data_1C9D # _model_server_result.job_id c5xzg4YfVTxrAoRNpaTRzg _model_server_result.datetime_utc '2025-02-26 15:22:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1c9d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":270}' # _entry.id 1C9D # _exptl.entry_id 1C9D _exptl.method 'X-RAY DIFFRACTION' # _entity.details 'METAL COFACTOR BOUND AT THE BETA SUBUNIT' _entity.formula_weight 278.237 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXY-4-FLUOROPHENYLTHIO)-BUTYLPHOSPHONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.43 _cell.angle_gamma 90 _cell.entry_id 1C9D _cell.length_a 184.22 _cell.length_b 60.52 _cell.length_c 67.79 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1C9D _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,y,-z -1 0 0 0 1 0 0 0 -1 184.22 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B NZ LYS 87 B LYS 87 1_555 E C4A PLP . B PLP 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.409 ? metalc ? metalc1 B O GLY 232 B GLY 232 1_555 D NA NA . B NA 1191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc2 B O PHE 306 B PHE 306 1_555 D NA NA . B NA 1191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc3 B O SER 308 B SER 308 1_555 D NA NA . B NA 1191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.511 ? metalc ? metalc4 G O HOH . B HOH 1028 1_555 D NA NA . B NA 1191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc5 G O HOH . B HOH 1131 1_555 D NA NA . B NA 1191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? # _chem_comp.formula 'C10 H12 F O4 P S' _chem_comp.formula_weight 278.237 _chem_comp.id HF1 _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXY-4-FLUOROPHENYLTHIO)-BUTYLPHOSPHONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P1 O3 HF1 doub 129 n n P1 O1 HF1 sing 130 n n P1 O2 HF1 sing 131 n n P1 C1 HF1 sing 132 n n O1 HO1 HF1 sing 133 n n O2 HO2 HF1 sing 134 n n C2 C4 HF1 sing 135 n n C2 C1 HF1 doub 136 e n C2 H2 HF1 sing 137 n n C3 S1 HF1 sing 138 n n C3 C4 HF1 sing 139 n n C3 H31 HF1 sing 140 n n C3 H32 HF1 sing 141 n n C9 C8 HF1 doub 142 n y C9 C10 HF1 sing 143 n y C9 H9 HF1 sing 144 n n C8 C7 HF1 sing 145 n y C8 S1 HF1 sing 146 n n C7 OH HF1 sing 147 n n C7 C6 HF1 doub 148 n y OH HO7 HF1 sing 149 n n C6 C5 HF1 sing 150 n y C6 H6 HF1 sing 151 n n C5 C10 HF1 doub 152 n y C5 H5 HF1 sing 153 n n C10 F HF1 sing 154 n n C4 H41 HF1 sing 155 n n C4 H42 HF1 sing 156 n n C1 H1 HF1 sing 157 n n # _atom_sites.entry_id 1C9D _atom_sites.fract_transf_matrix[1][1] 0.005428 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000421 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016523 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014796 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HF1 A 1 270 270 HF1 HF1 . D 4 NA B 1 1191 1191 NA NA . E 5 PLP B 1 900 900 PLP PLP . F 6 HOH A 1 1002 1002 HOH HOH . F 6 HOH A 2 1003 1003 HOH HOH . F 6 HOH A 3 1005 1005 HOH HOH . F 6 HOH A 4 1010 1010 HOH HOH . F 6 HOH A 5 1017 1017 HOH HOH . F 6 HOH A 6 1019 1019 HOH HOH . F 6 HOH A 7 1024 1024 HOH HOH . F 6 HOH A 8 1031 1031 HOH HOH . F 6 HOH A 9 1032 1032 HOH HOH . F 6 HOH A 10 1035 1035 HOH HOH . F 6 HOH A 11 1039 1039 HOH HOH . F 6 HOH A 12 1040 1040 HOH HOH . F 6 HOH A 13 1046 1046 HOH HOH . F 6 HOH A 14 1049 1049 HOH HOH . F 6 HOH A 15 1051 1051 HOH HOH . F 6 HOH A 16 1053 1053 HOH HOH . F 6 HOH A 17 1054 1054 HOH HOH . F 6 HOH A 18 1057 1057 HOH HOH . F 6 HOH A 19 1059 1059 HOH HOH . F 6 HOH A 20 1063 1063 HOH HOH . F 6 HOH A 21 1066 1066 HOH HOH . F 6 HOH A 22 1069 1069 HOH HOH . F 6 HOH A 23 1070 1070 HOH HOH . F 6 HOH A 24 1071 1071 HOH HOH . F 6 HOH A 25 1076 1076 HOH HOH . F 6 HOH A 26 1079 1079 HOH HOH . F 6 HOH A 27 1080 1080 HOH HOH . F 6 HOH A 28 1081 1081 HOH HOH . F 6 HOH A 29 1082 1082 HOH HOH . F 6 HOH A 30 1084 1084 HOH HOH . F 6 HOH A 31 1085 1085 HOH HOH . F 6 HOH A 32 1088 1088 HOH HOH . F 6 HOH A 33 1090 1090 HOH HOH . F 6 HOH A 34 1091 1091 HOH HOH . F 6 HOH A 35 1095 1095 HOH HOH . F 6 HOH A 36 1096 1096 HOH HOH . F 6 HOH A 37 1097 1097 HOH HOH . F 6 HOH A 38 1101 1101 HOH HOH . F 6 HOH A 39 1103 1103 HOH HOH . F 6 HOH A 40 1106 1106 HOH HOH . F 6 HOH A 41 1107 1107 HOH HOH . F 6 HOH A 42 1112 1112 HOH HOH . F 6 HOH A 43 1113 1113 HOH HOH . F 6 HOH A 44 1120 1120 HOH HOH . F 6 HOH A 45 1123 1123 HOH HOH . F 6 HOH A 46 1125 1125 HOH HOH . F 6 HOH A 47 1126 1126 HOH HOH . F 6 HOH A 48 1127 1127 HOH HOH . F 6 HOH A 49 1130 1130 HOH HOH . F 6 HOH A 50 1132 1132 HOH HOH . F 6 HOH A 51 1133 1133 HOH HOH . F 6 HOH A 52 1136 1136 HOH HOH . F 6 HOH A 53 1141 1141 HOH HOH . F 6 HOH A 54 1145 1145 HOH HOH . F 6 HOH A 55 1149 1149 HOH HOH . F 6 HOH A 56 1152 1152 HOH HOH . F 6 HOH A 57 1156 1156 HOH HOH . F 6 HOH A 58 1157 1157 HOH HOH . F 6 HOH A 59 1159 1159 HOH HOH . F 6 HOH A 60 1160 1160 HOH HOH . F 6 HOH A 61 1161 1161 HOH HOH . F 6 HOH A 62 1164 1164 HOH HOH . F 6 HOH A 63 1165 1165 HOH HOH . F 6 HOH A 64 1166 1166 HOH HOH . F 6 HOH A 65 1168 1168 HOH HOH . F 6 HOH A 66 1169 1169 HOH HOH . F 6 HOH A 67 1171 1171 HOH HOH . F 6 HOH A 68 1173 1173 HOH HOH . F 6 HOH A 69 1175 1175 HOH HOH . F 6 HOH A 70 1178 1178 HOH HOH . F 6 HOH A 71 1180 1180 HOH HOH . F 6 HOH A 72 1182 1182 HOH HOH . F 6 HOH A 73 1184 1184 HOH HOH . F 6 HOH A 74 1187 1187 HOH HOH . F 6 HOH A 75 1189 1189 HOH HOH . G 6 HOH B 1 1001 1001 HOH HOH . G 6 HOH B 2 1004 1004 HOH HOH . G 6 HOH B 3 1006 1006 HOH HOH . G 6 HOH B 4 1007 1007 HOH HOH . G 6 HOH B 5 1008 1008 HOH HOH . G 6 HOH B 6 1009 1009 HOH HOH . G 6 HOH B 7 1011 1011 HOH HOH . G 6 HOH B 8 1012 1012 HOH HOH . G 6 HOH B 9 1013 1013 HOH HOH . G 6 HOH B 10 1014 1014 HOH HOH . G 6 HOH B 11 1015 1015 HOH HOH . G 6 HOH B 12 1016 1016 HOH HOH . G 6 HOH B 13 1018 1018 HOH HOH . G 6 HOH B 14 1020 1020 HOH HOH . G 6 HOH B 15 1021 1021 HOH HOH . G 6 HOH B 16 1022 1022 HOH HOH . G 6 HOH B 17 1023 1023 HOH HOH . G 6 HOH B 18 1025 1025 HOH HOH . G 6 HOH B 19 1026 1026 HOH HOH . G 6 HOH B 20 1027 1027 HOH HOH . G 6 HOH B 21 1028 1028 HOH HOH . G 6 HOH B 22 1029 1029 HOH HOH . G 6 HOH B 23 1030 1030 HOH HOH . G 6 HOH B 24 1033 1033 HOH HOH . G 6 HOH B 25 1034 1034 HOH HOH . G 6 HOH B 26 1036 1036 HOH HOH . G 6 HOH B 27 1037 1037 HOH HOH . G 6 HOH B 28 1038 1038 HOH HOH . G 6 HOH B 29 1041 1041 HOH HOH . G 6 HOH B 30 1042 1042 HOH HOH . G 6 HOH B 31 1043 1043 HOH HOH . G 6 HOH B 32 1044 1044 HOH HOH . G 6 HOH B 33 1045 1045 HOH HOH . G 6 HOH B 34 1047 1047 HOH HOH . G 6 HOH B 35 1048 1048 HOH HOH . G 6 HOH B 36 1050 1050 HOH HOH . G 6 HOH B 37 1052 1052 HOH HOH . G 6 HOH B 38 1055 1055 HOH HOH . G 6 HOH B 39 1056 1056 HOH HOH . G 6 HOH B 40 1058 1058 HOH HOH . G 6 HOH B 41 1060 1060 HOH HOH . G 6 HOH B 42 1061 1061 HOH HOH . G 6 HOH B 43 1062 1062 HOH HOH . G 6 HOH B 44 1064 1064 HOH HOH . G 6 HOH B 45 1065 1065 HOH HOH . G 6 HOH B 46 1067 1067 HOH HOH . G 6 HOH B 47 1068 1068 HOH HOH . G 6 HOH B 48 1072 1072 HOH HOH . G 6 HOH B 49 1073 1073 HOH HOH . G 6 HOH B 50 1074 1074 HOH HOH . G 6 HOH B 51 1075 1075 HOH HOH . G 6 HOH B 52 1077 1077 HOH HOH . G 6 HOH B 53 1078 1078 HOH HOH . G 6 HOH B 54 1083 1083 HOH HOH . G 6 HOH B 55 1087 1087 HOH HOH . G 6 HOH B 56 1089 1089 HOH HOH . G 6 HOH B 57 1092 1092 HOH HOH . G 6 HOH B 58 1093 1093 HOH HOH . G 6 HOH B 59 1094 1094 HOH HOH . G 6 HOH B 60 1098 1098 HOH HOH . G 6 HOH B 61 1099 1099 HOH HOH . G 6 HOH B 62 1100 1100 HOH HOH . G 6 HOH B 63 1102 1102 HOH HOH . G 6 HOH B 64 1104 1104 HOH HOH . G 6 HOH B 65 1105 1105 HOH HOH . G 6 HOH B 66 1108 1108 HOH HOH . G 6 HOH B 67 1110 1110 HOH HOH . G 6 HOH B 68 1111 1111 HOH HOH . G 6 HOH B 69 1114 1114 HOH HOH . G 6 HOH B 70 1115 1115 HOH HOH . G 6 HOH B 71 1116 1116 HOH HOH . G 6 HOH B 72 1117 1117 HOH HOH . G 6 HOH B 73 1118 1118 HOH HOH . G 6 HOH B 74 1119 1119 HOH HOH . G 6 HOH B 75 1121 1121 HOH HOH . G 6 HOH B 76 1122 1122 HOH HOH . G 6 HOH B 77 1124 1124 HOH HOH . G 6 HOH B 78 1128 1128 HOH HOH . G 6 HOH B 79 1129 1129 HOH HOH . G 6 HOH B 80 1131 1131 HOH HOH . G 6 HOH B 81 1134 1134 HOH HOH . G 6 HOH B 82 1135 1135 HOH HOH . G 6 HOH B 83 1137 1137 HOH HOH . G 6 HOH B 84 1138 1138 HOH HOH . G 6 HOH B 85 1139 1139 HOH HOH . G 6 HOH B 86 1140 1140 HOH HOH . G 6 HOH B 87 1142 1142 HOH HOH . G 6 HOH B 88 1143 1143 HOH HOH . G 6 HOH B 89 1144 1144 HOH HOH . G 6 HOH B 90 1146 1146 HOH HOH . G 6 HOH B 91 1147 1147 HOH HOH . G 6 HOH B 92 1148 1148 HOH HOH . G 6 HOH B 93 1150 1150 HOH HOH . G 6 HOH B 94 1151 1151 HOH HOH . G 6 HOH B 95 1153 1153 HOH HOH . G 6 HOH B 96 1154 1154 HOH HOH . G 6 HOH B 97 1155 1155 HOH HOH . G 6 HOH B 98 1158 1158 HOH HOH . G 6 HOH B 99 1162 1162 HOH HOH . G 6 HOH B 100 1163 1163 HOH HOH . G 6 HOH B 101 1167 1167 HOH HOH . G 6 HOH B 102 1170 1170 HOH HOH . G 6 HOH B 103 1172 1172 HOH HOH . G 6 HOH B 104 1174 1174 HOH HOH . G 6 HOH B 105 1176 1176 HOH HOH . G 6 HOH B 106 1177 1177 HOH HOH . G 6 HOH B 107 1179 1179 HOH HOH . G 6 HOH B 108 1181 1181 HOH HOH . G 6 HOH B 109 1183 1183 HOH HOH . G 6 HOH B 110 1185 1185 HOH HOH . G 6 HOH B 111 1186 1186 HOH HOH . G 6 HOH B 112 1188 1188 HOH HOH . G 6 HOH B 113 1190 1190 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P1 HF1 . . . C 3 48.638 29.68 9.896 1 20.25 ? P1 HF1 270 A 1 HETATM 2 O O3 HF1 . . . C 3 47.412 30.405 9.87 1 15.78 ? O3 HF1 270 A 1 HETATM 3 O O1 HF1 . . . C 3 48.722 28.861 8.76 1 14.97 ? O1 HF1 270 A 1 HETATM 4 O O2 HF1 . . . C 3 49.706 30.585 9.937 1 12.38 ? O2 HF1 270 A 1 HETATM 5 C C2 HF1 . . . C 3 48.667 29.448 12.714 1 13.56 ? C2 HF1 270 A 1 HETATM 6 C C3 HF1 . . . C 3 48.339 27.94 14.741 1 14.91 ? C3 HF1 270 A 1 HETATM 7 C C9 HF1 . . . C 3 49.965 24.763 15.632 1 9.61 ? C9 HF1 270 A 1 HETATM 8 C C8 HF1 . . . C 3 50.347 26.126 15.716 1 11.75 ? C8 HF1 270 A 1 HETATM 9 C C7 HF1 . . . C 3 51.705 26.519 15.385 1 10.1 ? C7 HF1 270 A 1 HETATM 10 O OH HF1 . . . C 3 52.137 27.875 15.457 1 11.72 ? OH HF1 270 A 1 HETATM 11 C C6 HF1 . . . C 3 52.629 25.532 14.987 1 9.1 ? C6 HF1 270 A 1 HETATM 12 C C5 HF1 . . . C 3 52.226 24.172 14.911 1 10.07 ? C5 HF1 270 A 1 HETATM 13 C C10 HF1 . . . C 3 50.885 23.796 15.239 1 9.78 ? C10 HF1 270 A 1 HETATM 14 F F HF1 . . . C 3 50.5 22.476 15.166 1 12.8 ? F HF1 270 A 1 HETATM 15 S S1 HF1 . . . C 3 49.087 27.293 16.243 1 10.71 ? S1 HF1 270 A 1 HETATM 16 C C4 HF1 . . . C 3 49.298 28.868 13.996 1 13.28 ? C4 HF1 270 A 1 HETATM 17 C C1 HF1 . . . C 3 48.721 28.631 11.421 1 13.33 ? C1 HF1 270 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 235 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 17 #