data_1C6X
#
_model_server_result.job_id            gl6VUfHIKFBDutxk72wbTg 
_model_server_result.datetime_utc      '2025-02-05 19:02:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1c6x 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":622}' 
#
_entry.id    1C6X 
#
_exptl.entry_id    1C6X 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              727.336 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-[2(S)-CYCLOPENTYL-1(R)-HYDROXY-3(R)METHYL]-5-[(2(S)-TERTIARY-BUTYLAMINO-CARBONYL)-4-(N1-(2)-(N-METHYLPIPERAZINYL)-3-CHLORO-PYRAZINYL-5-CARBONYL)-PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYL-PENTANAMIDE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1C6X 
_cell.length_a            88.21 
_cell.length_b            88.21 
_cell.length_c            32.92 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1C6X 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C37 H55 Cl N8 O5' 
_chem_comp.formula_weight    727.336 
_chem_comp.id                3IN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-[2(S)-CYCLOPENTYL-1(R)-HYDROXY-3(R)METHYL]-5-[(2(S)-TERTIARY-BUTYLAMINO-CARBONYL)-4-(N1-(2)-(N-METHYLPIPERAZINYL)-3-CHLORO-PYRAZINYL-5-CARBONYL)-PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYL-PENTANAMIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 3IN sing 1 n n 
C1 N1 3IN sing 2 n n 
C1 H11A 3IN sing 3 n n 
C1 H12 3IN sing 4 n n 
C2 C3 3IN sing 5 n n 
C2 N3 3IN sing 6 n n 
C2 H2 3IN sing 7 n n 
C3 O1 3IN doub 8 n n 
C3 N2 3IN sing 9 n n 
O4 C23 3IN sing 10 n n 
O4 HO4 3IN sing 11 n n 
O5 C31 3IN doub 12 n n 
N6 C32 3IN doub 13 n y 
N6 C33 3IN sing 14 n y 
C7 C4 3IN sing 15 n n 
C7 H71 3IN sing 16 n n 
C7 H72 3IN sing 17 n n 
C7 H73 3IN sing 18 n n 
C8 C9 3IN sing 19 n n 
C8 N3 3IN sing 20 n n 
C8 H81 3IN sing 21 n n 
C8 H82 3IN sing 22 n n 
C9 N1 3IN sing 23 n n 
C9 H91 3IN sing 24 n n 
C9 H92 3IN sing 25 n n 
C10 C11 3IN sing 26 n n 
C10 N3 3IN sing 27 n n 
C10 H101 3IN sing 28 n n 
C10 H102 3IN sing 29 n n 
C11 C12 3IN sing 30 n n 
C11 O2 3IN sing 31 n n 
C11 H11 3IN sing 32 n n 
C12 C13 3IN sing 33 n n 
C12 H121 3IN sing 34 n n 
C12 H122 3IN sing 35 n n 
C13 C14 3IN sing 36 n n 
C13 C21 3IN sing 37 n n 
C13 H13 3IN sing 38 n n 
C14 C15 3IN sing 39 n n 
C14 H141 3IN sing 40 n n 
C14 H142 3IN sing 41 n n 
C15 C16 3IN doub 42 n y 
C15 C20 3IN sing 43 n y 
C16 C17 3IN sing 44 n y 
C16 H16 3IN sing 45 n n 
C19 C20 3IN doub 46 n y 
C19 C18 3IN sing 47 n y 
C19 H19 3IN sing 48 n n 
C20 H20 3IN sing 49 n n 
C21 O3 3IN doub 50 n n 
C21 N4 3IN sing 51 n n 
C22 C30 3IN sing 52 n n 
C22 N4 3IN sing 53 n n 
C22 C23 3IN sing 54 n n 
C22 H22 3IN sing 55 n n 
C24 C23 3IN sing 56 n n 
C24 C25 3IN sing 57 n n 
C24 H241 3IN sing 58 n n 
C24 H242 3IN sing 59 n n 
C27 C26 3IN sing 60 n n 
C27 N8 3IN sing 61 n n 
C27 H271 3IN sing 62 n n 
C27 H272 3IN sing 63 n n 
C30 C25 3IN sing 64 n n 
C30 C29 3IN sing 65 n n 
C30 H30 3IN sing 66 n n 
C31 C32 3IN sing 67 n n 
C31 N1 3IN sing 68 n n 
C32 C36 3IN sing 69 n y 
C33 C34 3IN doub 70 n y 
C33 CL1 3IN sing 71 n n 
C34 N7 3IN sing 72 n y 
C34 N5 3IN sing 73 n n 
C35 N8 3IN sing 74 n n 
C35 C37 3IN sing 75 n n 
C35 H351 3IN sing 76 n n 
C35 H352 3IN sing 77 n n 
N2 C4 3IN sing 78 n n 
N2 HN2 3IN sing 79 n n 
C4 C5 3IN sing 80 n n 
C4 C6 3IN sing 81 n n 
C5 H51 3IN sing 82 n n 
C5 H52 3IN sing 83 n n 
C5 H53 3IN sing 84 n n 
C6 H61 3IN sing 85 n n 
C6 H62 3IN sing 86 n n 
C6 H63 3IN sing 87 n n 
O2 HO2 3IN sing 88 n n 
C17 C18 3IN doub 89 n y 
C17 H17 3IN sing 90 n n 
C18 H18 3IN sing 91 n n 
N4 HN4 3IN sing 92 n n 
C23 H23 3IN sing 93 n n 
C25 H251 3IN sing 94 n n 
C25 H252 3IN sing 95 n n 
C29 H291 3IN sing 96 n n 
C29 H292 3IN sing 97 n n 
C29 H293 3IN sing 98 n n 
N7 C36 3IN doub 99 n y 
C36 H36 3IN sing 100 n n 
C26 N5 3IN sing 101 n n 
C26 H261 3IN sing 102 n n 
C26 H262 3IN sing 103 n n 
N8 C28 3IN sing 104 n n 
C37 N5 3IN sing 105 n n 
C37 H371 3IN sing 106 n n 
C37 H372 3IN sing 107 n n 
C28 H281 3IN sing 108 n n 
C28 H282 3IN sing 109 n n 
C28 H283 3IN sing 110 n n 
#
_atom_sites.entry_id                     1C6X 
_atom_sites.fract_transf_matrix[1][1]    0.011336 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011336 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.030376 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 3IN B 1 622 622 3IN L73 . 
D 3 HOH A 1 303 303 HOH HOH . 
D 3 HOH A 2 306 306 HOH HOH . 
D 3 HOH A 3 309 309 HOH HOH . 
D 3 HOH A 4 312 312 HOH HOH . 
D 3 HOH A 5 313 313 HOH HOH . 
D 3 HOH A 6 314 314 HOH HOH . 
D 3 HOH A 7 322 322 HOH HOH . 
D 3 HOH A 8 323 323 HOH HOH . 
D 3 HOH A 9 324 324 HOH HOH . 
D 3 HOH A 10 325 325 HOH HOH . 
D 3 HOH A 11 327 327 HOH HOH . 
D 3 HOH A 12 328 328 HOH HOH . 
D 3 HOH A 13 330 330 HOH HOH . 
D 3 HOH A 14 331 331 HOH HOH . 
D 3 HOH A 15 333 333 HOH HOH . 
D 3 HOH A 16 336 336 HOH HOH . 
D 3 HOH A 17 337 337 HOH HOH . 
D 3 HOH A 18 338 338 HOH HOH . 
D 3 HOH A 19 341 341 HOH HOH . 
D 3 HOH A 20 347 347 HOH HOH . 
D 3 HOH A 21 351 351 HOH HOH . 
D 3 HOH A 22 352 352 HOH HOH . 
D 3 HOH A 23 353 353 HOH HOH . 
D 3 HOH A 24 355 355 HOH HOH . 
D 3 HOH A 25 356 356 HOH HOH . 
D 3 HOH A 26 357 357 HOH HOH . 
D 3 HOH A 27 359 359 HOH HOH . 
D 3 HOH A 28 362 362 HOH HOH . 
D 3 HOH A 29 363 363 HOH HOH . 
D 3 HOH A 30 365 365 HOH HOH . 
D 3 HOH A 31 366 366 HOH HOH . 
D 3 HOH A 32 367 367 HOH HOH . 
D 3 HOH A 33 444 444 HOH HOH . 
E 3 HOH B 1 300 300 HOH HOH . 
E 3 HOH B 2 301 301 HOH HOH . 
E 3 HOH B 3 302 302 HOH HOH . 
E 3 HOH B 4 304 304 HOH HOH . 
E 3 HOH B 5 305 305 HOH HOH . 
E 3 HOH B 6 307 307 HOH HOH . 
E 3 HOH B 7 308 308 HOH HOH . 
E 3 HOH B 8 310 310 HOH HOH . 
E 3 HOH B 9 311 311 HOH HOH . 
E 3 HOH B 10 315 315 HOH HOH . 
E 3 HOH B 11 316 316 HOH HOH . 
E 3 HOH B 12 317 317 HOH HOH . 
E 3 HOH B 13 318 318 HOH HOH . 
E 3 HOH B 14 319 319 HOH HOH . 
E 3 HOH B 15 320 320 HOH HOH . 
E 3 HOH B 16 321 321 HOH HOH . 
E 3 HOH B 17 326 326 HOH HOH . 
E 3 HOH B 18 329 329 HOH HOH . 
E 3 HOH B 19 332 332 HOH HOH . 
E 3 HOH B 20 334 334 HOH HOH . 
E 3 HOH B 21 335 335 HOH HOH . 
E 3 HOH B 22 339 339 HOH HOH . 
E 3 HOH B 23 340 340 HOH HOH . 
E 3 HOH B 24 342 342 HOH HOH . 
E 3 HOH B 25 343 343 HOH HOH . 
E 3 HOH B 26 345 345 HOH HOH . 
E 3 HOH B 27 346 346 HOH HOH . 
E 3 HOH B 28 348 348 HOH HOH . 
E 3 HOH B 29 349 349 HOH HOH . 
E 3 HOH B 30 350 350 HOH HOH . 
E 3 HOH B 31 354 354 HOH HOH . 
E 3 HOH B 32 358 358 HOH HOH . 
E 3 HOH B 33 360 360 HOH HOH . 
E 3 HOH B 34 361 361 HOH HOH . 
E 3 HOH B 35 364 364 HOH HOH . 
E 3 HOH B 36 368 368 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 3IN . . . C 2 39.543 29.346 16.746 1 33.63 ? C1 3IN 622 B 1 
HETATM 2 C C2 3IN . . . C 2 40.363 28.503 17.763 1 24.48 ? C2 3IN 622 B 1 
HETATM 3 C C3 3IN . . . C 2 40.799 29.374 18.913 1 23.04 ? C3 3IN 622 B 1 
HETATM 4 O O4 3IN . . . C 2 36.285 22.588 24.249 1 27.23 ? O4 3IN 622 B 1 
HETATM 5 O O5 3IN . . . C 2 40.101 27.767 13.641 1 48.68 ? O5 3IN 622 B 1 
HETATM 6 N N6 3IN . . . C 2 39.085 31.158 13.781 0 46.22 ? N6 3IN 622 B 1 
HETATM 7 C C7 3IN . . . C 2 41.767 32.395 18.959 1 23.76 ? C7 3IN 622 B 1 
HETATM 8 C C8 3IN . . . C 2 39.383 26.51 17.032 1 23.31 ? C8 3IN 622 B 1 
HETATM 9 C C9 3IN . . . C 2 38.627 27.226 15.887 1 29.34 ? C9 3IN 622 B 1 
HETATM 10 C C10 3IN . . . C 2 40.472 26.52 18.96 1 18.45 ? C10 3IN 622 B 1 
HETATM 11 C C11 3IN . . . C 2 39.894 26.023 20.267 1 15.27 ? C11 3IN 622 B 1 
HETATM 12 C C12 3IN . . . C 2 39.727 26.878 21.498 1 18.58 ? C12 3IN 622 B 1 
HETATM 13 C C13 3IN . . . C 2 38.966 26.188 22.702 1 26.08 ? C13 3IN 622 B 1 
HETATM 14 C C14 3IN . . . C 2 39.055 27.228 23.851 1 26.41 ? C14 3IN 622 B 1 
HETATM 15 C C15 3IN . . . C 2 38.333 26.838 25.125 1 31.96 ? C15 3IN 622 B 1 
HETATM 16 C C16 3IN . . . C 2 38.978 26.099 26.126 1 32.71 ? C16 3IN 622 B 1 
HETATM 17 C C19 3IN . . . C 2 36.232 26.829 26.427 1 38.58 ? C19 3IN 622 B 1 
HETATM 18 C C20 3IN . . . C 2 37 27.232 25.297 1 35.26 ? C20 3IN 622 B 1 
HETATM 19 C C21 3IN . . . C 2 37.405 25.912 22.308 1 30.44 ? C21 3IN 622 B 1 
HETATM 20 C C22 3IN . . . C 2 35.449 24.282 22.807 1 28.15 ? C22 3IN 622 B 1 
HETATM 21 C C24 3IN . . . C 2 33.948 22.617 23.281 1 27.61 ? C24 3IN 622 B 1 
HETATM 22 C C27 3IN . . . C 2 42.016 34.212 9.654 0 45.99 ? C27 3IN 622 B 1 
HETATM 23 C C30 3IN . . . C 2 34.798 23.924 21.36 1 29.79 ? C30 3IN 622 B 1 
HETATM 24 C C31 3IN . . . C 2 39.799 28.761 14.316 1 42.16 ? C31 3IN 622 B 1 
HETATM 25 C C32 3IN . . . C 2 40.036 30.183 13.821 0 45.16 ? C32 3IN 622 B 1 
HETATM 26 C C33 3IN . . . C 2 39.364 32.34 13.152 0 47.12 ? C33 3IN 622 B 1 
HETATM 27 C C34 3IN . . . C 2 40.623 32.614 12.56 0 47.07 ? C34 3IN 622 B 1 
HETATM 28 C C35 3IN . . . C 2 42.789 35.359 11.623 0 46.12 ? C35 3IN 622 B 1 
HETATM 29 N N1 3IN . . . C 2 39.276 28.492 15.568 1 35.2 ? N1 3IN 622 B 1 
HETATM 30 O O1 3IN . . . C 2 40.08 29.481 19.909 1 22 ? O1 3IN 622 B 1 
HETATM 31 N N2 3IN . . . C 2 42.016 29.982 18.717 1 20.45 ? N2 3IN 622 B 1 
HETATM 32 C C4 3IN . . . C 2 42.529 31.163 19.42 1 19.32 ? C4 3IN 622 B 1 
HETATM 33 C C5 3IN . . . C 2 43.927 31.584 18.968 1 20.59 ? C5 3IN 622 B 1 
HETATM 34 C C6 3IN . . . C 2 42.405 30.992 20.933 1 15.27 ? C6 3IN 622 B 1 
HETATM 35 N N3 3IN . . . C 2 39.538 27.365 18.233 1 21.85 ? N3 3IN 622 B 1 
HETATM 36 O O2 3IN . . . C 2 40.802 25.04 20.631 1 17.6 ? O2 3IN 622 B 1 
HETATM 37 C C17 3IN . . . C 2 38.267 25.675 27.285 1 37.06 ? C17 3IN 622 B 1 
HETATM 38 C C18 3IN . . . C 2 36.866 25.993 27.398 1 37.62 ? C18 3IN 622 B 1 
HETATM 39 O O3 3IN . . . C 2 36.871 26.481 21.339 1 28.85 ? O3 3IN 622 B 1 
HETATM 40 N N4 3IN . . . C 2 36.72 24.997 23.093 1 30.08 ? N4 3IN 622 B 1 
HETATM 41 C C23 3IN . . . C 2 35.093 23.361 24.015 1 30.12 ? C23 3IN 622 B 1 
HETATM 42 C C25 3IN . . . C 2 34.244 22.565 21.822 1 29.46 ? C25 3IN 622 B 1 
HETATM 43 C C29 3IN . . . C 2 35.857 23.772 20.271 1 27.41 ? C29 3IN 622 B 1 
HETATM 44 N N7 3IN . . . C 2 41.577 31.663 12.65 0 47.14 ? N7 3IN 622 B 1 
HETATM 45 C C36 3IN . . . C 2 41.293 30.485 13.241 0 46.27 ? C36 3IN 622 B 1 
HETATM 46 CL CL1 3IN . . . C 2 38.134 33.573 13.076 0 13.45 ? CL1 3IN 622 B 1 
HETATM 47 C C26 3IN . . . C 2 40.725 33.749 10.367 0 46.73 ? C26 3IN 622 B 1 
HETATM 48 N N8 3IN . . . C 2 42.433 35.519 10.198 0 45.82 ? N8 3IN 622 B 1 
HETATM 49 C C37 3IN . . . C 2 41.538 34.935 12.436 0 46.83 ? C37 3IN 622 B 1 
HETATM 50 N N5 3IN . . . C 2 40.926 33.744 11.827 0 46.95 ? N5 3IN 622 B 1 
HETATM 51 C C28 3IN . . . C 2 43.553 36.066 9.419 0 45.02 ? C28 3IN 622 B 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           345 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           51 
#