data_1C86 # _model_server_result.job_id 4tiaD5EPISDjm6CtwrSLpA _model_server_result.datetime_utc '2024-11-21 23:54:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1c86 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 1C86 # _exptl.entry_id 1C86 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 271.247 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(OXALYL-AMINO)-4,7-DIHYDRO-5H-THIENO[2,3-C]PYRAN-3-CARBOXYLIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1C86 _cell.length_a 88.274 _cell.length_b 88.274 _cell.length_c 104.501 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1C86 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H9 N O6 S' _chem_comp.formula_weight 271.247 _chem_comp.id OPA _chem_comp.mon_nstd_flag . _chem_comp.name '2-(OXALYL-AMINO)-4,7-DIHYDRO-5H-THIENO[2,3-C]PYRAN-3-CARBOXYLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 OPA sing 237 n n O1 C6 OPA sing 238 n n C2 C3 OPA sing 239 n n C2 H21 OPA sing 240 n n C2 H22A OPA sing 241 n n C3 C4 OPA doub 242 n y C3 S13 OPA sing 243 n y C4 C5 OPA sing 244 n n C4 C15 OPA sing 245 n y C5 C6 OPA sing 246 n n C5 H51 OPA sing 247 n n C5 H52 OPA sing 248 n n C6 H61 OPA sing 249 n n C6 H62 OPA sing 250 n n S13 C14 OPA sing 251 n y C14 C15 OPA doub 252 n y C14 N19 OPA sing 253 n n C15 C16 OPA sing 254 n n C16 O17 OPA sing 255 n n C16 O18 OPA doub 256 n n O17 H17 OPA sing 257 n n N19 C20 OPA sing 258 n n N19 H19 OPA sing 259 n n C20 C21 OPA sing 260 n n C20 O24 OPA doub 261 n n C21 O22 OPA sing 262 n n C21 O23 OPA doub 263 n n O22 H22 OPA sing 264 n n # _atom_sites.entry_id 1C86 _atom_sites.fract_transf_matrix[1][1] 0.011328 _atom_sites.fract_transf_matrix[1][2] 0.00654 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013081 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009569 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OPA A 1 301 1 OPA OPA . C 3 HOH A 1 302 1 HOH HOH . C 3 HOH A 2 303 2 HOH HOH . C 3 HOH A 3 304 3 HOH HOH . C 3 HOH A 4 305 4 HOH HOH . C 3 HOH A 5 306 5 HOH HOH . C 3 HOH A 6 307 6 HOH HOH . C 3 HOH A 7 308 7 HOH HOH . C 3 HOH A 8 309 8 HOH HOH . C 3 HOH A 9 310 9 HOH HOH . C 3 HOH A 10 311 10 HOH HOH . C 3 HOH A 11 312 11 HOH HOH . C 3 HOH A 12 313 12 HOH HOH . C 3 HOH A 13 314 13 HOH HOH . C 3 HOH A 14 315 14 HOH HOH . C 3 HOH A 15 316 15 HOH HOH . C 3 HOH A 16 317 16 HOH HOH . C 3 HOH A 17 318 17 HOH HOH . C 3 HOH A 18 319 18 HOH HOH . C 3 HOH A 19 320 19 HOH HOH . C 3 HOH A 20 321 20 HOH HOH . C 3 HOH A 21 322 21 HOH HOH . C 3 HOH A 22 323 22 HOH HOH . C 3 HOH A 23 324 23 HOH HOH . C 3 HOH A 24 325 24 HOH HOH . C 3 HOH A 25 326 25 HOH HOH . C 3 HOH A 26 327 26 HOH HOH . C 3 HOH A 27 328 27 HOH HOH . C 3 HOH A 28 329 28 HOH HOH . C 3 HOH A 29 330 29 HOH HOH . C 3 HOH A 30 331 30 HOH HOH . C 3 HOH A 31 332 31 HOH HOH . C 3 HOH A 32 333 32 HOH HOH . C 3 HOH A 33 334 33 HOH HOH . C 3 HOH A 34 335 34 HOH HOH . C 3 HOH A 35 336 35 HOH HOH . C 3 HOH A 36 337 36 HOH HOH . C 3 HOH A 37 338 37 HOH HOH . C 3 HOH A 38 339 38 HOH HOH . C 3 HOH A 39 340 39 HOH HOH . C 3 HOH A 40 341 40 HOH HOH . C 3 HOH A 41 342 41 HOH HOH . C 3 HOH A 42 343 42 HOH HOH . C 3 HOH A 43 344 43 HOH HOH . C 3 HOH A 44 345 44 HOH HOH . C 3 HOH A 45 346 45 HOH HOH . C 3 HOH A 46 347 46 HOH HOH . C 3 HOH A 47 348 47 HOH HOH . C 3 HOH A 48 349 48 HOH HOH . C 3 HOH A 49 350 49 HOH HOH . C 3 HOH A 50 351 50 HOH HOH . C 3 HOH A 51 352 52 HOH HOH . C 3 HOH A 52 353 53 HOH HOH . C 3 HOH A 53 354 54 HOH HOH . C 3 HOH A 54 355 55 HOH HOH . C 3 HOH A 55 356 56 HOH HOH . C 3 HOH A 56 357 57 HOH HOH . C 3 HOH A 57 358 59 HOH HOH . C 3 HOH A 58 359 60 HOH HOH . C 3 HOH A 59 360 61 HOH HOH . C 3 HOH A 60 361 62 HOH HOH . C 3 HOH A 61 362 63 HOH HOH . C 3 HOH A 62 363 64 HOH HOH . C 3 HOH A 63 364 65 HOH HOH . C 3 HOH A 64 365 66 HOH HOH . C 3 HOH A 65 366 67 HOH HOH . C 3 HOH A 66 367 68 HOH HOH . C 3 HOH A 67 368 69 HOH HOH . C 3 HOH A 68 369 70 HOH HOH . C 3 HOH A 69 370 71 HOH HOH . C 3 HOH A 70 371 72 HOH HOH . C 3 HOH A 71 372 73 HOH HOH . C 3 HOH A 72 373 74 HOH HOH . C 3 HOH A 73 374 75 HOH HOH . C 3 HOH A 74 375 76 HOH HOH . C 3 HOH A 75 376 77 HOH HOH . C 3 HOH A 76 377 78 HOH HOH . C 3 HOH A 77 378 79 HOH HOH . C 3 HOH A 78 379 81 HOH HOH . C 3 HOH A 79 380 82 HOH HOH . C 3 HOH A 80 381 83 HOH HOH . C 3 HOH A 81 382 84 HOH HOH . C 3 HOH A 82 383 85 HOH HOH . C 3 HOH A 83 384 86 HOH HOH . C 3 HOH A 84 385 87 HOH HOH . C 3 HOH A 85 386 88 HOH HOH . C 3 HOH A 86 387 89 HOH HOH . C 3 HOH A 87 388 90 HOH HOH . C 3 HOH A 88 389 91 HOH HOH . C 3 HOH A 89 390 92 HOH HOH . C 3 HOH A 90 391 93 HOH HOH . C 3 HOH A 91 392 94 HOH HOH . C 3 HOH A 92 393 95 HOH HOH . C 3 HOH A 93 394 96 HOH HOH . C 3 HOH A 94 395 97 HOH HOH . C 3 HOH A 95 396 98 HOH HOH . C 3 HOH A 96 397 99 HOH HOH . C 3 HOH A 97 398 100 HOH HOH . C 3 HOH A 98 399 101 HOH HOH . C 3 HOH A 99 400 102 HOH HOH . C 3 HOH A 100 401 103 HOH HOH . C 3 HOH A 101 402 104 HOH HOH . C 3 HOH A 102 403 105 HOH HOH . C 3 HOH A 103 404 106 HOH HOH . C 3 HOH A 104 405 107 HOH HOH . C 3 HOH A 105 406 108 HOH HOH . C 3 HOH A 106 407 109 HOH HOH . C 3 HOH A 107 408 110 HOH HOH . C 3 HOH A 108 409 111 HOH HOH . C 3 HOH A 109 410 112 HOH HOH . C 3 HOH A 110 411 113 HOH HOH . C 3 HOH A 111 412 114 HOH HOH . C 3 HOH A 112 413 115 HOH HOH . C 3 HOH A 113 414 116 HOH HOH . C 3 HOH A 114 415 117 HOH HOH . C 3 HOH A 115 416 118 HOH HOH . C 3 HOH A 116 417 119 HOH HOH . C 3 HOH A 117 418 120 HOH HOH . C 3 HOH A 118 419 121 HOH HOH . C 3 HOH A 119 420 122 HOH HOH . C 3 HOH A 120 421 123 HOH HOH . C 3 HOH A 121 422 124 HOH HOH . C 3 HOH A 122 423 125 HOH HOH . C 3 HOH A 123 424 126 HOH HOH . C 3 HOH A 124 425 127 HOH HOH . C 3 HOH A 125 426 128 HOH HOH . C 3 HOH A 126 427 129 HOH HOH . C 3 HOH A 127 428 130 HOH HOH . C 3 HOH A 128 429 131 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 OPA . . . B 2 13.889 44.907 17.351 1 18.66 ? O1 OPA 301 A 1 HETATM 2 C C2 OPA . . . B 2 13.84 45.511 18.643 1 17.63 ? C2 OPA 301 A 1 HETATM 3 C C3 OPA . . . B 2 12.469 45.752 19.056 1 19.91 ? C3 OPA 301 A 1 HETATM 4 C C4 OPA . . . B 2 11.293 45.421 18.172 1 19.3 ? C4 OPA 301 A 1 HETATM 5 C C5 OPA . . . B 2 11.447 44.715 16.919 1 15.72 ? C5 OPA 301 A 1 HETATM 6 C C6 OPA . . . B 2 12.802 44.028 17.001 1 18.06 ? C6 OPA 301 A 1 HETATM 7 S S13 OPA . . . B 2 11.975 46.431 20.565 1 18.94 ? S13 OPA 301 A 1 HETATM 8 C C14 OPA . . . B 2 10.303 46.212 20.159 1 19.92 ? C14 OPA 301 A 1 HETATM 9 C C15 OPA . . . B 2 10.095 45.877 18.795 1 19.41 ? C15 OPA 301 A 1 HETATM 10 C C16 OPA . . . B 2 8.801 45.86 18.315 1 18.36 ? C16 OPA 301 A 1 HETATM 11 O O17 OPA . . . B 2 7.63 45.682 19.049 1 19.83 ? O17 OPA 301 A 1 HETATM 12 O O18 OPA . . . B 2 8.426 45.771 16.998 1 18.94 ? O18 OPA 301 A 1 HETATM 13 N N19 OPA . . . B 2 9.282 46.788 20.902 1 24.64 ? N19 OPA 301 A 1 HETATM 14 C C20 OPA . . . B 2 9.302 47.329 22.18 1 27.33 ? C20 OPA 301 A 1 HETATM 15 C C21 OPA . . . B 2 8.087 47.656 22.84 1 28.15 ? C21 OPA 301 A 1 HETATM 16 O O22 OPA . . . B 2 6.939 46.786 22.794 1 27.53 ? O22 OPA 301 A 1 HETATM 17 O O23 OPA . . . B 2 7.934 48.73 23.679 1 31.01 ? O23 OPA 301 A 1 HETATM 18 O O24 OPA . . . B 2 10.573 47.516 22.854 1 21.9 ? O24 OPA 301 A 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 253 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 18 #