _chem_comp.id IH1 _chem_comp.mon_nstd_flag . _chem_comp.name '2-[2-(4-BROMO-BENZENESULFONYL)-ETHYL]-1-3-DIOXO-2,3,5,8-TETRAHYDRO-1H-[1,2,4]TRIAZOLO[1,2-A]PYRIDAZINE-5-CARBOXYLIC ACID(4-CARBAMIMIDOYL-CYCLOHEXYLMETHYL)-AMIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C27 C28 IH1 doub 152 n y C27 C26 IH1 sing 153 n y C27 BR IH1 sing 154 n n C28 C29 IH1 sing 155 n y C28 HC28 IH1 sing 156 n n C29 C24 IH1 doub 157 n y C29 HC29 IH1 sing 158 n n C24 C25 IH1 sing 159 n y C24 S IH1 sing 160 n n C25 C26 IH1 doub 161 n y C25 HC25 IH1 sing 162 n n C26 HC26 IH1 sing 163 n n S O1 IH1 doub 164 n n S O2 IH1 doub 165 n n S C23 IH1 sing 166 n n C23 C22 IH1 sing 167 n n C23 H231 IH1 sing 168 n n C23 H232 IH1 sing 169 n n C22 N20 IH1 sing 170 n n C22 H221 IH1 sing 171 n n C22 H222 IH1 sing 172 n n C13 C14 IH1 sing 173 n n C13 N18 IH1 sing 174 n n C13 C12 IH1 sing 175 n n C13 HC13 IH1 sing 176 n n C14 C15 IH1 doub 177 n n C14 HC14 IH1 sing 178 n n C15 C16 IH1 sing 179 n n C15 HC15 IH1 sing 180 n n C16 N17 IH1 sing 181 n n C16 H161 IH1 sing 182 n n C16 H162 IH1 sing 183 n n C19 N17 IH1 sing 184 n y C19 O19 IH1 doub 185 n n C19 N20 IH1 sing 186 n y C21 N18 IH1 sing 187 n y C21 O21 IH1 doub 188 n n C21 N20 IH1 sing 189 n y N17 N18 IH1 sing 190 n y C12 O12 IH1 doub 191 n n C12 N9 IH1 sing 192 n n C1 C2 IH1 sing 193 n n C1 N9 IH1 sing 194 n n C1 HC11 IH1 sing 195 n n C1 HC12 IH1 sing 196 n n C2 C3 IH1 sing 197 n n C2 C7 IH1 sing 198 n n C2 HC2 IH1 sing 199 n n C3 C4 IH1 sing 200 n n C3 HC31 IH1 sing 201 n n C3 HC32 IH1 sing 202 n n C4 C5 IH1 sing 203 n n C4 HC41 IH1 sing 204 n n C4 HC42 IH1 sing 205 n n C5 C6 IH1 sing 206 n n C5 C8 IH1 sing 207 n n C5 HC5 IH1 sing 208 n n C6 C7 IH1 sing 209 n n C6 HC61 IH1 sing 210 n n C6 HC62 IH1 sing 211 n n N9 HN9 IH1 sing 212 n n C7 HC71 IH1 sing 213 n n C7 HC72 IH1 sing 214 n n C8 N11 IH1 sing 215 n n C8 N10 IH1 doub 216 n n N11 H111 IH1 sing 217 n n N11 H112 IH1 sing 218 n n N10 HN10 IH1 sing 219 n n # _atom_sites.entry_id 1C4U _atom_sites.fract_transf_matrix[1][1] 0.013984 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002668 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013885 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013963 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NA 2 1 550 550 NA NA . E 5 IH1 2 1 370 370 IH1 IH1 . F 6 HOH 1 1 427 427 HOH HOH . F 6 HOH 1 2 432 432 HOH HOH . F 6 HOH 1 3 445 445 HOH HOH . F 6 HOH 1 4 447 447 HOH HOH . F 6 HOH 1 5 459 459 HOH HOH . F 6 HOH 1 6 460 460 HOH HOH . F 6 HOH 1 7 505 505 HOH HOH . F 6 HOH 1 8 520 520 HOH HOH . G 6 HOH 2 1 400 400 HOH HOH . G 6 HOH 2 2 401 401 HOH HOH . G 6 HOH 2 3 402 402 HOH HOH . G 6 HOH 2 4 403 403 HOH HOH . G 6 HOH 2 5 404 404 HOH HOH . G 6 HOH 2 6 405 405 HOH HOH . G 6 HOH 2 7 406 406 HOH HOH . G 6 HOH 2 8 407 407 HOH HOH . G 6 HOH 2 9 409 409 HOH HOH . G 6 HOH 2 10 410 410 HOH HOH . G 6 HOH 2 11 411 411 HOH HOH . G 6 HOH 2 12 413 413 HOH HOH . G 6 HOH 2 13 414 414 HOH HOH . G 6 HOH 2 14 415 415 HOH HOH . G 6 HOH 2 15 416 416 HOH HOH . G 6 HOH 2 16 418 418 HOH HOH . G 6 HOH 2 17 419 419 HOH HOH . G 6 HOH 2 18 420 420 HOH HOH . G 6 HOH 2 19 421 421 HOH HOH . G 6 HOH 2 20 422 422 HOH HOH . G 6 HOH 2 21 423 423 HOH HOH . G 6 HOH 2 22 425 425 HOH HOH . G 6 HOH 2 23 426 426 HOH HOH . G 6 HOH 2 24 428 428 HOH HOH . G 6 HOH 2 25 429 429 HOH HOH . G 6 HOH 2 26 431 431 HOH HOH . G 6 HOH 2 27 433 433 HOH HOH . G 6 HOH 2 28 434 434 HOH HOH . G 6 HOH 2 29 435 435 HOH HOH . G 6 HOH 2 30 436 436 HOH HOH . G 6 HOH 2 31 437 437 HOH HOH . G 6 HOH 2 32 438 438 HOH HOH . G 6 HOH 2 33 439 439 HOH HOH . G 6 HOH 2 34 440 440 HOH HOH . G 6 HOH 2 35 441 441 HOH HOH . G 6 HOH 2 36 442 442 HOH HOH . G 6 HOH 2 37 443 443 HOH HOH . G 6 HOH 2 38 444 444 HOH HOH . G 6 HOH 2 39 446 446 HOH HOH . G 6 HOH 2 40 448 448 HOH HOH . G 6 HOH 2 41 449 449 HOH HOH . G 6 HOH 2 42 450 450 HOH HOH . G 6 HOH 2 43 451 451 HOH HOH . G 6 HOH 2 44 452 452 HOH HOH . G 6 HOH 2 45 453 453 HOH HOH . G 6 HOH 2 46 454 454 HOH HOH . G 6 HOH 2 47 455 455 HOH HOH . G 6 HOH 2 48 456 456 HOH HOH . G 6 HOH 2 49 457 457 HOH HOH . G 6 HOH 2 50 458 458 HOH HOH . G 6 HOH 2 51 461 461 HOH HOH . G 6 HOH 2 52 462 462 HOH HOH . G 6 HOH 2 53 463 463 HOH HOH . G 6 HOH 2 54 464 464 HOH HOH . G 6 HOH 2 55 465 465 HOH HOH . G 6 HOH 2 56 502 502 HOH HOH . G 6 HOH 2 57 503 503 HOH HOH . G 6 HOH 2 58 504 504 HOH HOH . G 6 HOH 2 59 506 506 HOH HOH . G 6 HOH 2 60 507 507 HOH HOH . G 6 HOH 2 61 508 508 HOH HOH . G 6 HOH 2 62 510 510 HOH HOH . G 6 HOH 2 63 512 512 HOH HOH . G 6 HOH 2 64 514 514 HOH HOH . G 6 HOH 2 65 515 515 HOH HOH . G 6 HOH 2 66 516 516 HOH HOH . G 6 HOH 2 67 517 517 HOH HOH . G 6 HOH 2 68 518 518 HOH HOH . G 6 HOH 2 69 519 519 HOH HOH . G 6 HOH 2 70 521 521 HOH HOH . G 6 HOH 2 71 522 522 HOH HOH . G 6 HOH 2 72 523 523 HOH HOH . G 6 HOH 2 73 524 524 HOH HOH . G 6 HOH 2 74 526 526 HOH HOH . G 6 HOH 2 75 527 527 HOH HOH . G 6 HOH 2 76 528 528 HOH HOH . G 6 HOH 2 77 529 529 HOH HOH . G 6 HOH 2 78 530 530 HOH HOH . G 6 HOH 2 79 531 531 HOH HOH . G 6 HOH 2 80 532 532 HOH HOH . G 6 HOH 2 81 533 533 HOH HOH . G 6 HOH 2 82 534 534 HOH HOH . G 6 HOH 2 83 535 535 HOH HOH . G 6 HOH 2 84 536 536 HOH HOH . G 6 HOH 2 85 537 537 HOH HOH . H 6 HOH 3 1 430 430 HOH HOH . H 6 HOH 3 2 525 525 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C27 IH1 . . . E 5 21.914 -15.087 25.581 1 50 ? C27 IH1 370 2 1 HETATM 2 C C28 IH1 . . . E 5 21.048 -14.319 26.212 1 48.73 ? C28 IH1 370 2 1 HETATM 3 C C29 IH1 . . . E 5 19.891 -14.951 26.514 1 45.51 ? C29 IH1 370 2 1 HETATM 4 C C24 IH1 . . . E 5 19.646 -16.265 26.141 1 43.58 ? C24 IH1 370 2 1 HETATM 5 C C25 IH1 . . . E 5 20.503 -16.976 25.441 1 45.71 ? C25 IH1 370 2 1 HETATM 6 C C26 IH1 . . . E 5 21.675 -16.391 25.133 1 48.93 ? C26 IH1 370 2 1 HETATM 7 BR BR IH1 . . . E 5 23.442 -14.321 25.125 1 50 ? BR IH1 370 2 1 HETATM 8 S S IH1 . . . E 5 18.16 -17.102 26.432 1 41.11 ? S IH1 370 2 1 HETATM 9 O O1 IH1 . . . E 5 17.228 -16.025 26.736 1 42.6 ? O1 IH1 370 2 1 HETATM 10 O O2 IH1 . . . E 5 18.444 -17.982 27.584 1 41.13 ? O2 IH1 370 2 1 HETATM 11 C C23 IH1 . . . E 5 17.648 -17.986 25.022 1 37.85 ? C23 IH1 370 2 1 HETATM 12 C C22 IH1 . . . E 5 17.059 -17.123 23.81 1 33.89 ? C22 IH1 370 2 1 HETATM 13 C C13 IH1 . . . E 5 18.477 -13.014 21.747 1 29.69 ? C13 IH1 370 2 1 HETATM 14 C C14 IH1 . . . E 5 19.729 -12.877 21.112 1 30.31 ? C14 IH1 370 2 1 HETATM 15 C C15 IH1 . . . E 5 20.689 -13.744 20.815 1 29.86 ? C15 IH1 370 2 1 HETATM 16 C C16 IH1 . . . E 5 20.455 -15.158 21.298 1 30.37 ? C16 IH1 370 2 1 HETATM 17 C C19 IH1 . . . E 5 19.029 -16.453 22.689 1 30.74 ? C19 IH1 370 2 1 HETATM 18 C C21 IH1 . . . E 5 17.57 -14.864 23.045 1 29.71 ? C21 IH1 370 2 1 HETATM 19 N N17 IH1 . . . E 5 19.29 -15.297 21.961 1 30.04 ? N17 IH1 370 2 1 HETATM 20 N N18 IH1 . . . E 5 18.534 -14.287 22.435 1 29.4 ? N18 IH1 370 2 1 HETATM 21 O O21 IH1 . . . E 5 16.586 -14.392 23.375 1 29.22 ? O21 IH1 370 2 1 HETATM 22 O O19 IH1 . . . E 5 19.775 -17.408 22.583 1 30.16 ? O19 IH1 370 2 1 HETATM 23 N N20 IH1 . . . E 5 17.895 -16.205 23.218 1 31.12 ? N20 IH1 370 2 1 HETATM 24 C C12 IH1 . . . E 5 17.188 -12.681 20.705 1 29.66 ? C12 IH1 370 2 1 HETATM 25 O O12 IH1 . . . E 5 17.375 -12.198 19.528 1 32.35 ? O12 IH1 370 2 1 HETATM 26 C C1 IH1 . . . E 5 14.876 -12.188 20.448 1 23.75 ? C1 IH1 370 2 1 HETATM 27 C C2 IH1 . . . E 5 13.635 -12.018 21.112 1 21.74 ? C2 IH1 370 2 1 HETATM 28 C C3 IH1 . . . E 5 13.126 -10.671 21.583 1 19.87 ? C3 IH1 370 2 1 HETATM 29 C C4 IH1 . . . E 5 11.944 -10.779 22.369 1 20.57 ? C4 IH1 370 2 1 HETATM 30 C C5 IH1 . . . E 5 12.241 -11.602 23.721 1 19.56 ? C5 IH1 370 2 1 HETATM 31 C C6 IH1 . . . E 5 12.593 -12.982 23.089 1 20.07 ? C6 IH1 370 2 1 HETATM 32 N N9 IH1 . . . E 5 15.823 -12.469 20.99 1 27.25 ? N9 IH1 370 2 1 HETATM 33 C C7 IH1 . . . E 5 13.551 -13.173 22.148 1 19.52 ? C7 IH1 370 2 1 HETATM 34 C C8 IH1 . . . E 5 10.975 -11.81 24.271 1 19.75 ? C8 IH1 370 2 1 HETATM 35 N N11 IH1 . . . E 5 10.373 -12.934 24.21 1 18.65 ? N11 IH1 370 2 1 HETATM 36 N N10 IH1 . . . E 5 10.499 -10.827 24.997 1 21.38 ? N10 IH1 370 2 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 482 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 36 #