data_1C4Y # _model_server_result.job_id t3mpQbjvyrIK0wCtYdL8Rg _model_server_result.datetime_utc '2025-04-23 01:36:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1c4y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":370}' # _entry.id 1C4Y # _exptl.entry_id 1C4Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 553.655 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(2,2-DIPHENYL-ETHYL)-7-METHYL-1,3-DIOXO-2,3,5,8-TETRAHYDRO-1H-[1,2,4] TRIAZOLO[1,2-A]PYRIDAZINE-5-CARBOXYLIC ACID [4-(2-AMINO-3H-IMIDAZOL-4-YL)-CYCLOHEXYL]-AMIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1C4Y _cell.length_a 93.1 _cell.length_b 93.1 _cell.length_c 95.29 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1C4Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 9 1 CYS 1 1_555 B SG CYS 119 2 CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? disulf ? disulf2 B SG CYS 28 2 CYS 42 1_555 B SG CYS 44 2 CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? disulf ? disulf3 B SG CYS 173 2 CYS 168 1_555 B SG CYS 187 2 CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? disulf ? disulf4 B SG CYS 201 2 CYS 191 1_555 B SG CYS 231 2 CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? covale ? covale1 C C GLU 11 3 GLU 566 1_555 C N TYS 12 3 TYS 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 C C TYS 12 3 TYS 567 1_555 C N LEU 13 3 LEU 568 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.307 ? # _chem_comp.formula 'C31 H35 N7 O3' _chem_comp.formula_weight 553.655 _chem_comp.id IH3 _chem_comp.mon_nstd_flag . _chem_comp.name '2-(2,2-DIPHENYL-ETHYL)-7-METHYL-1,3-DIOXO-2,3,5,8-TETRAHYDRO-1H-[1,2,4] TRIAZOLO[1,2-A]PYRIDAZINE-5-CARBOXYLIC ACID [4-(2-AMINO-3H-IMIDAZOL-4-YL)-CYCLOHEXYL]-AMIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 NC IH3 sing 152 n y C1 C2 IH3 doub 153 n y C1 C5 IH3 sing 154 n n NC C3 IH3 sing 155 n y NC HNC IH3 sing 156 n n C3 NA IH3 doub 157 n y C3 NB IH3 sing 158 n n NA C2 IH3 sing 159 n y C2 HC2 IH3 sing 160 n n NB HNB1 IH3 sing 161 n n NB HNB2 IH3 sing 162 n n N10 C8 IH3 sing 163 n n N10 C11 IH3 sing 164 n n N10 HN10 IH3 sing 165 n n C7 C8 IH3 sing 166 n n C7 C6 IH3 sing 167 n n C7 HC71 IH3 sing 168 n n C7 HC72 IH3 sing 169 n n C8 C9 IH3 sing 170 n n C8 HC8 IH3 sing 171 n n C9 C4 IH3 sing 172 n n C9 HC91 IH3 sing 173 n n C9 HC92 IH3 sing 174 n n C4 C5 IH3 sing 175 n n C4 HC41 IH3 sing 176 n n C4 HC42 IH3 sing 177 n n C5 C6 IH3 sing 178 n n C5 HC5 IH3 sing 179 n n C6 HC61 IH3 sing 180 n n C6 HC62 IH3 sing 181 n n N20 C19 IH3 sing 182 n y N20 C21 IH3 sing 183 n y N20 C22 IH3 sing 184 n n C19 O19 IH3 doub 185 n n C19 N17 IH3 sing 186 n y N17 N18 IH3 sing 187 n y N17 C16 IH3 sing 188 n n N18 C21 IH3 sing 189 n y N18 C12 IH3 sing 190 n n C21 O21 IH3 doub 191 n n C16 C14 IH3 sing 192 n n C16 H161 IH3 sing 193 n n C16 H162 IH3 sing 194 n n C14 C13 IH3 doub 195 n n C14 C15 IH3 sing 196 n n C13 C12 IH3 sing 197 n n C13 HC13 IH3 sing 198 n n C12 C11 IH3 sing 199 n n C12 HC12 IH3 sing 200 n n C15 H151 IH3 sing 201 n n C15 H152 IH3 sing 202 n n C15 H153 IH3 sing 203 n n C11 O11 IH3 doub 204 n n C23 C22 IH3 sing 205 n n C23 C24 IH3 sing 206 n n C23 C30 IH3 sing 207 n n C23 HC23 IH3 sing 208 n n C22 H221 IH3 sing 209 n n C22 H222 IH3 sing 210 n n C24 C25 IH3 doub 211 n y C24 C29 IH3 sing 212 n y C25 C26 IH3 sing 213 n y C25 HC25 IH3 sing 214 n n C26 C27 IH3 doub 215 n y C26 HC26 IH3 sing 216 n n C27 C28 IH3 sing 217 n y C27 HC27 IH3 sing 218 n n C28 C29 IH3 doub 219 n y C28 HC28 IH3 sing 220 n n C29 HC29 IH3 sing 221 n n C30 C31 IH3 doub 222 n y C30 C35 IH3 sing 223 n y C31 C32 IH3 sing 224 n y C31 HC31 IH3 sing 225 n n C32 C33 IH3 doub 226 n y C32 HC32 IH3 sing 227 n n C33 C34 IH3 sing 228 n y C33 HC33 IH3 sing 229 n n C34 C35 IH3 doub 230 n y C34 HC34 IH3 sing 231 n n C35 HC35 IH3 sing 232 n n # _atom_sites.entry_id 1C4Y _atom_sites.fract_transf_matrix[1][1] 0.010741 _atom_sites.fract_transf_matrix[1][2] 0.006201 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012403 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010494 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 IH3 2 1 370 369 IH3 AIM . E 5 HOH 2 1 550 550 HOH HOH . E 5 HOH 2 2 551 551 HOH HOH . E 5 HOH 2 3 552 552 HOH HOH . E 5 HOH 2 4 553 553 HOH HOH . E 5 HOH 2 5 554 554 HOH HOH . E 5 HOH 2 6 555 555 HOH HOH . E 5 HOH 2 7 556 556 HOH HOH . E 5 HOH 2 8 557 557 HOH HOH . E 5 HOH 2 9 558 558 HOH HOH . E 5 HOH 2 10 559 559 HOH HOH . E 5 HOH 2 11 560 560 HOH HOH . E 5 HOH 2 12 561 561 HOH HOH . E 5 HOH 2 13 562 562 HOH HOH . E 5 HOH 2 14 563 563 HOH HOH . E 5 HOH 2 15 564 564 HOH HOH . E 5 HOH 2 16 565 565 HOH HOH . E 5 HOH 2 17 566 566 HOH HOH . E 5 HOH 2 18 567 567 HOH HOH . E 5 HOH 2 19 568 568 HOH HOH . E 5 HOH 2 20 570 570 HOH HOH . E 5 HOH 2 21 571 571 HOH HOH . E 5 HOH 2 22 572 572 HOH HOH . E 5 HOH 2 23 573 573 HOH HOH . E 5 HOH 2 24 574 574 HOH HOH . E 5 HOH 2 25 575 575 HOH HOH . E 5 HOH 2 26 576 576 HOH HOH . E 5 HOH 2 27 577 577 HOH HOH . E 5 HOH 2 28 578 578 HOH HOH . E 5 HOH 2 29 579 579 HOH HOH . E 5 HOH 2 30 580 580 HOH HOH . E 5 HOH 2 31 581 581 HOH HOH . E 5 HOH 2 32 582 582 HOH HOH . E 5 HOH 2 33 583 583 HOH HOH . E 5 HOH 2 34 584 584 HOH HOH . E 5 HOH 2 35 585 585 HOH HOH . E 5 HOH 2 36 586 586 HOH HOH . E 5 HOH 2 37 587 587 HOH HOH . E 5 HOH 2 38 588 588 HOH HOH . E 5 HOH 2 39 589 589 HOH HOH . E 5 HOH 2 40 590 590 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IH3 . . . D 4 25.345 48.591 -4.832 1 24.99 ? C1 IH3 370 2 1 HETATM 2 N NC IH3 . . . D 4 24.507 48.316 -3.752 1 25.8 ? NC IH3 370 2 1 HETATM 3 C C3 IH3 . . . D 4 23.447 47.607 -4.192 1 29.26 ? C3 IH3 370 2 1 HETATM 4 N NA IH3 . . . D 4 23.597 47.43 -5.507 1 30.25 ? NA IH3 370 2 1 HETATM 5 C C2 IH3 . . . D 4 24.742 48.016 -5.925 1 28.97 ? C2 IH3 370 2 1 HETATM 6 N NB IH3 . . . D 4 22.44 47.161 -3.46 1 28.12 ? NB IH3 370 2 1 HETATM 7 N N10 IH3 . . . D 4 29.062 50.846 -4.202 1 18.28 ? N10 IH3 370 2 1 HETATM 8 C C7 IH3 . . . D 4 27.585 51.606 -5.76 1 20.65 ? C7 IH3 370 2 1 HETATM 9 C C8 IH3 . . . D 4 29.009 50.955 -5.439 1 18.7 ? C8 IH3 370 2 1 HETATM 10 C C9 IH3 . . . D 4 28.978 49.454 -5.854 1 19.88 ? C9 IH3 370 2 1 HETATM 11 C C4 IH3 . . . D 4 27.604 48.7 -5.817 1 17.54 ? C4 IH3 370 2 1 HETATM 12 C C5 IH3 . . . D 4 26.589 49.325 -4.769 1 19.99 ? C5 IH3 370 2 1 HETATM 13 C C6 IH3 . . . D 4 26.35 50.783 -5.097 1 17.54 ? C6 IH3 370 2 1 HETATM 14 N N20 IH3 . . . D 4 33.076 49.052 -2.208 1 16.43 ? N20 IH3 370 2 1 HETATM 15 C C19 IH3 . . . D 4 33.751 50.219 -1.862 1 16.21 ? C19 IH3 370 2 1 HETATM 16 O O19 IH3 . . . D 4 35.005 50.312 -1.728 1 22.01 ? O19 IH3 370 2 1 HETATM 17 N N17 IH3 . . . D 4 32.757 51.17 -1.61 1 18.29 ? N17 IH3 370 2 1 HETATM 18 N N18 IH3 . . . D 4 31.486 50.567 -1.893 1 15.91 ? N18 IH3 370 2 1 HETATM 19 C C21 IH3 . . . D 4 31.717 49.264 -2.303 1 16.75 ? C21 IH3 370 2 1 HETATM 20 O O21 IH3 . . . D 4 30.853 48.416 -2.598 1 14.97 ? O21 IH3 370 2 1 HETATM 21 C C16 IH3 . . . D 4 32.911 52.516 -1.258 1 21.69 ? C16 IH3 370 2 1 HETATM 22 C C14 IH3 . . . D 4 31.555 53.247 -1.227 1 24.15 ? C14 IH3 370 2 1 HETATM 23 C C13 IH3 . . . D 4 30.357 52.645 -1.496 1 24 ? C13 IH3 370 2 1 HETATM 24 C C12 IH3 . . . D 4 30.338 51.293 -2.231 1 20.33 ? C12 IH3 370 2 1 HETATM 25 C C15 IH3 . . . D 4 31.519 54.761 -0.868 1 26.56 ? C15 IH3 370 2 1 HETATM 26 C C11 IH3 . . . D 4 30.104 51.494 -3.653 1 20.02 ? C11 IH3 370 2 1 HETATM 27 O O11 IH3 . . . D 4 30.907 52.159 -4.314 1 28.41 ? O11 IH3 370 2 1 HETATM 28 C C23 IH3 . . . D 4 33.409 46.544 -1.668 1 16.47 ? C23 IH3 370 2 1 HETATM 29 C C22 IH3 . . . D 4 33.859 47.582 -2.643 1 14.47 ? C22 IH3 370 2 1 HETATM 30 C C24 IH3 . . . D 4 33.617 47.011 -0.225 1 18 ? C24 IH3 370 2 1 HETATM 31 C C25 IH3 . . . D 4 32.469 46.998 0.633 1 17 ? C25 IH3 370 2 1 HETATM 32 C C26 IH3 . . . D 4 32.591 47.467 2.017 1 18.5 ? C26 IH3 370 2 1 HETATM 33 C C27 IH3 . . . D 4 33.863 47.973 2.597 1 17.55 ? C27 IH3 370 2 1 HETATM 34 C C28 IH3 . . . D 4 35.048 48.004 1.742 1 17.12 ? C28 IH3 370 2 1 HETATM 35 C C29 IH3 . . . D 4 34.926 47.526 0.34 1 18 ? C29 IH3 370 2 1 HETATM 36 C C30 IH3 . . . D 4 34.078 45.204 -2.016 1 14.43 ? C30 IH3 370 2 1 HETATM 37 C C31 IH3 . . . D 4 33.228 44.103 -2.444 1 17.67 ? C31 IH3 370 2 1 HETATM 38 C C32 IH3 . . . D 4 33.904 42.689 -2.766 1 15.86 ? C32 IH3 370 2 1 HETATM 39 C C33 IH3 . . . D 4 35.328 42.415 -2.651 1 10.5 ? C33 IH3 370 2 1 HETATM 40 C C34 IH3 . . . D 4 36.17 43.507 -2.252 1 18.92 ? C34 IH3 370 2 1 HETATM 41 C C35 IH3 . . . D 4 35.59 44.866 -1.927 1 14.07 ? C35 IH3 370 2 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 349 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 41 #