data_1CCI
#
_model_server_result.job_id            SFh6bhurrxx75RbdqYe-2w 
_model_server_result.datetime_utc      '2024-11-14 16:06:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1cci 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":499}' 
#
_entry.id    1CCI 
#
_exptl.entry_id    1CCI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              97.138 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2,3-DIMETHYLIMIDAZOLIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1CCI 
_cell.length_a            107.72 
_cell.length_b            76.63 
_cell.length_c            51.68 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1CCI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 175 A HIS 175 1_555 C FE HEM . A HEM 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? 
metalc ? metalc2 D O HOH . A HOH 313 1_555 C FE HEM . A HEM 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.762 ? 
#
_chem_comp.formula           'C5 H9 N2 1' 
_chem_comp.formula_weight    97.138 
_chem_comp.id                DMI 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2,3-DIMETHYLIMIDAZOLIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 DMI doub 83 n y 
N1 C5 DMI sing 84 n y 
N1 HN1 DMI sing 85 n n 
C2 CM2 DMI sing 86 n n 
C2 N3 DMI sing 87 n y 
CM2 HM21 DMI sing 88 n n 
CM2 HM22 DMI sing 89 n n 
CM2 HM23 DMI sing 90 n n 
N3 CM3 DMI sing 91 n n 
N3 C4 DMI sing 92 n y 
CM3 HM31 DMI sing 93 n n 
CM3 HM32 DMI sing 94 n n 
CM3 HM33 DMI sing 95 n n 
C4 C5 DMI doub 96 n y 
C4 H4 DMI sing 97 n n 
C5 H5 DMI sing 98 n n 
#
_atom_sites.entry_id                     1CCI 
_atom_sites.fract_transf_matrix[1][1]    0.009283 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01305 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01935 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 DMI A 1 499 499 DMI DMI . 
C 3 HEM A 1 500 1 HEM HEM . 
D 4 HOH A 1 300 300 HOH HOH . 
D 4 HOH A 2 301 301 HOH HOH . 
D 4 HOH A 3 302 302 HOH HOH . 
D 4 HOH A 4 304 304 HOH HOH . 
D 4 HOH A 5 305 305 HOH HOH . 
D 4 HOH A 6 306 306 HOH HOH . 
D 4 HOH A 7 307 307 HOH HOH . 
D 4 HOH A 8 309 309 HOH HOH . 
D 4 HOH A 9 310 310 HOH HOH . 
D 4 HOH A 10 311 311 HOH HOH . 
D 4 HOH A 11 312 312 HOH HOH . 
D 4 HOH A 12 313 313 HOH HOH . 
D 4 HOH A 13 314 314 HOH HOH . 
D 4 HOH A 14 315 315 HOH HOH . 
D 4 HOH A 15 316 316 HOH HOH . 
D 4 HOH A 16 317 317 HOH HOH . 
D 4 HOH A 17 318 318 HOH HOH . 
D 4 HOH A 18 319 319 HOH HOH . 
D 4 HOH A 19 320 320 HOH HOH . 
D 4 HOH A 20 321 321 HOH HOH . 
D 4 HOH A 21 322 322 HOH HOH . 
D 4 HOH A 22 323 323 HOH HOH . 
D 4 HOH A 23 324 324 HOH HOH . 
D 4 HOH A 24 325 325 HOH HOH . 
D 4 HOH A 25 326 326 HOH HOH . 
D 4 HOH A 26 327 327 HOH HOH . 
D 4 HOH A 27 328 328 HOH HOH . 
D 4 HOH A 28 329 329 HOH HOH . 
D 4 HOH A 29 330 330 HOH HOH . 
D 4 HOH A 30 331 331 HOH HOH . 
D 4 HOH A 31 332 332 HOH HOH . 
D 4 HOH A 32 333 333 HOH HOH . 
D 4 HOH A 33 334 334 HOH HOH . 
D 4 HOH A 34 335 335 HOH HOH . 
D 4 HOH A 35 336 336 HOH HOH . 
D 4 HOH A 36 337 337 HOH HOH . 
D 4 HOH A 37 338 338 HOH HOH . 
D 4 HOH A 38 339 339 HOH HOH . 
D 4 HOH A 39 340 340 HOH HOH . 
D 4 HOH A 40 341 341 HOH HOH . 
D 4 HOH A 41 342 342 HOH HOH . 
D 4 HOH A 42 344 344 HOH HOH . 
D 4 HOH A 43 345 345 HOH HOH . 
D 4 HOH A 44 346 346 HOH HOH . 
D 4 HOH A 45 347 347 HOH HOH . 
D 4 HOH A 46 348 348 HOH HOH . 
D 4 HOH A 47 349 349 HOH HOH . 
D 4 HOH A 48 350 350 HOH HOH . 
D 4 HOH A 49 355 355 HOH HOH . 
D 4 HOH A 50 356 356 HOH HOH . 
D 4 HOH A 51 357 357 HOH HOH . 
D 4 HOH A 52 358 358 HOH HOH . 
D 4 HOH A 53 359 359 HOH HOH . 
D 4 HOH A 54 406 406 HOH HOH . 
D 4 HOH A 55 408 408 HOH HOH . 
D 4 HOH A 56 409 409 HOH HOH . 
D 4 HOH A 57 410 410 HOH HOH . 
D 4 HOH A 58 411 411 HOH HOH . 
D 4 HOH A 59 412 412 HOH HOH . 
D 4 HOH A 60 413 413 HOH HOH . 
D 4 HOH A 61 414 414 HOH HOH . 
D 4 HOH A 62 415 415 HOH HOH . 
D 4 HOH A 63 416 416 HOH HOH . 
D 4 HOH A 64 417 417 HOH HOH . 
D 4 HOH A 65 418 418 HOH HOH . 
D 4 HOH A 66 419 419 HOH HOH . 
D 4 HOH A 67 420 420 HOH HOH . 
D 4 HOH A 68 421 421 HOH HOH . 
D 4 HOH A 69 422 422 HOH HOH . 
D 4 HOH A 70 423 423 HOH HOH . 
D 4 HOH A 71 424 424 HOH HOH . 
D 4 HOH A 72 425 425 HOH HOH . 
D 4 HOH A 73 426 426 HOH HOH . 
D 4 HOH A 74 427 427 HOH HOH . 
D 4 HOH A 75 428 428 HOH HOH . 
D 4 HOH A 76 429 429 HOH HOH . 
D 4 HOH A 77 430 430 HOH HOH . 
D 4 HOH A 78 431 431 HOH HOH . 
D 4 HOH A 79 432 432 HOH HOH . 
D 4 HOH A 80 433 433 HOH HOH . 
D 4 HOH A 81 434 434 HOH HOH . 
D 4 HOH A 82 435 435 HOH HOH . 
D 4 HOH A 83 436 436 HOH HOH . 
D 4 HOH A 84 437 437 HOH HOH . 
D 4 HOH A 85 438 438 HOH HOH . 
D 4 HOH A 86 439 439 HOH HOH . 
D 4 HOH A 87 440 440 HOH HOH . 
D 4 HOH A 88 441 441 HOH HOH . 
D 4 HOH A 89 443 443 HOH HOH . 
D 4 HOH A 90 444 444 HOH HOH . 
D 4 HOH A 91 445 445 HOH HOH . 
D 4 HOH A 92 446 446 HOH HOH . 
D 4 HOH A 93 447 447 HOH HOH . 
D 4 HOH A 94 448 448 HOH HOH . 
D 4 HOH A 95 449 449 HOH HOH . 
D 4 HOH A 96 450 450 HOH HOH . 
D 4 HOH A 97 451 451 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 DMI . . . B 2 32.651 93.673 48.861 1 35.49 ? N1 DMI 499 A 1 
HETATM 2 C C2 DMI . . . B 2 32.702 93.284 47.604 1 36.43 ? C2 DMI 499 A 1 
HETATM 3 C CM2 DMI . . . B 2 33.779 92.475 46.998 1 34.36 ? CM2 DMI 499 A 1 
HETATM 4 N N3 DMI . . . B 2 31.581 93.728 47.045 1 36.67 ? N3 DMI 499 A 1 
HETATM 5 C CM3 DMI . . . B 2 31.167 93.503 45.625 1 34.99 ? CM3 DMI 499 A 1 
HETATM 6 C C4 DMI . . . B 2 30.843 94.395 47.888 1 35.9 ? C4 DMI 499 A 1 
HETATM 7 C C5 DMI . . . B 2 31.547 94.358 49.077 1 36.88 ? C5 DMI 499 A 1 
HETATM 8 H HN1 DMI . . . B 2 33.408 93.605 49.478 1 20 ? HN1 DMI 499 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    36 
_model_server_stats.query_time_ms           306 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           8 
#