data_1C84 # _model_server_result.job_id zHTOagVgBtdT6vo5WJXFQg _model_server_result.datetime_utc '2024-11-14 09:33:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1c84 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 1C84 # _exptl.entry_id 1C84 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 259.214 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-(OXALYL-AMINO)-NAPHTHALENE-2-CARBOXYLIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1C84 _cell.length_a 88.033 _cell.length_b 88.033 _cell.length_c 103.982 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1C84 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C13 H9 N O5' _chem_comp.formula_weight 259.214 _chem_comp.id 761 _chem_comp.mon_nstd_flag . _chem_comp.name '3-(OXALYL-AMINO)-NAPHTHALENE-2-CARBOXYLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 761 doub 1 n y C1 C6 761 sing 2 n y C1 H11 761 sing 3 n n C2 C3 761 sing 4 n y C2 H21 761 sing 5 n n C3 C4 761 doub 6 n y C3 C11 761 sing 7 n y C4 C5 761 sing 8 n y C4 C14 761 sing 9 n y C5 C6 761 doub 10 n y C5 H51 761 sing 11 n n C6 H61 761 sing 12 n n C11 C12 761 doub 13 n y C11 H111 761 sing 14 n n C12 C13 761 sing 15 n y C12 N20 761 sing 16 n n C13 C14 761 doub 17 n y C13 C17 761 sing 18 n n C14 H141 761 sing 19 n n C17 O18 761 doub 20 n n C17 O19 761 sing 21 n n O19 H19 761 sing 22 n n N20 C21 761 sing 23 n n N20 H20 761 sing 24 n n C21 O22 761 doub 25 n n C21 C23 761 sing 26 n n C23 O24 761 doub 27 n n C23 O25 761 sing 28 n n O25 H25 761 sing 29 n n # _atom_sites.entry_id 1C84 _atom_sites.fract_transf_matrix[1][1] 0.011359 _atom_sites.fract_transf_matrix[1][2] 0.006558 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013117 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009617 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 761 A 1 301 1 761 761 . C 3 HOH A 1 302 1 HOH HOH . C 3 HOH A 2 303 2 HOH HOH . C 3 HOH A 3 304 3 HOH HOH . C 3 HOH A 4 305 4 HOH HOH . C 3 HOH A 5 306 5 HOH HOH . C 3 HOH A 6 307 6 HOH HOH . C 3 HOH A 7 308 7 HOH HOH . C 3 HOH A 8 309 8 HOH HOH . C 3 HOH A 9 310 9 HOH HOH . C 3 HOH A 10 311 10 HOH HOH . C 3 HOH A 11 312 11 HOH HOH . C 3 HOH A 12 313 12 HOH HOH . C 3 HOH A 13 314 13 HOH HOH . C 3 HOH A 14 315 14 HOH HOH . C 3 HOH A 15 316 15 HOH HOH . C 3 HOH A 16 317 16 HOH HOH . C 3 HOH A 17 318 17 HOH HOH . C 3 HOH A 18 319 19 HOH HOH . C 3 HOH A 19 320 20 HOH HOH . C 3 HOH A 20 321 21 HOH HOH . C 3 HOH A 21 322 22 HOH HOH . C 3 HOH A 22 323 23 HOH HOH . C 3 HOH A 23 324 24 HOH HOH . C 3 HOH A 24 325 25 HOH HOH . C 3 HOH A 25 326 26 HOH HOH . C 3 HOH A 26 327 27 HOH HOH . C 3 HOH A 27 328 28 HOH HOH . C 3 HOH A 28 329 29 HOH HOH . C 3 HOH A 29 330 30 HOH HOH . C 3 HOH A 30 331 31 HOH HOH . C 3 HOH A 31 332 32 HOH HOH . C 3 HOH A 32 333 33 HOH HOH . C 3 HOH A 33 334 35 HOH HOH . C 3 HOH A 34 335 36 HOH HOH . C 3 HOH A 35 336 37 HOH HOH . C 3 HOH A 36 337 38 HOH HOH . C 3 HOH A 37 338 39 HOH HOH . C 3 HOH A 38 339 40 HOH HOH . C 3 HOH A 39 340 41 HOH HOH . C 3 HOH A 40 341 43 HOH HOH . C 3 HOH A 41 342 44 HOH HOH . C 3 HOH A 42 343 45 HOH HOH . C 3 HOH A 43 344 46 HOH HOH . C 3 HOH A 44 345 48 HOH HOH . C 3 HOH A 45 346 49 HOH HOH . C 3 HOH A 46 347 50 HOH HOH . C 3 HOH A 47 348 52 HOH HOH . C 3 HOH A 48 349 53 HOH HOH . C 3 HOH A 49 350 54 HOH HOH . C 3 HOH A 50 351 55 HOH HOH . C 3 HOH A 51 352 56 HOH HOH . C 3 HOH A 52 353 57 HOH HOH . C 3 HOH A 53 354 58 HOH HOH . C 3 HOH A 54 355 59 HOH HOH . C 3 HOH A 55 356 60 HOH HOH . C 3 HOH A 56 357 61 HOH HOH . C 3 HOH A 57 358 62 HOH HOH . C 3 HOH A 58 359 63 HOH HOH . C 3 HOH A 59 360 65 HOH HOH . C 3 HOH A 60 361 66 HOH HOH . C 3 HOH A 61 362 67 HOH HOH . C 3 HOH A 62 363 68 HOH HOH . C 3 HOH A 63 364 69 HOH HOH . C 3 HOH A 64 365 70 HOH HOH . C 3 HOH A 65 366 71 HOH HOH . C 3 HOH A 66 367 72 HOH HOH . C 3 HOH A 67 368 73 HOH HOH . C 3 HOH A 68 369 74 HOH HOH . C 3 HOH A 69 370 75 HOH HOH . C 3 HOH A 70 371 76 HOH HOH . C 3 HOH A 71 372 77 HOH HOH . C 3 HOH A 72 373 78 HOH HOH . C 3 HOH A 73 374 79 HOH HOH . C 3 HOH A 74 375 80 HOH HOH . C 3 HOH A 75 376 81 HOH HOH . C 3 HOH A 76 377 82 HOH HOH . C 3 HOH A 77 378 83 HOH HOH . C 3 HOH A 78 379 84 HOH HOH . C 3 HOH A 79 380 85 HOH HOH . C 3 HOH A 80 381 86 HOH HOH . C 3 HOH A 81 382 87 HOH HOH . C 3 HOH A 82 383 88 HOH HOH . C 3 HOH A 83 384 89 HOH HOH . C 3 HOH A 84 385 90 HOH HOH . C 3 HOH A 85 386 91 HOH HOH . C 3 HOH A 86 387 92 HOH HOH . C 3 HOH A 87 388 93 HOH HOH . C 3 HOH A 88 389 94 HOH HOH . C 3 HOH A 89 390 95 HOH HOH . C 3 HOH A 90 391 96 HOH HOH . C 3 HOH A 91 392 97 HOH HOH . C 3 HOH A 92 393 98 HOH HOH . C 3 HOH A 93 394 99 HOH HOH . C 3 HOH A 94 395 100 HOH HOH . C 3 HOH A 95 396 101 HOH HOH . C 3 HOH A 96 397 102 HOH HOH . C 3 HOH A 97 398 103 HOH HOH . C 3 HOH A 98 399 104 HOH HOH . C 3 HOH A 99 400 105 HOH HOH . C 3 HOH A 100 401 106 HOH HOH . C 3 HOH A 101 402 107 HOH HOH . C 3 HOH A 102 403 108 HOH HOH . C 3 HOH A 103 404 109 HOH HOH . C 3 HOH A 104 405 110 HOH HOH . C 3 HOH A 105 406 111 HOH HOH . C 3 HOH A 106 407 112 HOH HOH . C 3 HOH A 107 408 113 HOH HOH . C 3 HOH A 108 409 114 HOH HOH . C 3 HOH A 109 410 115 HOH HOH . C 3 HOH A 110 411 116 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 761 . . . B 2 46.112 9.845 1.106 1 32.98 ? C1 761 301 A 1 HETATM 2 C C2 761 . . . B 2 46.268 10.955 1.932 1 32.17 ? C2 761 301 A 1 HETATM 3 C C3 761 . . . B 2 45.514 12.107 1.733 1 30.05 ? C3 761 301 A 1 HETATM 4 C C4 761 . . . B 2 44.578 12.135 0.684 1 32.29 ? C4 761 301 A 1 HETATM 5 C C5 761 . . . B 2 44.407 11.005 -0.15 1 31.61 ? C5 761 301 A 1 HETATM 6 C C6 761 . . . B 2 45.161 9.862 0.08 1 32.17 ? C6 761 301 A 1 HETATM 7 C C11 761 . . . B 2 45.593 13.219 2.59 1 33.79 ? C11 761 301 A 1 HETATM 8 C C12 761 . . . B 2 44.806 14.351 2.337 1 35.87 ? C12 761 301 A 1 HETATM 9 C C13 761 . . . B 2 43.938 14.396 1.232 1 34.97 ? C13 761 301 A 1 HETATM 10 C C14 761 . . . B 2 43.828 13.275 0.392 1 31.67 ? C14 761 301 A 1 HETATM 11 C C17 761 . . . B 2 43.286 15.645 0.867 1 32.83 ? C17 761 301 A 1 HETATM 12 O O18 761 . . . B 2 43.019 16.486 1.659 1 29.61 ? O18 761 301 A 1 HETATM 13 O O19 761 . . . B 2 43.05 15.745 -0.436 1 34.65 ? O19 761 301 A 1 HETATM 14 N N20 761 . . . B 2 44.771 15.429 3.16 1 45.6 ? N20 761 301 A 1 HETATM 15 C C21 761 . . . B 2 45.196 15.554 4.434 1 53.12 ? C21 761 301 A 1 HETATM 16 O O22 761 . . . B 2 45.438 14.594 5.184 1 53.83 ? O22 761 301 A 1 HETATM 17 C C23 761 . . . B 2 45.36 17.014 4.98 1 54.98 ? C23 761 301 A 1 HETATM 18 O O24 761 . . . B 2 44.414 17.745 5.145 1 51.32 ? O24 761 301 A 1 HETATM 19 O O25 761 . . . B 2 46.63 17.376 5.342 1 59.61 ? O25 761 301 A 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 19 #