data_1C5N # _model_server_result.job_id Tz_t7btfrQrc_If7fIjg-Q _model_server_result.datetime_utc '2024-10-24 04:33:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1c5n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":521}' # _entry.id 1C5N # _exptl.entry_id 1C5N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.23 _cell.angle_gamma 90 _cell.entry_id 1C5N _cell.length_a 72.14 _cell.length_b 72.26 _cell.length_c 73.09 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1C5N _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 9 L CYS 1 1_555 B SG CYS 119 H CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? disulf ? disulf2 B SG CYS 28 H CYS 42 1_555 B SG CYS 44 H CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf3 B SG CYS 173 H CYS 168 1_555 B SG CYS 187 H CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? disulf ? disulf4 B SG CYS 201 H CYS 191 1_555 B SG CYS 231 H CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? covale ? covale1 C C GLU 8 I GLU 62 1_555 C N TYS 9 I TYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.305 ? covale ? covale2 C C TYS 9 I TYS 63 1_555 C N LEU 10 I LEU 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.3 ? metalc ? metalc1 B O LYS 174 H LYS 169 1_555 E CA CA . H CA 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc2 B O THR 177 H THR 172 1_555 E CA CA . H CA 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc3 B O PHE 215 H PHE 204 4_546 E CA CA . H CA 521 1_555 A ? ? ? ? ? ? ? ? ? ? ? 2.449 ? metalc ? metalc4 B O ARG 233 H ARG 221 1_555 D NA NA . H NA 409 1_555 A ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc5 B O LYS 236 H LYS 224 1_555 D NA NA . H NA 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc6 D NA NA . H NA 409 1_555 H O HOH . H HOH 541 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.559 ? metalc ? metalc7 D NA NA . H NA 409 1_555 H O HOH . H HOH 544 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.639 ? metalc ? metalc8 D NA NA . H NA 409 1_555 H O HOH . H HOH 568 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? metalc ? metalc9 D NA NA . H NA 409 1_555 H O HOH . H HOH 570 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? metalc ? metalc10 E CA CA . H CA 521 1_555 H O HOH . H HOH 620 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc11 E CA CA . H CA 521 1_555 H O HOH . H HOH 621 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc12 E CA CA . H CA 521 1_555 H O HOH . H HOH 717 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1C5N _atom_sites.fract_transf_matrix[1][1] 0.013862 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002752 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013839 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013949 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NA H 1 409 409 NA NA . E 5 CA H 1 521 521 CA CA . F 6 ESI H 1 522 246 ESI ESI . G 7 HOH L 1 391 391 HOH HOH . G 7 HOH L 2 440 440 HOH HOH . G 7 HOH L 3 449 449 HOH HOH . G 7 HOH L 4 452 452 HOH HOH . G 7 HOH L 5 465 465 HOH HOH . G 7 HOH L 6 468 468 HOH HOH . G 7 HOH L 7 470 470 HOH HOH . G 7 HOH L 8 474 474 HOH HOH . G 7 HOH L 9 485 485 HOH HOH . G 7 HOH L 10 511 511 HOH HOH . G 7 HOH L 11 517 517 HOH HOH . G 7 HOH L 12 534 534 HOH HOH . G 7 HOH L 13 540 540 HOH HOH . G 7 HOH L 14 560 560 HOH HOH . G 7 HOH L 15 575 575 HOH HOH . G 7 HOH L 16 576 576 HOH HOH . G 7 HOH L 17 599 599 HOH HOH . G 7 HOH L 18 652 652 HOH HOH . G 7 HOH L 19 653 653 HOH HOH . G 7 HOH L 20 663 663 HOH HOH . G 7 HOH L 21 674 674 HOH HOH . G 7 HOH L 22 733 733 HOH HOH . G 7 HOH L 23 758 758 HOH HOH . G 7 HOH L 24 759 759 HOH HOH . G 7 HOH L 25 760 760 HOH HOH . G 7 HOH L 26 761 761 HOH HOH . G 7 HOH L 27 762 762 HOH HOH . H 7 HOH H 1 523 389 HOH HOH . H 7 HOH H 2 524 390 HOH HOH . H 7 HOH H 3 525 395 HOH HOH . H 7 HOH H 4 526 396 HOH HOH . H 7 HOH H 5 527 401 HOH HOH . H 7 HOH H 6 528 402 HOH HOH . H 7 HOH H 7 529 403 HOH HOH . H 7 HOH H 8 530 404 HOH HOH . H 7 HOH H 9 531 405 HOH HOH . H 7 HOH H 10 532 406 HOH HOH . H 7 HOH H 11 533 407 HOH HOH . H 7 HOH H 12 534 408 HOH HOH . H 7 HOH H 13 535 410 HOH HOH . H 7 HOH H 14 536 411 HOH HOH . H 7 HOH H 15 537 412 HOH HOH . H 7 HOH H 16 538 413 HOH HOH . H 7 HOH H 17 539 414 HOH HOH . H 7 HOH H 18 540 415 HOH HOH . H 7 HOH H 19 541 416 HOH HOH . H 7 HOH H 20 542 417 HOH HOH . H 7 HOH H 21 543 418 HOH HOH . H 7 HOH H 22 544 419 HOH HOH . H 7 HOH H 23 545 420 HOH HOH . H 7 HOH H 24 546 421 HOH HOH . H 7 HOH H 25 547 422 HOH HOH . H 7 HOH H 26 548 423 HOH HOH . H 7 HOH H 27 549 424 HOH HOH . H 7 HOH H 28 550 425 HOH HOH . H 7 HOH H 29 551 426 HOH HOH . H 7 HOH H 30 552 427 HOH HOH . H 7 HOH H 31 553 428 HOH HOH . H 7 HOH H 32 554 430 HOH HOH . H 7 HOH H 33 555 431 HOH HOH . H 7 HOH H 34 556 432 HOH HOH . H 7 HOH H 35 557 433 HOH HOH . H 7 HOH H 36 558 434 HOH HOH . H 7 HOH H 37 559 435 HOH HOH . H 7 HOH H 38 560 436 HOH HOH . H 7 HOH H 39 561 437 HOH HOH . H 7 HOH H 40 562 438 HOH HOH . H 7 HOH H 41 563 439 HOH HOH . H 7 HOH H 42 564 441 HOH HOH . H 7 HOH H 43 565 442 HOH HOH . H 7 HOH H 44 566 443 HOH HOH . H 7 HOH H 45 567 444 HOH HOH . H 7 HOH H 46 568 445 HOH HOH . H 7 HOH H 47 569 446 HOH HOH . H 7 HOH H 48 570 447 HOH HOH . H 7 HOH H 49 571 450 HOH HOH . H 7 HOH H 50 572 451 HOH HOH . H 7 HOH H 51 573 454 HOH HOH . H 7 HOH H 52 574 455 HOH HOH . H 7 HOH H 53 575 456 HOH HOH . H 7 HOH H 54 576 457 HOH HOH . H 7 HOH H 55 577 458 HOH HOH . H 7 HOH H 56 578 460 HOH HOH . H 7 HOH H 57 579 461 HOH HOH . H 7 HOH H 58 580 463 HOH HOH . H 7 HOH H 59 581 466 HOH HOH . H 7 HOH H 60 582 467 HOH HOH . H 7 HOH H 61 583 469 HOH HOH . H 7 HOH H 62 584 471 HOH HOH . H 7 HOH H 63 585 472 HOH HOH . H 7 HOH H 64 586 473 HOH HOH . H 7 HOH H 65 587 476 HOH HOH . H 7 HOH H 66 588 477 HOH HOH . H 7 HOH H 67 589 479 HOH HOH . H 7 HOH H 68 590 480 HOH HOH . H 7 HOH H 69 591 481 HOH HOH . H 7 HOH H 70 592 482 HOH HOH . H 7 HOH H 71 593 483 HOH HOH . H 7 HOH H 72 594 484 HOH HOH . H 7 HOH H 73 595 486 HOH HOH . H 7 HOH H 74 596 487 HOH HOH . H 7 HOH H 75 597 488 HOH HOH . H 7 HOH H 76 598 489 HOH HOH . H 7 HOH H 77 599 490 HOH HOH . H 7 HOH H 78 600 491 HOH HOH . H 7 HOH H 79 601 492 HOH HOH . H 7 HOH H 80 602 493 HOH HOH . H 7 HOH H 81 603 494 HOH HOH . H 7 HOH H 82 604 495 HOH HOH . H 7 HOH H 83 605 496 HOH HOH . H 7 HOH H 84 606 498 HOH HOH . H 7 HOH H 85 607 500 HOH HOH . H 7 HOH H 86 608 501 HOH HOH . H 7 HOH H 87 609 503 HOH HOH . H 7 HOH H 88 610 504 HOH HOH . H 7 HOH H 89 611 505 HOH HOH . H 7 HOH H 90 612 507 HOH HOH . H 7 HOH H 91 613 509 HOH HOH . H 7 HOH H 92 614 510 HOH HOH . H 7 HOH H 93 615 512 HOH HOH . H 7 HOH H 94 616 513 HOH HOH . H 7 HOH H 95 617 514 HOH HOH . H 7 HOH H 96 618 515 HOH HOH . H 7 HOH H 97 619 516 HOH HOH . H 7 HOH H 98 620 519 HOH HOH . H 7 HOH H 99 621 522 HOH HOH . H 7 HOH H 100 622 523 HOH HOH . H 7 HOH H 101 623 524 HOH HOH . H 7 HOH H 102 624 525 HOH HOH . H 7 HOH H 103 625 526 HOH HOH . H 7 HOH H 104 626 527 HOH HOH . H 7 HOH H 105 627 528 HOH HOH . H 7 HOH H 106 628 530 HOH HOH . H 7 HOH H 107 629 532 HOH HOH . H 7 HOH H 108 630 533 HOH HOH . H 7 HOH H 109 631 536 HOH HOH . H 7 HOH H 110 632 537 HOH HOH . H 7 HOH H 111 633 539 HOH HOH . H 7 HOH H 112 634 541 HOH HOH . H 7 HOH H 113 635 542 HOH HOH . H 7 HOH H 114 636 544 HOH HOH . H 7 HOH H 115 637 546 HOH HOH . H 7 HOH H 116 638 547 HOH HOH . H 7 HOH H 117 639 549 HOH HOH . H 7 HOH H 118 640 550 HOH HOH . H 7 HOH H 119 641 551 HOH HOH . H 7 HOH H 120 642 552 HOH HOH . H 7 HOH H 121 643 553 HOH HOH . H 7 HOH H 122 644 554 HOH HOH . H 7 HOH H 123 645 555 HOH HOH . H 7 HOH H 124 646 557 HOH HOH . H 7 HOH H 125 647 558 HOH HOH . H 7 HOH H 126 648 559 HOH HOH . H 7 HOH H 127 649 562 HOH HOH . H 7 HOH H 128 650 563 HOH HOH . H 7 HOH H 129 651 565 HOH HOH . H 7 HOH H 130 652 566 HOH HOH . H 7 HOH H 131 653 567 HOH HOH . H 7 HOH H 132 654 568 HOH HOH . H 7 HOH H 133 655 569 HOH HOH . H 7 HOH H 134 656 570 HOH HOH . H 7 HOH H 135 657 571 HOH HOH . H 7 HOH H 136 658 572 HOH HOH . H 7 HOH H 137 659 573 HOH HOH . H 7 HOH H 138 660 577 HOH HOH . H 7 HOH H 139 661 580 HOH HOH . H 7 HOH H 140 662 582 HOH HOH . H 7 HOH H 141 663 583 HOH HOH . H 7 HOH H 142 664 584 HOH HOH . H 7 HOH H 143 665 586 HOH HOH . H 7 HOH H 144 666 587 HOH HOH . H 7 HOH H 145 667 601 HOH HOH . H 7 HOH H 146 668 614 HOH HOH . H 7 HOH H 147 669 615 HOH HOH . H 7 HOH H 148 670 619 HOH HOH . H 7 HOH H 149 671 624 HOH HOH . H 7 HOH H 150 672 643 HOH HOH . H 7 HOH H 151 673 661 HOH HOH . H 7 HOH H 152 674 662 HOH HOH . H 7 HOH H 153 675 666 HOH HOH . H 7 HOH H 154 676 670 HOH HOH . H 7 HOH H 155 677 673 HOH HOH . H 7 HOH H 156 678 675 HOH HOH . H 7 HOH H 157 679 680 HOH HOH . H 7 HOH H 158 680 687 HOH HOH . H 7 HOH H 159 681 691 HOH HOH . H 7 HOH H 160 682 692 HOH HOH . H 7 HOH H 161 683 693 HOH HOH . H 7 HOH H 162 684 694 HOH HOH . H 7 HOH H 163 685 697 HOH HOH . H 7 HOH H 164 686 704 HOH HOH . H 7 HOH H 165 687 705 HOH HOH . H 7 HOH H 166 688 710 HOH HOH . H 7 HOH H 167 689 711 HOH HOH . H 7 HOH H 168 690 717 HOH HOH . H 7 HOH H 169 691 718 HOH HOH . H 7 HOH H 170 692 719 HOH HOH . H 7 HOH H 171 693 720 HOH HOH . H 7 HOH H 172 694 721 HOH HOH . H 7 HOH H 173 695 722 HOH HOH . H 7 HOH H 174 696 723 HOH HOH . H 7 HOH H 175 697 724 HOH HOH . H 7 HOH H 176 698 725 HOH HOH . H 7 HOH H 177 699 726 HOH HOH . H 7 HOH H 178 700 728 HOH HOH . H 7 HOH H 179 701 729 HOH HOH . H 7 HOH H 180 702 730 HOH HOH . H 7 HOH H 181 703 732 HOH HOH . H 7 HOH H 182 704 734 HOH HOH . H 7 HOH H 183 705 735 HOH HOH . H 7 HOH H 184 706 736 HOH HOH . H 7 HOH H 185 707 737 HOH HOH . H 7 HOH H 186 708 738 HOH HOH . H 7 HOH H 187 709 739 HOH HOH . H 7 HOH H 188 710 740 HOH HOH . H 7 HOH H 189 711 741 HOH HOH . H 7 HOH H 190 712 742 HOH HOH . H 7 HOH H 191 713 743 HOH HOH . H 7 HOH H 192 714 744 HOH HOH . H 7 HOH H 193 715 745 HOH HOH . H 7 HOH H 194 716 746 HOH HOH . H 7 HOH H 195 717 747 HOH HOH . H 7 HOH H 196 718 748 HOH HOH . H 7 HOH H 197 719 749 HOH HOH . H 7 HOH H 198 720 750 HOH HOH . H 7 HOH H 199 721 751 HOH HOH . H 7 HOH H 200 722 752 HOH HOH . H 7 HOH H 201 723 753 HOH HOH . H 7 HOH H 202 724 754 HOH HOH . H 7 HOH H 203 725 755 HOH HOH . H 7 HOH H 204 726 756 HOH HOH . H 7 HOH H 205 727 757 HOH HOH . H 7 HOH H 206 728 763 HOH HOH . H 7 HOH H 207 729 764 HOH HOH . H 7 HOH H 208 730 765 HOH HOH . H 7 HOH H 209 731 766 HOH HOH . H 7 HOH H 210 732 767 HOH HOH . H 7 HOH H 211 733 768 HOH HOH . H 7 HOH H 212 734 769 HOH HOH . H 7 HOH H 213 735 770 HOH HOH . H 7 HOH H 214 736 771 HOH HOH . H 7 HOH H 215 737 772 HOH HOH . H 7 HOH H 216 738 773 HOH HOH . H 7 HOH H 217 739 774 HOH HOH . H 7 HOH H 218 740 775 HOH HOH . H 7 HOH H 219 741 776 HOH HOH . H 7 HOH H 220 742 777 HOH HOH . H 7 HOH H 221 743 778 HOH HOH . H 7 HOH H 222 744 779 HOH HOH . H 7 HOH H 223 745 780 HOH HOH . H 7 HOH H 224 746 781 HOH HOH . I 7 HOH I 1 499 499 HOH HOH . I 7 HOH I 2 520 520 HOH HOH . I 7 HOH I 3 535 535 HOH HOH . I 7 HOH I 4 597 597 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 5 _atom_site.Cartn_x 18.674 _atom_site.Cartn_y -16.434 _atom_site.Cartn_z 38.353 _atom_site.occupancy 0.36 _atom_site.B_iso_or_equiv 7.57 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 521 _atom_site.auth_asym_id H _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #