data_1C9P # _model_server_result.job_id t2fNVNzqdTRvqRfSoMIw5A _model_server_result.datetime_utc '2025-09-09 14:43:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1c9p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 1C9P # _exptl.entry_id 1C9P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1C9P _cell.length_a 63.33 _cell.length_b 63.33 _cell.length_c 130.61 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1C9P _symmetry.cell_setting tetragonal _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 137 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf2 A SG CYS 25 A CYS 42 1_555 A SG CYS 41 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf3 A SG CYS 109 A CYS 128 1_555 A SG CYS 210 A CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 A SG CYS 116 A CYS 136 1_555 A SG CYS 183 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf5 A SG CYS 148 A CYS 168 1_555 A SG CYS 162 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf6 A SG CYS 173 A CYS 191 1_555 A SG CYS 197 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf7 B SG CYS 10 B CYS 10 1_555 B SG CYS 21 B CYS 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf8 B SG CYS 15 B CYS 15 1_555 B SG CYS 26 B CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf9 B SG CYS 28 B CYS 28 1_555 B SG CYS 48 B CYS 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf10 B SG CYS 33 B CYS 33 1_555 B SG CYS 52 B CYS 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf11 B SG CYS 37 B CYS 37 1_555 B SG CYS 54 B CYS 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? covale ? covale1 A C LEU 96 A LEU 114 1_555 A N IAS 97 A IAS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 A CG IAS 97 A IAS 115 1_555 A N SER 98 A SER 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? metalc ? metalc1 A OE1 GLU 52 A GLU 70 1_555 C CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? metalc ? metalc2 A O ASN 54 A ASN 72 1_555 C CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? metalc ? metalc3 A O VAL 57 A VAL 75 1_555 C CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc4 A OE2 GLU 62 A GLU 80 1_555 C CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.748 ? metalc ? metalc5 C CA CA . A CA 501 1_555 D O HOH . A HOH 590 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.35 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1C9P _atom_sites.fract_transf_matrix[1][1] 0.01579 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01579 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007656 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA A 1 501 1 CA CA . D 4 HOH A 1 502 1 HOH HOH . D 4 HOH A 2 503 2 HOH HOH . D 4 HOH A 3 504 3 HOH HOH . D 4 HOH A 4 505 4 HOH HOH . D 4 HOH A 5 506 5 HOH HOH . D 4 HOH A 6 507 6 HOH HOH . D 4 HOH A 7 508 7 HOH HOH . D 4 HOH A 8 509 8 HOH HOH . D 4 HOH A 9 510 9 HOH HOH . D 4 HOH A 10 511 10 HOH HOH . D 4 HOH A 11 512 11 HOH HOH . D 4 HOH A 12 513 12 HOH HOH . D 4 HOH A 13 514 13 HOH HOH . D 4 HOH A 14 515 14 HOH HOH . D 4 HOH A 15 516 15 HOH HOH . D 4 HOH A 16 517 16 HOH HOH . D 4 HOH A 17 518 17 HOH HOH . D 4 HOH A 18 519 19 HOH HOH . D 4 HOH A 19 520 21 HOH HOH . D 4 HOH A 20 521 22 HOH HOH . D 4 HOH A 21 522 23 HOH HOH . D 4 HOH A 22 523 24 HOH HOH . D 4 HOH A 23 524 25 HOH HOH . D 4 HOH A 24 525 26 HOH HOH . D 4 HOH A 25 526 27 HOH HOH . D 4 HOH A 26 527 28 HOH HOH . D 4 HOH A 27 528 29 HOH HOH . D 4 HOH A 28 529 30 HOH HOH . D 4 HOH A 29 530 31 HOH HOH . D 4 HOH A 30 531 32 HOH HOH . D 4 HOH A 31 532 33 HOH HOH . D 4 HOH A 32 533 34 HOH HOH . D 4 HOH A 33 534 35 HOH HOH . D 4 HOH A 34 535 36 HOH HOH . D 4 HOH A 35 536 37 HOH HOH . D 4 HOH A 36 537 38 HOH HOH . D 4 HOH A 37 538 39 HOH HOH . D 4 HOH A 38 539 40 HOH HOH . D 4 HOH A 39 540 41 HOH HOH . D 4 HOH A 40 541 42 HOH HOH . D 4 HOH A 41 542 43 HOH HOH . D 4 HOH A 42 543 44 HOH HOH . D 4 HOH A 43 544 45 HOH HOH . D 4 HOH A 44 545 46 HOH HOH . D 4 HOH A 45 546 47 HOH HOH . D 4 HOH A 46 547 48 HOH HOH . D 4 HOH A 47 548 49 HOH HOH . D 4 HOH A 48 549 51 HOH HOH . D 4 HOH A 49 550 55 HOH HOH . D 4 HOH A 50 551 56 HOH HOH . D 4 HOH A 51 552 57 HOH HOH . D 4 HOH A 52 553 58 HOH HOH . D 4 HOH A 53 554 59 HOH HOH . D 4 HOH A 54 555 60 HOH HOH . D 4 HOH A 55 556 61 HOH HOH . D 4 HOH A 56 557 62 HOH HOH . D 4 HOH A 57 558 63 HOH HOH . D 4 HOH A 58 559 64 HOH HOH . D 4 HOH A 59 560 65 HOH HOH . D 4 HOH A 60 561 66 HOH HOH . D 4 HOH A 61 562 67 HOH HOH . D 4 HOH A 62 563 68 HOH HOH . D 4 HOH A 63 564 69 HOH HOH . D 4 HOH A 64 565 70 HOH HOH . D 4 HOH A 65 566 71 HOH HOH . D 4 HOH A 66 567 72 HOH HOH . D 4 HOH A 67 568 73 HOH HOH . D 4 HOH A 68 569 74 HOH HOH . D 4 HOH A 69 570 75 HOH HOH . D 4 HOH A 70 571 76 HOH HOH . D 4 HOH A 71 572 77 HOH HOH . D 4 HOH A 72 573 78 HOH HOH . D 4 HOH A 73 574 79 HOH HOH . D 4 HOH A 74 575 80 HOH HOH . D 4 HOH A 75 576 81 HOH HOH . D 4 HOH A 76 577 82 HOH HOH . D 4 HOH A 77 578 83 HOH HOH . D 4 HOH A 78 579 84 HOH HOH . D 4 HOH A 79 580 85 HOH HOH . D 4 HOH A 80 581 86 HOH HOH . D 4 HOH A 81 582 87 HOH HOH . D 4 HOH A 82 583 88 HOH HOH . D 4 HOH A 83 584 90 HOH HOH . D 4 HOH A 84 585 91 HOH HOH . D 4 HOH A 85 586 92 HOH HOH . D 4 HOH A 86 587 93 HOH HOH . D 4 HOH A 87 588 94 HOH HOH . D 4 HOH A 88 589 95 HOH HOH . D 4 HOH A 89 590 96 HOH HOH . D 4 HOH A 90 591 97 HOH HOH . D 4 HOH A 91 592 98 HOH HOH . D 4 HOH A 92 593 99 HOH HOH . D 4 HOH A 93 594 100 HOH HOH . D 4 HOH A 94 595 101 HOH HOH . D 4 HOH A 95 596 102 HOH HOH . D 4 HOH A 96 597 103 HOH HOH . D 4 HOH A 97 598 105 HOH HOH . D 4 HOH A 98 599 106 HOH HOH . D 4 HOH A 99 600 107 HOH HOH . D 4 HOH A 100 601 108 HOH HOH . D 4 HOH A 101 602 109 HOH HOH . D 4 HOH A 102 603 112 HOH HOH . D 4 HOH A 103 604 113 HOH HOH . D 4 HOH A 104 605 114 HOH HOH . D 4 HOH A 105 606 115 HOH HOH . D 4 HOH A 106 607 116 HOH HOH . D 4 HOH A 107 608 117 HOH HOH . D 4 HOH A 108 609 118 HOH HOH . D 4 HOH A 109 610 119 HOH HOH . D 4 HOH A 110 611 120 HOH HOH . D 4 HOH A 111 612 121 HOH HOH . D 4 HOH A 112 613 122 HOH HOH . D 4 HOH A 113 614 123 HOH HOH . D 4 HOH A 114 615 124 HOH HOH . D 4 HOH A 115 616 125 HOH HOH . D 4 HOH A 116 617 126 HOH HOH . D 4 HOH A 117 618 127 HOH HOH . D 4 HOH A 118 619 128 HOH HOH . D 4 HOH A 119 620 130 HOH HOH . D 4 HOH A 120 621 131 HOH HOH . E 4 HOH B 1 60 18 HOH HOH . E 4 HOH B 2 61 20 HOH HOH . E 4 HOH B 3 62 50 HOH HOH . E 4 HOH B 4 63 52 HOH HOH . E 4 HOH B 5 64 53 HOH HOH . E 4 HOH B 6 65 54 HOH HOH . E 4 HOH B 7 66 89 HOH HOH . E 4 HOH B 8 67 104 HOH HOH . E 4 HOH B 9 68 110 HOH HOH . E 4 HOH B 10 69 111 HOH HOH . E 4 HOH B 11 70 129 HOH HOH . E 4 HOH B 12 71 132 HOH HOH . E 4 HOH B 13 72 133 HOH HOH . E 4 HOH B 14 73 134 HOH HOH . E 4 HOH B 15 74 135 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 16.222 _atom_site.Cartn_y 38.486 _atom_site.Cartn_z 42.444 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 31 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #