data_1CEB
#
_model_server_result.job_id            a3fUK5mjFYS8tF7NS31sVA 
_model_server_result.datetime_utc      '2024-11-04 23:26:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1ceb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":90}' 
#
_entry.id    1CEB 
#
_exptl.entry_id    1CEB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              157.21 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'TRANS-4-AMINOMETHYLCYCLOHEXANE-1-CARBOXYLIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1CEB 
_cell.length_a            64.3 
_cell.length_b            51.7 
_cell.length_c            46.8 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1CEB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 4 A CYS 1 1_555 A SG CYS 82 A CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf2 A SG CYS 25 A CYS 22 1_555 A SG CYS 65 A CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? 
disulf ? disulf3 A SG CYS 53 A CYS 50 1_555 A SG CYS 77 A CYS 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
disulf ? disulf4 B SG CYS 4 B CYS 1 1_555 B SG CYS 82 B CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? 
disulf ? disulf5 B SG CYS 25 B CYS 22 1_555 B SG CYS 65 B CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? 
disulf ? disulf6 B SG CYS 53 B CYS 50 1_555 B SG CYS 77 B CYS 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
#
_chem_comp.formula           'C8 H15 N O2' 
_chem_comp.formula_weight    157.21 
_chem_comp.id                AMH 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'TRANS-4-AMINOMETHYLCYCLOHEXANE-1-CARBOXYLIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 AMH sing 13 n n 
C1 C6 AMH sing 14 n n 
C1 C8 AMH sing 15 n n 
C1 H1 AMH sing 16 n n 
C2 C3 AMH sing 17 n n 
C2 H21 AMH sing 18 n n 
C2 H22 AMH sing 19 n n 
C3 C4 AMH sing 20 n n 
C3 H31 AMH sing 21 n n 
C3 H32 AMH sing 22 n n 
C4 C5 AMH sing 23 n n 
C4 C7 AMH sing 24 n n 
C4 H4 AMH sing 25 n n 
C5 C6 AMH sing 26 n n 
C5 H51 AMH sing 27 n n 
C5 H52 AMH sing 28 n n 
C6 H61 AMH sing 29 n n 
C6 H62 AMH sing 30 n n 
C7 N AMH sing 31 n n 
C7 H71 AMH sing 32 n n 
C7 H72 AMH sing 33 n n 
C8 O1 AMH doub 34 n n 
C8 O2 AMH sing 35 n n 
N HN1 AMH sing 36 n n 
N HN2 AMH sing 37 n n 
O2 HO2 AMH sing 38 n n 
#
_atom_sites.entry_id                     1CEB 
_atom_sites.fract_transf_matrix[1][1]    0.015552 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019342 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.021368 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 AMH A 1 90 90 AMH AMH . 
D 2 AMH B 1 90 90 AMH AMH . 
E 3 HOH A 1 201 201 HOH HOH . 
E 3 HOH A 2 202 202 HOH HOH . 
E 3 HOH A 3 203 203 HOH HOH . 
E 3 HOH A 4 204 204 HOH HOH . 
E 3 HOH A 5 206 206 HOH HOH . 
E 3 HOH A 6 207 207 HOH HOH . 
E 3 HOH A 7 208 208 HOH HOH . 
E 3 HOH A 8 212 212 HOH HOH . 
E 3 HOH A 9 213 213 HOH HOH . 
E 3 HOH A 10 214 214 HOH HOH . 
E 3 HOH A 11 215 215 HOH HOH . 
E 3 HOH A 12 216 216 HOH HOH . 
E 3 HOH A 13 217 217 HOH HOH . 
E 3 HOH A 14 218 218 HOH HOH . 
E 3 HOH A 15 219 219 HOH HOH . 
E 3 HOH A 16 232 232 HOH HOH . 
E 3 HOH A 17 234 234 HOH HOH . 
E 3 HOH A 18 237 237 HOH HOH . 
E 3 HOH A 19 241 241 HOH HOH . 
E 3 HOH A 20 242 242 HOH HOH . 
E 3 HOH A 21 243 243 HOH HOH . 
E 3 HOH A 22 245 245 HOH HOH . 
E 3 HOH A 23 246 246 HOH HOH . 
E 3 HOH A 24 249 249 HOH HOH . 
E 3 HOH A 25 252 252 HOH HOH . 
E 3 HOH A 26 254 254 HOH HOH . 
E 3 HOH A 27 257 257 HOH HOH . 
E 3 HOH A 28 258 258 HOH HOH . 
E 3 HOH A 29 259 259 HOH HOH . 
E 3 HOH A 30 260 260 HOH HOH . 
E 3 HOH A 31 263 263 HOH HOH . 
E 3 HOH A 32 264 264 HOH HOH . 
E 3 HOH A 33 265 265 HOH HOH . 
E 3 HOH A 34 266 266 HOH HOH . 
E 3 HOH A 35 271 271 HOH HOH . 
E 3 HOH A 36 273 273 HOH HOH . 
E 3 HOH A 37 277 277 HOH HOH . 
E 3 HOH A 38 280 280 HOH HOH . 
E 3 HOH A 39 301 301 HOH HOH . 
E 3 HOH A 40 309 309 HOH HOH . 
E 3 HOH A 41 317 317 HOH HOH . 
E 3 HOH A 42 318 318 HOH HOH . 
E 3 HOH A 43 326 326 HOH HOH . 
E 3 HOH A 44 329 329 HOH HOH . 
E 3 HOH A 45 331 331 HOH HOH . 
E 3 HOH A 46 334 334 HOH HOH . 
E 3 HOH A 47 335 335 HOH HOH . 
E 3 HOH A 48 341 341 HOH HOH . 
E 3 HOH A 49 347 347 HOH HOH . 
E 3 HOH A 50 349 349 HOH HOH . 
E 3 HOH A 51 351 351 HOH HOH . 
E 3 HOH A 52 357 357 HOH HOH . 
E 3 HOH A 53 366 366 HOH HOH . 
E 3 HOH A 54 367 367 HOH HOH . 
E 3 HOH A 55 368 368 HOH HOH . 
E 3 HOH A 56 369 369 HOH HOH . 
E 3 HOH A 57 372 372 HOH HOH . 
E 3 HOH A 58 376 376 HOH HOH . 
E 3 HOH A 59 386 386 HOH HOH . 
E 3 HOH A 60 388 388 HOH HOH . 
E 3 HOH A 61 389 389 HOH HOH . 
E 3 HOH A 62 393 393 HOH HOH . 
E 3 HOH A 63 396 396 HOH HOH . 
E 3 HOH A 64 397 397 HOH HOH . 
E 3 HOH A 65 402 402 HOH HOH . 
E 3 HOH A 66 403 403 HOH HOH . 
E 3 HOH A 67 405 405 HOH HOH . 
E 3 HOH A 68 406 406 HOH HOH . 
E 3 HOH A 69 408 408 HOH HOH . 
E 3 HOH A 70 413 413 HOH HOH . 
E 3 HOH A 71 417 417 HOH HOH . 
E 3 HOH A 72 428 428 HOH HOH . 
E 3 HOH A 73 430 430 HOH HOH . 
E 3 HOH A 74 431 431 HOH HOH . 
E 3 HOH A 75 432 432 HOH HOH . 
E 3 HOH A 76 433 433 HOH HOH . 
E 3 HOH A 77 435 435 HOH HOH . 
E 3 HOH A 78 436 436 HOH HOH . 
E 3 HOH A 79 437 437 HOH HOH . 
E 3 HOH A 80 438 438 HOH HOH . 
E 3 HOH A 81 440 440 HOH HOH . 
F 3 HOH B 1 209 209 HOH HOH . 
F 3 HOH B 2 221 221 HOH HOH . 
F 3 HOH B 3 223 223 HOH HOH . 
F 3 HOH B 4 224 224 HOH HOH . 
F 3 HOH B 5 225 225 HOH HOH . 
F 3 HOH B 6 230 230 HOH HOH . 
F 3 HOH B 7 231 231 HOH HOH . 
F 3 HOH B 8 233 233 HOH HOH . 
F 3 HOH B 9 235 235 HOH HOH . 
F 3 HOH B 10 236 236 HOH HOH . 
F 3 HOH B 11 238 238 HOH HOH . 
F 3 HOH B 12 239 239 HOH HOH . 
F 3 HOH B 13 247 247 HOH HOH . 
F 3 HOH B 14 248 248 HOH HOH . 
F 3 HOH B 15 250 250 HOH HOH . 
F 3 HOH B 16 251 251 HOH HOH . 
F 3 HOH B 17 253 253 HOH HOH . 
F 3 HOH B 18 267 267 HOH HOH . 
F 3 HOH B 19 268 268 HOH HOH . 
F 3 HOH B 20 269 269 HOH HOH . 
F 3 HOH B 21 270 270 HOH HOH . 
F 3 HOH B 22 272 272 HOH HOH . 
F 3 HOH B 23 278 278 HOH HOH . 
F 3 HOH B 24 304 304 HOH HOH . 
F 3 HOH B 25 305 305 HOH HOH . 
F 3 HOH B 26 306 306 HOH HOH . 
F 3 HOH B 27 307 307 HOH HOH . 
F 3 HOH B 28 310 310 HOH HOH . 
F 3 HOH B 29 311 311 HOH HOH . 
F 3 HOH B 30 313 313 HOH HOH . 
F 3 HOH B 31 315 315 HOH HOH . 
F 3 HOH B 32 319 319 HOH HOH . 
F 3 HOH B 33 320 320 HOH HOH . 
F 3 HOH B 34 322 322 HOH HOH . 
F 3 HOH B 35 324 324 HOH HOH . 
F 3 HOH B 36 328 328 HOH HOH . 
F 3 HOH B 37 333 333 HOH HOH . 
F 3 HOH B 38 336 336 HOH HOH . 
F 3 HOH B 39 338 338 HOH HOH . 
F 3 HOH B 40 340 340 HOH HOH . 
F 3 HOH B 41 343 343 HOH HOH . 
F 3 HOH B 42 345 345 HOH HOH . 
F 3 HOH B 43 346 346 HOH HOH . 
F 3 HOH B 44 353 353 HOH HOH . 
F 3 HOH B 45 355 355 HOH HOH . 
F 3 HOH B 46 360 360 HOH HOH . 
F 3 HOH B 47 362 362 HOH HOH . 
F 3 HOH B 48 363 363 HOH HOH . 
F 3 HOH B 49 364 364 HOH HOH . 
F 3 HOH B 50 365 365 HOH HOH . 
F 3 HOH B 51 374 374 HOH HOH . 
F 3 HOH B 52 375 375 HOH HOH . 
F 3 HOH B 53 377 377 HOH HOH . 
F 3 HOH B 54 379 379 HOH HOH . 
F 3 HOH B 55 380 380 HOH HOH . 
F 3 HOH B 56 381 381 HOH HOH . 
F 3 HOH B 57 384 384 HOH HOH . 
F 3 HOH B 58 387 387 HOH HOH . 
F 3 HOH B 59 390 390 HOH HOH . 
F 3 HOH B 60 392 392 HOH HOH . 
F 3 HOH B 61 410 410 HOH HOH . 
F 3 HOH B 62 412 412 HOH HOH . 
F 3 HOH B 63 415 415 HOH HOH . 
F 3 HOH B 64 416 416 HOH HOH . 
F 3 HOH B 65 418 418 HOH HOH . 
F 3 HOH B 66 421 421 HOH HOH . 
F 3 HOH B 67 423 423 HOH HOH . 
F 3 HOH B 68 439 439 HOH HOH . 
F 3 HOH B 69 441 441 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 AMH . . . D 2 21.541 -22.332 40.009 1 18.33 ? C1 AMH 90 B 1 
HETATM 2 C C2 AMH . . . D 2 21.724 -23.662 40.734 1 17.38 ? C2 AMH 90 B 1 
HETATM 3 C C3 AMH . . . D 2 20.408 -24.221 41.019 1 17.14 ? C3 AMH 90 B 1 
HETATM 4 C C4 AMH . . . D 2 19.617 -24.384 39.785 1 18.01 ? C4 AMH 90 B 1 
HETATM 5 C C5 AMH . . . D 2 19.43 -23.031 38.99 1 17.95 ? C5 AMH 90 B 1 
HETATM 6 C C6 AMH . . . D 2 20.82 -22.441 38.677 1 18.07 ? C6 AMH 90 B 1 
HETATM 7 C C7 AMH . . . D 2 18.125 -24.923 40.249 1 17.91 ? C7 AMH 90 B 1 
HETATM 8 C C8 AMH . . . D 2 22.846 -21.535 40.041 1 18.8 ? C8 AMH 90 B 1 
HETATM 9 N N AMH . . . D 2 17.635 -25.166 38.902 1 18.57 ? N AMH 90 B 1 
HETATM 10 O O1 AMH . . . D 2 23.961 -21.813 39.572 1 19.61 ? O1 AMH 90 B 1 
HETATM 11 O O2 AMH . . . D 2 22.881 -20.399 40.628 1 21.5 ? O2 AMH 90 B 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           274 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           11 
#