data_1CCI
#
_model_server_result.job_id            9dMMCqw450Dy-LYbRfq-pw 
_model_server_result.datetime_utc      '2024-11-14 15:56:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1cci 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":500}' 
#
_entry.id    1CCI 
#
_exptl.entry_id    1CCI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1CCI 
_cell.length_a            107.72 
_cell.length_b            76.63 
_cell.length_c            51.68 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1CCI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 175 A HIS 175 1_555 C FE HEM . A HEM 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? 
metalc ? metalc2 D O HOH . A HOH 313 1_555 C FE HEM . A HEM 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.762 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 145 n n 
CHA C4D HEM doub 146 n n 
CHA HHA HEM sing 147 n n 
CHB C4A HEM sing 148 n n 
CHB C1B HEM doub 149 n n 
CHB HHB HEM sing 150 n n 
CHC C4B HEM sing 151 n n 
CHC C1C HEM doub 152 n n 
CHC HHC HEM sing 153 n n 
CHD C4C HEM doub 154 n n 
CHD C1D HEM sing 155 n n 
CHD HHD HEM sing 156 n n 
C1A C2A HEM doub 157 n y 
C1A NA HEM sing 158 n y 
C2A C3A HEM sing 159 n y 
C2A CAA HEM sing 160 n n 
C3A C4A HEM doub 161 n y 
C3A CMA HEM sing 162 n n 
C4A NA HEM sing 163 n y 
CMA HMA HEM sing 164 n n 
CMA HMAA HEM sing 165 n n 
CMA HMAB HEM sing 166 n n 
CAA CBA HEM sing 167 n n 
CAA HAA HEM sing 168 n n 
CAA HAAA HEM sing 169 n n 
CBA CGA HEM sing 170 n n 
CBA HBA HEM sing 171 n n 
CBA HBAA HEM sing 172 n n 
CGA O1A HEM doub 173 n n 
CGA O2A HEM sing 174 n n 
C1B C2B HEM sing 175 n n 
C1B NB HEM sing 176 n n 
C2B C3B HEM doub 177 n n 
C2B CMB HEM sing 178 n n 
C3B C4B HEM sing 179 n n 
C3B CAB HEM sing 180 n n 
C4B NB HEM doub 181 n n 
CMB HMB HEM sing 182 n n 
CMB HMBA HEM sing 183 n n 
CMB HMBB HEM sing 184 n n 
CAB CBB HEM doub 185 n n 
CAB HAB HEM sing 186 n n 
CBB HBB HEM sing 187 n n 
CBB HBBA HEM sing 188 n n 
C1C C2C HEM sing 189 n y 
C1C NC HEM sing 190 n y 
C2C C3C HEM doub 191 n y 
C2C CMC HEM sing 192 n n 
C3C C4C HEM sing 193 n y 
C3C CAC HEM sing 194 n n 
C4C NC HEM sing 195 n y 
CMC HMC HEM sing 196 n n 
CMC HMCA HEM sing 197 n n 
CMC HMCB HEM sing 198 n n 
CAC CBC HEM doub 199 n n 
CAC HAC HEM sing 200 n n 
CBC HBC HEM sing 201 n n 
CBC HBCA HEM sing 202 n n 
C1D C2D HEM sing 203 n n 
C1D ND HEM doub 204 n n 
C2D C3D HEM doub 205 n n 
C2D CMD HEM sing 206 n n 
C3D C4D HEM sing 207 n n 
C3D CAD HEM sing 208 n n 
C4D ND HEM sing 209 n n 
CMD HMD HEM sing 210 n n 
CMD HMDA HEM sing 211 n n 
CMD HMDB HEM sing 212 n n 
CAD CBD HEM sing 213 n n 
CAD HAD HEM sing 214 n n 
CAD HADA HEM sing 215 n n 
CBD CGD HEM sing 216 n n 
CBD HBD HEM sing 217 n n 
CBD HBDA HEM sing 218 n n 
CGD O1D HEM doub 219 n n 
CGD O2D HEM sing 220 n n 
O2A H2A HEM sing 221 n n 
O2D H2D HEM sing 222 n n 
FE NA HEM sing 223 n n 
FE NB HEM sing 224 n n 
FE NC HEM sing 225 n n 
FE ND HEM sing 226 n n 
#
_atom_sites.entry_id                     1CCI 
_atom_sites.fract_transf_matrix[1][1]    0.009283 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01305 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01935 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 DMI A 1 499 499 DMI DMI . 
C 3 HEM A 1 500 1 HEM HEM . 
D 4 HOH A 1 300 300 HOH HOH . 
D 4 HOH A 2 301 301 HOH HOH . 
D 4 HOH A 3 302 302 HOH HOH . 
D 4 HOH A 4 304 304 HOH HOH . 
D 4 HOH A 5 305 305 HOH HOH . 
D 4 HOH A 6 306 306 HOH HOH . 
D 4 HOH A 7 307 307 HOH HOH . 
D 4 HOH A 8 309 309 HOH HOH . 
D 4 HOH A 9 310 310 HOH HOH . 
D 4 HOH A 10 311 311 HOH HOH . 
D 4 HOH A 11 312 312 HOH HOH . 
D 4 HOH A 12 313 313 HOH HOH . 
D 4 HOH A 13 314 314 HOH HOH . 
D 4 HOH A 14 315 315 HOH HOH . 
D 4 HOH A 15 316 316 HOH HOH . 
D 4 HOH A 16 317 317 HOH HOH . 
D 4 HOH A 17 318 318 HOH HOH . 
D 4 HOH A 18 319 319 HOH HOH . 
D 4 HOH A 19 320 320 HOH HOH . 
D 4 HOH A 20 321 321 HOH HOH . 
D 4 HOH A 21 322 322 HOH HOH . 
D 4 HOH A 22 323 323 HOH HOH . 
D 4 HOH A 23 324 324 HOH HOH . 
D 4 HOH A 24 325 325 HOH HOH . 
D 4 HOH A 25 326 326 HOH HOH . 
D 4 HOH A 26 327 327 HOH HOH . 
D 4 HOH A 27 328 328 HOH HOH . 
D 4 HOH A 28 329 329 HOH HOH . 
D 4 HOH A 29 330 330 HOH HOH . 
D 4 HOH A 30 331 331 HOH HOH . 
D 4 HOH A 31 332 332 HOH HOH . 
D 4 HOH A 32 333 333 HOH HOH . 
D 4 HOH A 33 334 334 HOH HOH . 
D 4 HOH A 34 335 335 HOH HOH . 
D 4 HOH A 35 336 336 HOH HOH . 
D 4 HOH A 36 337 337 HOH HOH . 
D 4 HOH A 37 338 338 HOH HOH . 
D 4 HOH A 38 339 339 HOH HOH . 
D 4 HOH A 39 340 340 HOH HOH . 
D 4 HOH A 40 341 341 HOH HOH . 
D 4 HOH A 41 342 342 HOH HOH . 
D 4 HOH A 42 344 344 HOH HOH . 
D 4 HOH A 43 345 345 HOH HOH . 
D 4 HOH A 44 346 346 HOH HOH . 
D 4 HOH A 45 347 347 HOH HOH . 
D 4 HOH A 46 348 348 HOH HOH . 
D 4 HOH A 47 349 349 HOH HOH . 
D 4 HOH A 48 350 350 HOH HOH . 
D 4 HOH A 49 355 355 HOH HOH . 
D 4 HOH A 50 356 356 HOH HOH . 
D 4 HOH A 51 357 357 HOH HOH . 
D 4 HOH A 52 358 358 HOH HOH . 
D 4 HOH A 53 359 359 HOH HOH . 
D 4 HOH A 54 406 406 HOH HOH . 
D 4 HOH A 55 408 408 HOH HOH . 
D 4 HOH A 56 409 409 HOH HOH . 
D 4 HOH A 57 410 410 HOH HOH . 
D 4 HOH A 58 411 411 HOH HOH . 
D 4 HOH A 59 412 412 HOH HOH . 
D 4 HOH A 60 413 413 HOH HOH . 
D 4 HOH A 61 414 414 HOH HOH . 
D 4 HOH A 62 415 415 HOH HOH . 
D 4 HOH A 63 416 416 HOH HOH . 
D 4 HOH A 64 417 417 HOH HOH . 
D 4 HOH A 65 418 418 HOH HOH . 
D 4 HOH A 66 419 419 HOH HOH . 
D 4 HOH A 67 420 420 HOH HOH . 
D 4 HOH A 68 421 421 HOH HOH . 
D 4 HOH A 69 422 422 HOH HOH . 
D 4 HOH A 70 423 423 HOH HOH . 
D 4 HOH A 71 424 424 HOH HOH . 
D 4 HOH A 72 425 425 HOH HOH . 
D 4 HOH A 73 426 426 HOH HOH . 
D 4 HOH A 74 427 427 HOH HOH . 
D 4 HOH A 75 428 428 HOH HOH . 
D 4 HOH A 76 429 429 HOH HOH . 
D 4 HOH A 77 430 430 HOH HOH . 
D 4 HOH A 78 431 431 HOH HOH . 
D 4 HOH A 79 432 432 HOH HOH . 
D 4 HOH A 80 433 433 HOH HOH . 
D 4 HOH A 81 434 434 HOH HOH . 
D 4 HOH A 82 435 435 HOH HOH . 
D 4 HOH A 83 436 436 HOH HOH . 
D 4 HOH A 84 437 437 HOH HOH . 
D 4 HOH A 85 438 438 HOH HOH . 
D 4 HOH A 86 439 439 HOH HOH . 
D 4 HOH A 87 440 440 HOH HOH . 
D 4 HOH A 88 441 441 HOH HOH . 
D 4 HOH A 89 443 443 HOH HOH . 
D 4 HOH A 90 444 444 HOH HOH . 
D 4 HOH A 91 445 445 HOH HOH . 
D 4 HOH A 92 446 446 HOH HOH . 
D 4 HOH A 93 447 447 HOH HOH . 
D 4 HOH A 94 448 448 HOH HOH . 
D 4 HOH A 95 449 449 HOH HOH . 
D 4 HOH A 96 450 450 HOH HOH . 
D 4 HOH A 97 451 451 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . C 3 27.986 96.052 50.109 1 21.25 ? CHA HEM 500 A 1 
HETATM 2 C CHB HEM . . . C 3 30.388 96.183 54.241 1 22.26 ? CHB HEM 500 A 1 
HETATM 3 C CHC HEM . . . C 3 28.35 92.051 55.552 1 20.28 ? CHC HEM 500 A 1 
HETATM 4 C CHD HEM . . . C 3 25.766 92.052 51.512 1 16.94 ? CHD HEM 500 A 1 
HETATM 5 C C1A HEM . . . C 3 28.946 96.434 51.066 1 22.75 ? C1A HEM 500 A 1 
HETATM 6 C C2A HEM . . . C 3 29.68 97.613 51.039 1 21.62 ? C2A HEM 500 A 1 
HETATM 7 C C3A HEM . . . C 3 30.41 97.636 52.226 1 22.63 ? C3A HEM 500 A 1 
HETATM 8 C C4A HEM . . . C 3 30.011 96.504 52.919 1 21.94 ? C4A HEM 500 A 1 
HETATM 9 C CMA HEM . . . C 3 31.447 98.665 52.668 1 20.35 ? CMA HEM 500 A 1 
HETATM 10 C CAA HEM . . . C 3 29.617 98.692 49.973 1 21.67 ? CAA HEM 500 A 1 
HETATM 11 C CBA HEM . . . C 3 28.52 99.741 50.219 1 22.4 ? CBA HEM 500 A 1 
HETATM 12 C CGA HEM . . . C 3 28.492 100.858 49.188 1 25.44 ? CGA HEM 500 A 1 
HETATM 13 O O1A HEM . . . C 3 29.473 101.567 49.065 1 25.83 ? O1A HEM 500 A 1 
HETATM 14 O O2A HEM . . . C 3 27.508 101.061 48.472 1 24.76 ? O2A HEM 500 A 1 
HETATM 15 C C1B HEM . . . C 3 30.114 95.015 54.987 1 21.49 ? C1B HEM 500 A 1 
HETATM 16 C C2B HEM . . . C 3 30.771 94.636 56.157 1 25.11 ? C2B HEM 500 A 1 
HETATM 17 C C3B HEM . . . C 3 30.2 93.385 56.509 1 21.38 ? C3B HEM 500 A 1 
HETATM 18 C C4B HEM . . . C 3 29.22 93.147 55.561 1 19.81 ? C4B HEM 500 A 1 
HETATM 19 C CMB HEM . . . C 3 31.927 95.428 56.786 1 14.48 ? CMB HEM 500 A 1 
HETATM 20 C CAB HEM . . . C 3 30.532 92.458 57.498 1 19.62 ? CAB HEM 500 A 1 
HETATM 21 C CBB HEM . . . C 3 31.746 92.42 58.309 1 19.57 ? CBB HEM 500 A 1 
HETATM 22 C C1C HEM . . . C 3 27.383 91.69 54.595 1 22.18 ? C1C HEM 500 A 1 
HETATM 23 C C2C HEM . . . C 3 26.549 90.581 54.713 1 18.95 ? C2C HEM 500 A 1 
HETATM 24 C C3C HEM . . . C 3 25.698 90.671 53.587 1 18.22 ? C3C HEM 500 A 1 
HETATM 25 C C4C HEM . . . C 3 26.2 91.713 52.808 1 22.74 ? C4C HEM 500 A 1 
HETATM 26 C CMC HEM . . . C 3 26.584 89.623 55.921 1 12.4 ? CMC HEM 500 A 1 
HETATM 27 C CAC HEM . . . C 3 24.556 89.95 53.198 1 22.61 ? CAC HEM 500 A 1 
HETATM 28 C CBC HEM . . . C 3 23.933 88.766 53.793 1 17.96 ? CBC HEM 500 A 1 
HETATM 29 C C1D HEM . . . C 3 26.156 93.133 50.707 1 18.46 ? C1D HEM 500 A 1 
HETATM 30 C C2D HEM . . . C 3 25.697 93.375 49.417 1 18.55 ? C2D HEM 500 A 1 
HETATM 31 C C3D HEM . . . C 3 26.311 94.571 49.027 1 15.63 ? C3D HEM 500 A 1 
HETATM 32 C C4D HEM . . . C 3 27.133 94.937 50.076 1 18.71 ? C4D HEM 500 A 1 
HETATM 33 C CMD HEM . . . C 3 24.773 92.454 48.605 1 10.3 ? CMD HEM 500 A 1 
HETATM 34 C CAD HEM . . . C 3 26.209 95.264 47.682 1 18.47 ? CAD HEM 500 A 1 
HETATM 35 C CBD HEM . . . C 3 25.419 96.571 47.68 1 17.13 ? CBD HEM 500 A 1 
HETATM 36 C CGD HEM . . . C 3 25.277 97.259 46.317 1 22.63 ? CGD HEM 500 A 1 
HETATM 37 O O1D HEM . . . C 3 24.869 98.418 46.268 1 20.73 ? O1D HEM 500 A 1 
HETATM 38 O O2D HEM . . . C 3 25.56 96.664 45.277 1 24.89 ? O2D HEM 500 A 1 
HETATM 39 N NA HEM . . . C 3 29.247 95.715 52.151 1 20.78 ? NA HEM 500 A 1 
HETATM 40 N NB HEM . . . C 3 29.239 94.081 54.604 1 20.23 ? NB HEM 500 A 1 
HETATM 41 N NC HEM . . . C 3 27.15 92.394 53.468 1 24.35 ? NC HEM 500 A 1 
HETATM 42 N ND HEM . . . C 3 27.052 94.059 51.076 1 21.59 ? ND HEM 500 A 1 
HETATM 43 FE FE HEM . . . C 3 28.177 94.095 52.822 1 20.77 ? FE HEM 500 A 1 
#
_model_server_stats.io_time_ms              63 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           271 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           43 
#