data_1CE5
#
_model_server_result.job_id            21dwwwQ1XVjhURaBKAybow 
_model_server_result.datetime_utc      '2024-11-01 09:26:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1ce5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":703}' 
#
_entry.id    1CE5 
#
_exptl.entry_id    1CE5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              120.152 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            BENZAMIDINE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1CE5 
_cell.length_a            63.787 
_cell.length_b            63.264 
_cell.length_c            69.249 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1CE5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 137 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf2 A SG CYS 25 A CYS 42 1_555 A SG CYS 41 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf3 A SG CYS 109 A CYS 128 1_555 A SG CYS 210 A CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf4 A SG CYS 116 A CYS 136 1_555 A SG CYS 183 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf5 A SG CYS 148 A CYS 168 1_555 A SG CYS 162 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf6 A SG CYS 173 A CYS 191 1_555 A SG CYS 197 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
metalc ? metalc1 B CA CA . A CA 1 1_555 A OE1 GLU 52 A GLU 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? 
metalc ? metalc2 B CA CA . A CA 1 1_555 A O ASN 54 A ASN 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? 
metalc ? metalc3 B CA CA . A CA 1 1_555 A O VAL 57 A VAL 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? 
metalc ? metalc4 B CA CA . A CA 1 1_555 A OE2 GLU 62 A GLU 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? 
metalc ? metalc5 B CA CA . A CA 1 1_555 F O HOH . A HOH 717 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? 
metalc ? metalc6 B CA CA . A CA 1 1_555 F O HOH . A HOH 727 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? 
#
_chem_comp.formula           'C7 H8 N2' 
_chem_comp.formula_weight    120.152 
_chem_comp.id                BEN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              BENZAMIDINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 BEN doub 70 n y 
C1 C6 BEN sing 71 n y 
C1 C BEN sing 72 n n 
C2 C3 BEN sing 73 n y 
C2 H2 BEN sing 74 n n 
C3 C4 BEN doub 75 n y 
C3 H3 BEN sing 76 n n 
C4 C5 BEN sing 77 n y 
C4 H4 BEN sing 78 n n 
C5 C6 BEN doub 79 n y 
C5 H5 BEN sing 80 n n 
C6 H6 BEN sing 81 n n 
C N1 BEN doub 82 e n 
C N2 BEN sing 83 n n 
N1 HN1 BEN sing 84 n n 
N2 HN21 BEN sing 85 n n 
N2 HN22 BEN sing 86 n n 
#
_atom_sites.entry_id                     1CE5 
_atom_sites.fract_transf_matrix[1][1]    0.015677 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015807 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014441 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CA A 1 1 1 CA CA . 
C 3 CL A 1 2 2 CL CL . 
D 4 SO4 A 1 702 702 SO4 SO4 . 
E 5 BEN A 1 703 1 BEN BEN . 
F 6 HOH A 1 704 2 HOH HOH . 
F 6 HOH A 2 705 3 HOH HOH . 
F 6 HOH A 3 706 4 HOH HOH . 
F 6 HOH A 4 707 5 HOH HOH . 
F 6 HOH A 5 708 6 HOH HOH . 
F 6 HOH A 6 709 7 HOH HOH . 
F 6 HOH A 7 710 8 HOH HOH . 
F 6 HOH A 8 711 9 HOH HOH . 
F 6 HOH A 9 712 10 HOH HOH . 
F 6 HOH A 10 713 11 HOH HOH . 
F 6 HOH A 11 714 12 HOH HOH . 
F 6 HOH A 12 715 13 HOH HOH . 
F 6 HOH A 13 716 14 HOH HOH . 
F 6 HOH A 14 717 16 HOH HOH . 
F 6 HOH A 15 718 18 HOH HOH . 
F 6 HOH A 16 719 19 HOH HOH . 
F 6 HOH A 17 720 21 HOH HOH . 
F 6 HOH A 18 721 22 HOH HOH . 
F 6 HOH A 19 722 23 HOH HOH . 
F 6 HOH A 20 723 24 HOH HOH . 
F 6 HOH A 21 724 25 HOH HOH . 
F 6 HOH A 22 725 26 HOH HOH . 
F 6 HOH A 23 726 27 HOH HOH . 
F 6 HOH A 24 727 28 HOH HOH . 
F 6 HOH A 25 728 29 HOH HOH . 
F 6 HOH A 26 729 30 HOH HOH . 
F 6 HOH A 27 730 32 HOH HOH . 
F 6 HOH A 28 731 33 HOH HOH . 
F 6 HOH A 29 732 34 HOH HOH . 
F 6 HOH A 30 733 35 HOH HOH . 
F 6 HOH A 31 734 36 HOH HOH . 
F 6 HOH A 32 735 37 HOH HOH . 
F 6 HOH A 33 736 38 HOH HOH . 
F 6 HOH A 34 737 39 HOH HOH . 
F 6 HOH A 35 738 40 HOH HOH . 
F 6 HOH A 36 739 42 HOH HOH . 
F 6 HOH A 37 740 43 HOH HOH . 
F 6 HOH A 38 741 44 HOH HOH . 
F 6 HOH A 39 742 45 HOH HOH . 
F 6 HOH A 40 743 47 HOH HOH . 
F 6 HOH A 41 744 48 HOH HOH . 
F 6 HOH A 42 745 49 HOH HOH . 
F 6 HOH A 43 746 50 HOH HOH . 
F 6 HOH A 44 747 51 HOH HOH . 
F 6 HOH A 45 748 52 HOH HOH . 
F 6 HOH A 46 749 53 HOH HOH . 
F 6 HOH A 47 750 54 HOH HOH . 
F 6 HOH A 48 751 55 HOH HOH . 
F 6 HOH A 49 752 57 HOH HOH . 
F 6 HOH A 50 753 58 HOH HOH . 
F 6 HOH A 51 754 59 HOH HOH . 
F 6 HOH A 52 755 60 HOH HOH . 
F 6 HOH A 53 756 61 HOH HOH . 
F 6 HOH A 54 757 62 HOH HOH . 
F 6 HOH A 55 758 63 HOH HOH . 
F 6 HOH A 56 759 64 HOH HOH . 
F 6 HOH A 57 760 66 HOH HOH . 
F 6 HOH A 58 761 67 HOH HOH . 
F 6 HOH A 59 762 69 HOH HOH . 
F 6 HOH A 60 763 70 HOH HOH . 
F 6 HOH A 61 764 72 HOH HOH . 
F 6 HOH A 62 765 73 HOH HOH . 
F 6 HOH A 63 766 74 HOH HOH . 
F 6 HOH A 64 767 75 HOH HOH . 
F 6 HOH A 65 768 76 HOH HOH . 
F 6 HOH A 66 769 77 HOH HOH . 
F 6 HOH A 67 770 78 HOH HOH . 
F 6 HOH A 68 771 79 HOH HOH . 
F 6 HOH A 69 772 80 HOH HOH . 
F 6 HOH A 70 773 81 HOH HOH . 
F 6 HOH A 71 774 83 HOH HOH . 
F 6 HOH A 72 775 84 HOH HOH . 
F 6 HOH A 73 776 85 HOH HOH . 
F 6 HOH A 74 777 87 HOH HOH . 
F 6 HOH A 75 778 88 HOH HOH . 
F 6 HOH A 76 779 92 HOH HOH . 
F 6 HOH A 77 780 93 HOH HOH . 
F 6 HOH A 78 781 95 HOH HOH . 
F 6 HOH A 79 782 96 HOH HOH . 
F 6 HOH A 80 783 97 HOH HOH . 
F 6 HOH A 81 784 99 HOH HOH . 
F 6 HOH A 82 785 100 HOH HOH . 
F 6 HOH A 83 786 101 HOH HOH . 
F 6 HOH A 84 787 103 HOH HOH . 
F 6 HOH A 85 788 105 HOH HOH . 
F 6 HOH A 86 789 106 HOH HOH . 
F 6 HOH A 87 790 107 HOH HOH . 
F 6 HOH A 88 791 108 HOH HOH . 
F 6 HOH A 89 792 109 HOH HOH . 
F 6 HOH A 90 793 110 HOH HOH . 
F 6 HOH A 91 794 111 HOH HOH . 
F 6 HOH A 92 795 112 HOH HOH . 
F 6 HOH A 93 796 113 HOH HOH . 
F 6 HOH A 94 797 114 HOH HOH . 
F 6 HOH A 95 798 116 HOH HOH . 
F 6 HOH A 96 799 117 HOH HOH . 
F 6 HOH A 97 800 118 HOH HOH . 
F 6 HOH A 98 801 120 HOH HOH . 
F 6 HOH A 99 802 123 HOH HOH . 
F 6 HOH A 100 803 124 HOH HOH . 
F 6 HOH A 101 804 126 HOH HOH . 
F 6 HOH A 102 805 128 HOH HOH . 
F 6 HOH A 103 806 131 HOH HOH . 
F 6 HOH A 104 807 132 HOH HOH . 
F 6 HOH A 105 808 133 HOH HOH . 
F 6 HOH A 106 809 134 HOH HOH . 
F 6 HOH A 107 810 135 HOH HOH . 
F 6 HOH A 108 811 136 HOH HOH . 
F 6 HOH A 109 812 137 HOH HOH . 
F 6 HOH A 110 813 138 HOH HOH . 
F 6 HOH A 111 814 141 HOH HOH . 
F 6 HOH A 112 815 143 HOH HOH . 
F 6 HOH A 113 816 145 HOH HOH . 
F 6 HOH A 114 817 146 HOH HOH . 
F 6 HOH A 115 818 147 HOH HOH . 
F 6 HOH A 116 819 148 HOH HOH . 
F 6 HOH A 117 820 149 HOH HOH . 
F 6 HOH A 118 821 150 HOH HOH . 
F 6 HOH A 119 822 152 HOH HOH . 
F 6 HOH A 120 823 153 HOH HOH . 
F 6 HOH A 121 824 154 HOH HOH . 
F 6 HOH A 122 825 155 HOH HOH . 
F 6 HOH A 123 826 156 HOH HOH . 
F 6 HOH A 124 827 158 HOH HOH . 
F 6 HOH A 125 828 161 HOH HOH . 
F 6 HOH A 126 829 166 HOH HOH . 
F 6 HOH A 127 830 169 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 BEN . . . E 5 12.112 28.631 26.215 1 18.27 ? C1 BEN 703 A 1 
HETATM 2 C C2 BEN . . . E 5 11.407 27.948 27.343 1 21.33 ? C2 BEN 703 A 1 
HETATM 3 C C3 BEN . . . E 5 11.257 28.592 28.655 1 24.31 ? C3 BEN 703 A 1 
HETATM 4 C C4 BEN . . . E 5 11.744 29.965 28.85 1 20.56 ? C4 BEN 703 A 1 
HETATM 5 C C5 BEN . . . E 5 12.39 30.687 27.757 1 22.17 ? C5 BEN 703 A 1 
HETATM 6 C C6 BEN . . . E 5 12.616 30.016 26.474 1 19.2 ? C6 BEN 703 A 1 
HETATM 7 C C BEN . . . E 5 12.353 27.968 24.949 1 21.08 ? C BEN 703 A 1 
HETATM 8 N N1 BEN . . . E 5 12.763 28.6 23.825 1 15.3 ? N1 BEN 703 A 1 
HETATM 9 N N2 BEN . . . E 5 12.192 26.64 24.749 1 20.51 ? N2 BEN 703 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    22 
_model_server_stats.query_time_ms           314 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           9 
#