data_1C51 # _model_server_result.job_id JQxHSJHTKCaCCwSo-QMxpw _model_server_result.datetime_utc '2024-12-26 18:07:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1c51 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"RB","auth_seq_id":649}' # _entry.id 1C51 # _exptl.entry_id 1C51 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 893.489 _entity.id 9 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLOROPHYLL A' _entity.pdbx_number_of_molecules 72 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1C51 _cell.length_a 286 _cell.length_b 286 _cell.length_c 167 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1C51 _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 24-meric _pdbx_struct_assembly.oligomeric_count 24 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB,ZB,AC,BC,CC,DC,EC,FC,GC _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 286 0 0 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 143 247.683265 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 9 I N N ? 9 J N N ? 9 K N N ? 9 N N N ? 9 O N N ? 9 P N N ? 9 Q N N ? 9 R N N ? 9 S N N ? 9 T N N ? 9 U N N ? 9 V N N ? 9 W N N ? 9 X N N ? 9 Y N N ? 9 Z N N ? 9 AA N N ? 9 BA N N ? 9 CA N N ? 9 DA N N ? 9 EA N N ? 9 FA N N ? 9 GA N N ? 9 HA N N ? 9 IA N N ? 9 JA N N ? 9 KA N N ? 9 LA N N ? 9 MA N N ? 9 NA N N ? 9 OA N N ? 9 PA N N ? 9 QA N N ? 9 SA N N ? 9 TA N N ? 9 UA N N ? 9 VA N N ? 9 WA N N ? 9 XA N N ? 9 YA N N ? 9 ZA N N ? 9 AB N N ? 9 BB N N ? 9 CB N N ? 9 DB N N ? 9 EB N N ? 9 FB N N ? 9 GB N N ? 9 HB N N ? 9 IB N N ? 9 JB N N ? 9 KB N N ? 9 LB N N ? 9 MB N N ? 9 NB N N ? 9 OB N N ? 9 PB N N ? 9 QB N N ? 9 RB N N ? 9 SB N N ? 9 TB N N ? 9 UB N N ? 9 VB N N ? 9 YB N N ? 9 ZB N N ? 9 AC N N ? 9 BC N N ? 9 CC N N ? 9 DC N N ? 9 EC N N ? 9 FC N N ? 9 GC N N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id CA _struct_conn.ptnr1_label_comp_id UNK _struct_conn.ptnr1_label_seq_id 454 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id UNK _struct_conn.ptnr1_auth_seq_id 454 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id M _struct_conn.ptnr2_label_atom_id FE2 _struct_conn.ptnr2_label_comp_id SF4 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id SF4 _struct_conn.ptnr2_auth_seq_id 602 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.128 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C55 H72 Mg N4 O5' _chem_comp.formula_weight 893.489 _chem_comp.id CLA _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLOROPHYLL A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag MG NA CLA sing 1 n n MG NB CLA sing 2 n n MG NC CLA sing 3 n n MG ND CLA sing 4 n n CHA C1A CLA sing 5 n n CHA C4D CLA doub 6 n n CHA CBD CLA sing 7 n n CHB C4A CLA doub 8 n n CHB C1B CLA sing 9 n n CHB HHB CLA sing 10 n n CHC C4B CLA sing 11 n n CHC C1C CLA doub 12 n n CHC HHC CLA sing 13 n n CHD C4C CLA sing 14 n n CHD C1D CLA doub 15 n n CHD HHD CLA sing 16 n n NA C1A CLA doub 17 n n NA C4A CLA sing 18 n n C1A C2A CLA sing 19 n n C2A C3A CLA sing 20 n n C2A CAA CLA sing 21 n n C2A H2A CLA sing 22 n n C3A C4A CLA sing 23 n n C3A CMA CLA sing 24 n n C3A H3A CLA sing 25 n n CMA HMA1 CLA sing 26 n n CMA HMA2 CLA sing 27 n n CMA HMA3 CLA sing 28 n n CAA CBA CLA sing 29 n n CAA HAA1 CLA sing 30 n n CAA HAA2 CLA sing 31 n n CBA CGA CLA sing 32 n n CBA HBA1 CLA sing 33 n n CBA HBA2 CLA sing 34 n n CGA O1A CLA doub 35 n n CGA O2A CLA sing 36 n n O2A C1 CLA sing 37 n n NB C1B CLA sing 38 n y NB C4B CLA sing 39 n y C1B C2B CLA doub 40 n y C2B C3B CLA sing 41 n y C2B CMB CLA sing 42 n n C3B C4B CLA doub 43 n y C3B CAB CLA sing 44 n n CMB HMB1 CLA sing 45 n n CMB HMB2 CLA sing 46 n n CMB HMB3 CLA sing 47 n n CAB CBB CLA doub 48 n n CAB HAB CLA sing 49 n n CBB HBB1 CLA sing 50 n n CBB HBB2 CLA sing 51 n n NC C1C CLA sing 52 n n NC C4C CLA doub 53 n n C1C C2C CLA sing 54 n n C2C C3C CLA doub 55 n n C2C CMC CLA sing 56 n n C3C C4C CLA sing 57 n n C3C CAC CLA sing 58 n n CMC HMC1 CLA sing 59 n n CMC HMC2 CLA sing 60 n n CMC HMC3 CLA sing 61 n n CAC CBC CLA sing 62 n n CAC HAC1 CLA sing 63 n n CAC HAC2 CLA sing 64 n n CBC HBC1 CLA sing 65 n n CBC HBC2 CLA sing 66 n n CBC HBC3 CLA sing 67 n n ND C1D CLA sing 68 n n ND C4D CLA sing 69 n n C1D C2D CLA sing 70 n n C2D C3D CLA doub 71 n n C2D CMD CLA sing 72 n n C3D C4D CLA sing 73 n n C3D CAD CLA sing 74 n n CMD HMD1 CLA sing 75 n n CMD HMD2 CLA sing 76 n n CMD HMD3 CLA sing 77 n n CAD OBD CLA doub 78 n n CAD CBD CLA sing 79 n n CBD CGD CLA sing 80 n n CBD HBD CLA sing 81 n n CGD O1D CLA doub 82 n n CGD O2D CLA sing 83 n n O2D CED CLA sing 84 n n CED HED1 CLA sing 85 n n CED HED2 CLA sing 86 n n CED HED3 CLA sing 87 n n C1 C2 CLA sing 88 n n C1 H11 CLA sing 89 n n C1 H12 CLA sing 90 n n C2 C3 CLA doub 91 e n C2 H2 CLA sing 92 n n C3 C4 CLA sing 93 n n C3 C5 CLA sing 94 n n C4 H41 CLA sing 95 n n C4 H42 CLA sing 96 n n C4 H43 CLA sing 97 n n C5 C6 CLA sing 98 n n C5 H51 CLA sing 99 n n C5 H52 CLA sing 100 n n C6 C7 CLA sing 101 n n C6 H61 CLA sing 102 n n C6 H62 CLA sing 103 n n C7 C8 CLA sing 104 n n C7 H71 CLA sing 105 n n C7 H72 CLA sing 106 n n C8 C9 CLA sing 107 n n C8 C10 CLA sing 108 n n C8 H8 CLA sing 109 n n C9 H91 CLA sing 110 n n C9 H92 CLA sing 111 n n C9 H93 CLA sing 112 n n C10 C11 CLA sing 113 n n C10 H101 CLA sing 114 n n C10 H102 CLA sing 115 n n C11 C12 CLA sing 116 n n C11 H111 CLA sing 117 n n C11 H112 CLA sing 118 n n C12 C13 CLA sing 119 n n C12 H121 CLA sing 120 n n C12 H122 CLA sing 121 n n C13 C14 CLA sing 122 n n C13 C15 CLA sing 123 n n C13 H13 CLA sing 124 n n C14 H141 CLA sing 125 n n C14 H142 CLA sing 126 n n C14 H143 CLA sing 127 n n C15 C16 CLA sing 128 n n C15 H151 CLA sing 129 n n C15 H152 CLA sing 130 n n C16 C17 CLA sing 131 n n C16 H161 CLA sing 132 n n C16 H162 CLA sing 133 n n C17 C18 CLA sing 134 n n C17 H171 CLA sing 135 n n C17 H172 CLA sing 136 n n C18 C19 CLA sing 137 n n C18 C20 CLA sing 138 n n C18 H18 CLA sing 139 n n C19 H191 CLA sing 140 n n C19 H192 CLA sing 141 n n C19 H193 CLA sing 142 n n C20 H201 CLA sing 143 n n C20 H202 CLA sing 144 n n C20 H203 CLA sing 145 n n # _atom_sites.entry_id 1C51 _atom_sites.fract_transf_matrix[1][1] 0.003497 _atom_sites.fract_transf_matrix[1][2] 0.002019 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004037 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005988 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 9 CLA A 1 598 2 CLA CLA . J 9 CLA A 1 599 5 CLA CLA . K 9 CLA A 1 600 6 CLA CLA . L 10 PQN A 1 601 7 PQN PQN . M 11 SF4 A 1 602 9 SF4 FS4 . N 9 CLA A 1 603 103 CLA CLA . O 9 CLA A 1 604 107 CLA CLA . P 9 CLA A 1 605 109 CLA CLA . Q 9 CLA A 1 606 110 CLA CLA . R 9 CLA A 1 607 114 CLA CLA . S 9 CLA A 1 608 118 CLA CLA . T 9 CLA A 1 609 120 CLA CLA . U 9 CLA A 1 610 121 CLA CLA . V 9 CLA A 1 611 122 CLA CLA . W 9 CLA A 1 612 124 CLA CLA . X 9 CLA A 1 613 131 CLA CLA . Y 9 CLA A 1 614 133 CLA CLA . Z 9 CLA A 1 615 134 CLA CLA . AA 9 CLA A 1 616 137 CLA CLA . BA 9 CLA A 1 617 140 CLA CLA . CA 9 CLA A 1 618 141 CLA CLA . DA 9 CLA A 1 619 144 CLA CLA . EA 9 CLA A 1 620 145 CLA CLA . FA 9 CLA A 1 621 148 CLA CLA . GA 9 CLA A 1 622 150 CLA CLA . HA 9 CLA A 1 623 153 CLA CLA . IA 9 CLA A 1 624 155 CLA CLA . JA 9 CLA A 1 625 156 CLA CLA . KA 9 CLA A 1 626 158 CLA CLA . LA 9 CLA A 1 627 162 CLA CLA . MA 9 CLA A 1 628 165 CLA CLA . NA 9 CLA A 1 629 166 CLA CLA . OA 9 CLA B 1 620 1 CLA CLA . PA 9 CLA B 1 621 3 CLA CLA . QA 9 CLA B 1 622 4 CLA CLA . RA 10 PQN B 1 623 8 PQN PQN . SA 9 CLA B 1 624 101 CLA CLA . TA 9 CLA B 1 625 102 CLA CLA . UA 9 CLA B 1 626 104 CLA CLA . VA 9 CLA B 1 627 105 CLA CLA . WA 9 CLA B 1 628 106 CLA CLA . XA 9 CLA B 1 629 108 CLA CLA . YA 9 CLA B 1 630 111 CLA CLA . ZA 9 CLA B 1 631 112 CLA CLA . AB 9 CLA B 1 632 113 CLA CLA . BB 9 CLA B 1 633 115 CLA CLA . CB 9 CLA B 1 634 116 CLA CLA . DB 9 CLA B 1 635 119 CLA CLA . EB 9 CLA B 1 636 123 CLA CLA . FB 9 CLA B 1 637 125 CLA CLA . GB 9 CLA B 1 638 126 CLA CLA . HB 9 CLA B 1 639 127 CLA CLA . IB 9 CLA B 1 640 129 CLA CLA . JB 9 CLA B 1 641 130 CLA CLA . KB 9 CLA B 1 642 132 CLA CLA . LB 9 CLA B 1 643 136 CLA CLA . MB 9 CLA B 1 644 139 CLA CLA . NB 9 CLA B 1 645 142 CLA CLA . OB 9 CLA B 1 646 146 CLA CLA . PB 9 CLA B 1 647 151 CLA CLA . QB 9 CLA B 1 648 152 CLA CLA . RB 9 CLA B 1 649 154 CLA CLA . SB 9 CLA B 1 650 159 CLA CLA . TB 9 CLA B 1 651 160 CLA CLA . UB 9 CLA B 1 652 161 CLA CLA . VB 9 CLA B 1 653 164 CLA CLA . WB 11 SF4 C 1 78 10 SF4 FS4 . XB 11 SF4 C 1 79 11 SF4 FS4 . YB 9 CLA F 1 154 117 CLA CLA . ZB 9 CLA F 1 155 128 CLA CLA . AC 9 CLA F 1 156 138 CLA CLA . BC 9 CLA F 1 157 143 CLA CLA . CC 9 CLA F 1 158 157 CLA CLA . DC 9 CLA K 1 135 135 CLA CLA . EC 9 CLA L 1 147 147 CLA CLA . FC 9 CLA L 1 149 149 CLA CLA . GC 9 CLA L 1 163 163 CLA CLA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 MG MG CLA . . . RB 9 66.467 91.777 69.216 1 20 ? MG CLA 649 B 1 HETATM 2 C CHA CLA . . . RB 9 66.875 89.252 71.452 1 20 ? CHA CLA 649 B 1 HETATM 3 C CHB CLA . . . RB 9 68.769 93.633 70.875 1 20 ? CHB CLA 649 B 1 HETATM 4 C CHC CLA . . . RB 9 66.066 94.289 66.972 1 20 ? CHC CLA 649 B 1 HETATM 5 C CHD CLA . . . RB 9 64.178 89.928 67.542 1 20 ? CHD CLA 649 B 1 HETATM 6 N NA CLA . . . RB 9 67.574 91.504 70.811 1 20 ? NA CLA 649 B 1 HETATM 7 C C1A CLA . . . RB 9 67.626 90.391 71.636 1 20 ? C1A CLA 649 B 1 HETATM 8 C C2A CLA . . . RB 9 68.564 90.569 72.712 1 20 ? C2A CLA 649 B 1 HETATM 9 C C3A CLA . . . RB 9 69.098 91.81 72.545 1 20 ? C3A CLA 649 B 1 HETATM 10 C C4A CLA . . . RB 9 68.483 92.377 71.371 1 20 ? C4A CLA 649 B 1 HETATM 11 N NB CLA . . . RB 9 67.243 93.566 68.975 1 20 ? NB CLA 649 B 1 HETATM 12 C C1B CLA . . . RB 9 68.191 94.193 69.755 1 20 ? C1B CLA 649 B 1 HETATM 13 C C2B CLA . . . RB 9 68.503 95.51 69.254 1 20 ? C2B CLA 649 B 1 HETATM 14 C C3B CLA . . . RB 9 67.737 95.697 68.149 1 20 ? C3B CLA 649 B 1 HETATM 15 C C4B CLA . . . RB 9 66.966 94.493 67.987 1 20 ? C4B CLA 649 B 1 HETATM 16 N NC CLA . . . RB 9 65.369 92.04 67.617 1 20 ? NC CLA 649 B 1 HETATM 17 C C1C CLA . . . RB 9 65.319 93.149 66.794 1 20 ? C1C CLA 649 B 1 HETATM 18 C C2C CLA . . . RB 9 64.387 92.966 65.722 1 20 ? C2C CLA 649 B 1 HETATM 19 C C3C CLA . . . RB 9 63.855 91.726 65.89 1 20 ? C3C CLA 649 B 1 HETATM 20 C C4C CLA . . . RB 9 64.465 91.168 67.058 1 20 ? C4C CLA 649 B 1 HETATM 21 N ND CLA . . . RB 9 65.693 89.99 69.44 1 20 ? ND CLA 649 B 1 HETATM 22 C C1D CLA . . . RB 9 64.746 89.369 68.653 1 20 ? C1D CLA 649 B 1 HETATM 23 C C2D CLA . . . RB 9 64.426 88.05 69.143 1 20 ? C2D CLA 649 B 1 HETATM 24 C C3D CLA . . . RB 9 65.191 87.856 70.255 1 20 ? C3D CLA 649 B 1 HETATM 25 C C4D CLA . . . RB 9 65.971 89.06 70.428 1 20 ? C4D CLA 649 B 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 20 _model_server_stats.element_count 25 #