data_1C69 # _model_server_result.job_id eDVlbWDiEi-mDMO-pEC-ng _model_server_result.datetime_utc '2024-10-13 16:24:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1c69 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":901}' # _entry.id 1C69 # _exptl.entry_id 1C69 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-MERCAPTOETHANOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1C69 _cell.length_a 61.053 _cell.length_b 61.053 _cell.length_c 97.264 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1C69 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id BME _chem_comp.mon_nstd_flag . _chem_comp.name BETA-MERCAPTOETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BME sing 70 n n C1 O1 BME sing 71 n n C1 H11 BME sing 72 n n C1 H12 BME sing 73 n n C2 S2 BME sing 74 n n C2 H21 BME sing 75 n n C2 H22 BME sing 76 n n O1 HO1 BME sing 77 n n S2 HS2 BME sing 78 n n # _atom_sites.entry_id 1C69 _atom_sites.fract_transf_matrix[1][1] 0.016379 _atom_sites.fract_transf_matrix[1][2] 0.009457 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018913 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010281 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 173 173 CL CL . C 2 CL A 1 178 178 CL CL . D 3 BME A 1 901 901 BME BME . E 3 BME A 1 902 902 BME BME . F 4 HOH A 1 171 171 HOH HOH . F 4 HOH A 2 172 172 HOH HOH . F 4 HOH A 3 174 174 HOH HOH . F 4 HOH A 4 175 175 HOH HOH . F 4 HOH A 5 176 176 HOH HOH . F 4 HOH A 6 177 177 HOH HOH . F 4 HOH A 7 179 179 HOH HOH . F 4 HOH A 8 180 180 HOH HOH . F 4 HOH A 9 181 181 HOH HOH . F 4 HOH A 10 182 182 HOH HOH . F 4 HOH A 11 183 183 HOH HOH . F 4 HOH A 12 184 184 HOH HOH . F 4 HOH A 13 185 185 HOH HOH . F 4 HOH A 14 186 186 HOH HOH . F 4 HOH A 15 187 187 HOH HOH . F 4 HOH A 16 188 188 HOH HOH . F 4 HOH A 17 190 190 HOH HOH . F 4 HOH A 18 191 191 HOH HOH . F 4 HOH A 19 192 192 HOH HOH . F 4 HOH A 20 193 193 HOH HOH . F 4 HOH A 21 194 194 HOH HOH . F 4 HOH A 22 195 195 HOH HOH . F 4 HOH A 23 196 196 HOH HOH . F 4 HOH A 24 197 197 HOH HOH . F 4 HOH A 25 198 198 HOH HOH . F 4 HOH A 26 199 199 HOH HOH . F 4 HOH A 27 200 200 HOH HOH . F 4 HOH A 28 201 201 HOH HOH . F 4 HOH A 29 202 202 HOH HOH . F 4 HOH A 30 203 203 HOH HOH . F 4 HOH A 31 204 204 HOH HOH . F 4 HOH A 32 206 206 HOH HOH . F 4 HOH A 33 207 207 HOH HOH . F 4 HOH A 34 208 208 HOH HOH . F 4 HOH A 35 209 209 HOH HOH . F 4 HOH A 36 210 210 HOH HOH . F 4 HOH A 37 211 211 HOH HOH . F 4 HOH A 38 212 212 HOH HOH . F 4 HOH A 39 213 213 HOH HOH . F 4 HOH A 40 214 214 HOH HOH . F 4 HOH A 41 215 215 HOH HOH . F 4 HOH A 42 216 216 HOH HOH . F 4 HOH A 43 217 217 HOH HOH . F 4 HOH A 44 218 218 HOH HOH . F 4 HOH A 45 219 219 HOH HOH . F 4 HOH A 46 220 220 HOH HOH . F 4 HOH A 47 221 221 HOH HOH . F 4 HOH A 48 222 222 HOH HOH . F 4 HOH A 49 223 223 HOH HOH . F 4 HOH A 50 224 224 HOH HOH . F 4 HOH A 51 225 225 HOH HOH . F 4 HOH A 52 227 227 HOH HOH . F 4 HOH A 53 228 228 HOH HOH . F 4 HOH A 54 229 229 HOH HOH . F 4 HOH A 55 230 230 HOH HOH . F 4 HOH A 56 231 231 HOH HOH . F 4 HOH A 57 232 232 HOH HOH . F 4 HOH A 58 233 233 HOH HOH . F 4 HOH A 59 234 234 HOH HOH . F 4 HOH A 60 235 235 HOH HOH . F 4 HOH A 61 236 236 HOH HOH . F 4 HOH A 62 237 237 HOH HOH . F 4 HOH A 63 238 238 HOH HOH . F 4 HOH A 64 239 239 HOH HOH . F 4 HOH A 65 240 240 HOH HOH . F 4 HOH A 66 242 242 HOH HOH . F 4 HOH A 67 243 243 HOH HOH . F 4 HOH A 68 244 244 HOH HOH . F 4 HOH A 69 245 245 HOH HOH . F 4 HOH A 70 246 246 HOH HOH . F 4 HOH A 71 247 247 HOH HOH . F 4 HOH A 72 248 248 HOH HOH . F 4 HOH A 73 249 249 HOH HOH . F 4 HOH A 74 250 250 HOH HOH . F 4 HOH A 75 251 251 HOH HOH . F 4 HOH A 76 252 252 HOH HOH . F 4 HOH A 77 253 253 HOH HOH . F 4 HOH A 78 254 254 HOH HOH . F 4 HOH A 79 256 256 HOH HOH . F 4 HOH A 80 257 257 HOH HOH . F 4 HOH A 81 258 258 HOH HOH . F 4 HOH A 82 259 259 HOH HOH . F 4 HOH A 83 260 260 HOH HOH . F 4 HOH A 84 263 263 HOH HOH . F 4 HOH A 85 266 266 HOH HOH . F 4 HOH A 86 267 267 HOH HOH . F 4 HOH A 87 268 268 HOH HOH . F 4 HOH A 88 269 269 HOH HOH . F 4 HOH A 89 270 270 HOH HOH . F 4 HOH A 90 271 271 HOH HOH . F 4 HOH A 91 272 272 HOH HOH . F 4 HOH A 92 273 273 HOH HOH . F 4 HOH A 93 274 274 HOH HOH . F 4 HOH A 94 277 277 HOH HOH . F 4 HOH A 95 278 278 HOH HOH . F 4 HOH A 96 281 281 HOH HOH . F 4 HOH A 97 282 282 HOH HOH . F 4 HOH A 98 283 283 HOH HOH . F 4 HOH A 99 284 284 HOH HOH . F 4 HOH A 100 286 286 HOH HOH . F 4 HOH A 101 287 287 HOH HOH . F 4 HOH A 102 288 288 HOH HOH . F 4 HOH A 103 289 289 HOH HOH . F 4 HOH A 104 290 290 HOH HOH . F 4 HOH A 105 291 291 HOH HOH . F 4 HOH A 106 292 292 HOH HOH . F 4 HOH A 107 293 293 HOH HOH . F 4 HOH A 108 294 294 HOH HOH . F 4 HOH A 109 295 295 HOH HOH . F 4 HOH A 110 296 296 HOH HOH . F 4 HOH A 111 297 297 HOH HOH . F 4 HOH A 112 298 298 HOH HOH . F 4 HOH A 113 299 299 HOH HOH . F 4 HOH A 114 300 300 HOH HOH . F 4 HOH A 115 302 302 HOH HOH . F 4 HOH A 116 303 303 HOH HOH . F 4 HOH A 117 306 306 HOH HOH . F 4 HOH A 118 307 307 HOH HOH . F 4 HOH A 119 308 308 HOH HOH . F 4 HOH A 120 309 309 HOH HOH . F 4 HOH A 121 311 311 HOH HOH . F 4 HOH A 122 318 318 HOH HOH . F 4 HOH A 123 319 319 HOH HOH . F 4 HOH A 124 320 320 HOH HOH . F 4 HOH A 125 321 321 HOH HOH . F 4 HOH A 126 322 322 HOH HOH . F 4 HOH A 127 323 323 HOH HOH . F 4 HOH A 128 324 324 HOH HOH . F 4 HOH A 129 325 325 HOH HOH . F 4 HOH A 130 326 326 HOH HOH . F 4 HOH A 131 327 327 HOH HOH . F 4 HOH A 132 328 328 HOH HOH . F 4 HOH A 133 329 329 HOH HOH . F 4 HOH A 134 330 330 HOH HOH . F 4 HOH A 135 331 331 HOH HOH . F 4 HOH A 136 332 332 HOH HOH . F 4 HOH A 137 333 333 HOH HOH . F 4 HOH A 138 334 334 HOH HOH . F 4 HOH A 139 335 335 HOH HOH . F 4 HOH A 140 336 336 HOH HOH . F 4 HOH A 141 337 337 HOH HOH . F 4 HOH A 142 338 338 HOH HOH . F 4 HOH A 143 339 339 HOH HOH . F 4 HOH A 144 340 340 HOH HOH . F 4 HOH A 145 341 341 HOH HOH . F 4 HOH A 146 342 342 HOH HOH . F 4 HOH A 147 343 343 HOH HOH . F 4 HOH A 148 344 344 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BME . . . D 3 33.339 -0.477 16.334 0.5 25.36 ? C1 BME 901 A 1 HETATM 2 C C2 BME . . . D 3 32.237 -1.462 15.875 0.5 31.2 ? C2 BME 901 A 1 HETATM 3 O O1 BME . . . D 3 32.784 0.591 17.111 0.5 38.24 ? O1 BME 901 A 1 HETATM 4 S S2 BME . . . D 3 31.721 -1.245 14.174 0.5 33.03 ? S2 BME 901 A 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #