data_1C51 # _model_server_result.job_id wJgtzZnzbCbAVFYwHQ0-VA _model_server_result.datetime_utc '2024-12-26 17:46:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1c51 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"XB","auth_seq_id":79}' # _entry.id 1C51 # _exptl.entry_id 1C51 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 351.64 _entity.id 11 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IRON/SULFUR CLUSTER' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1C51 _cell.length_a 286 _cell.length_b 286 _cell.length_c 167 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1C51 _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 24-meric _pdbx_struct_assembly.oligomeric_count 24 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB,ZB,AC,BC,CC,DC,EC,FC,GC _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 286 0 0 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 143 247.683265 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 11 M N N ? 11 WB N N ? 11 XB N N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id CA _struct_conn.ptnr1_label_comp_id UNK _struct_conn.ptnr1_label_seq_id 454 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id UNK _struct_conn.ptnr1_auth_seq_id 454 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id M _struct_conn.ptnr2_label_atom_id FE2 _struct_conn.ptnr2_label_comp_id SF4 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id SF4 _struct_conn.ptnr2_auth_seq_id 602 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.128 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'Fe4 S4' _chem_comp.formula_weight 351.64 _chem_comp.id SF4 _chem_comp.mon_nstd_flag . _chem_comp.name 'IRON/SULFUR CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S2 SF4 sing 226 n n FE1 S3 SF4 sing 227 n n FE1 S4 SF4 sing 228 n n FE2 S1 SF4 sing 229 n n FE2 S3 SF4 sing 230 n n FE2 S4 SF4 sing 231 n n FE3 S1 SF4 sing 232 n n FE3 S2 SF4 sing 233 n n FE3 S4 SF4 sing 234 n n FE4 S1 SF4 sing 235 n n FE4 S2 SF4 sing 236 n n FE4 S3 SF4 sing 237 n n # _atom_sites.entry_id 1C51 _atom_sites.fract_transf_matrix[1][1] 0.003497 _atom_sites.fract_transf_matrix[1][2] 0.002019 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004037 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005988 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 9 CLA A 1 598 2 CLA CLA . J 9 CLA A 1 599 5 CLA CLA . K 9 CLA A 1 600 6 CLA CLA . L 10 PQN A 1 601 7 PQN PQN . M 11 SF4 A 1 602 9 SF4 FS4 . N 9 CLA A 1 603 103 CLA CLA . O 9 CLA A 1 604 107 CLA CLA . P 9 CLA A 1 605 109 CLA CLA . Q 9 CLA A 1 606 110 CLA CLA . R 9 CLA A 1 607 114 CLA CLA . S 9 CLA A 1 608 118 CLA CLA . T 9 CLA A 1 609 120 CLA CLA . U 9 CLA A 1 610 121 CLA CLA . V 9 CLA A 1 611 122 CLA CLA . W 9 CLA A 1 612 124 CLA CLA . X 9 CLA A 1 613 131 CLA CLA . Y 9 CLA A 1 614 133 CLA CLA . Z 9 CLA A 1 615 134 CLA CLA . AA 9 CLA A 1 616 137 CLA CLA . BA 9 CLA A 1 617 140 CLA CLA . CA 9 CLA A 1 618 141 CLA CLA . DA 9 CLA A 1 619 144 CLA CLA . EA 9 CLA A 1 620 145 CLA CLA . FA 9 CLA A 1 621 148 CLA CLA . GA 9 CLA A 1 622 150 CLA CLA . HA 9 CLA A 1 623 153 CLA CLA . IA 9 CLA A 1 624 155 CLA CLA . JA 9 CLA A 1 625 156 CLA CLA . KA 9 CLA A 1 626 158 CLA CLA . LA 9 CLA A 1 627 162 CLA CLA . MA 9 CLA A 1 628 165 CLA CLA . NA 9 CLA A 1 629 166 CLA CLA . OA 9 CLA B 1 620 1 CLA CLA . PA 9 CLA B 1 621 3 CLA CLA . QA 9 CLA B 1 622 4 CLA CLA . RA 10 PQN B 1 623 8 PQN PQN . SA 9 CLA B 1 624 101 CLA CLA . TA 9 CLA B 1 625 102 CLA CLA . UA 9 CLA B 1 626 104 CLA CLA . VA 9 CLA B 1 627 105 CLA CLA . WA 9 CLA B 1 628 106 CLA CLA . XA 9 CLA B 1 629 108 CLA CLA . YA 9 CLA B 1 630 111 CLA CLA . ZA 9 CLA B 1 631 112 CLA CLA . AB 9 CLA B 1 632 113 CLA CLA . BB 9 CLA B 1 633 115 CLA CLA . CB 9 CLA B 1 634 116 CLA CLA . DB 9 CLA B 1 635 119 CLA CLA . EB 9 CLA B 1 636 123 CLA CLA . FB 9 CLA B 1 637 125 CLA CLA . GB 9 CLA B 1 638 126 CLA CLA . HB 9 CLA B 1 639 127 CLA CLA . IB 9 CLA B 1 640 129 CLA CLA . JB 9 CLA B 1 641 130 CLA CLA . KB 9 CLA B 1 642 132 CLA CLA . LB 9 CLA B 1 643 136 CLA CLA . MB 9 CLA B 1 644 139 CLA CLA . NB 9 CLA B 1 645 142 CLA CLA . OB 9 CLA B 1 646 146 CLA CLA . PB 9 CLA B 1 647 151 CLA CLA . QB 9 CLA B 1 648 152 CLA CLA . RB 9 CLA B 1 649 154 CLA CLA . SB 9 CLA B 1 650 159 CLA CLA . TB 9 CLA B 1 651 160 CLA CLA . UB 9 CLA B 1 652 161 CLA CLA . VB 9 CLA B 1 653 164 CLA CLA . WB 11 SF4 C 1 78 10 SF4 FS4 . XB 11 SF4 C 1 79 11 SF4 FS4 . YB 9 CLA F 1 154 117 CLA CLA . ZB 9 CLA F 1 155 128 CLA CLA . AC 9 CLA F 1 156 138 CLA CLA . BC 9 CLA F 1 157 143 CLA CLA . CC 9 CLA F 1 158 157 CLA CLA . DC 9 CLA K 1 135 135 CLA CLA . EC 9 CLA L 1 147 147 CLA CLA . FC 9 CLA L 1 149 149 CLA CLA . GC 9 CLA L 1 163 163 CLA CLA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 SF4 . . . XB 11 97.436 121.776 34.655 1 20 ? FE1 SF4 79 C 1 HETATM 2 FE FE2 SF4 . . . XB 11 97.175 122.898 37.006 1 20 ? FE2 SF4 79 C 1 HETATM 3 FE FE3 SF4 . . . XB 11 98.291 124.17 35.031 1 20 ? FE3 SF4 79 C 1 HETATM 4 FE FE4 SF4 . . . XB 11 99.557 121.924 36.077 1 20 ? FE4 SF4 79 C 1 HETATM 5 S S1 SF4 . . . XB 11 99.072 123.937 37.047 1 20 ? S1 SF4 79 C 1 HETATM 6 S S2 SF4 . . . XB 11 99.363 122.54 33.973 1 20 ? S2 SF4 79 C 1 HETATM 7 S S3 SF4 . . . XB 11 97.745 120.792 36.561 1 20 ? S3 SF4 79 C 1 HETATM 8 S S4 SF4 . . . XB 11 96.229 123.512 35.17 1 20 ? S4 SF4 79 C 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 335 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #