data_1CHI # _model_server_result.job_id dEkRI1jRqqBhlWFq4zunRg _model_server_result.datetime_utc '2024-10-14 07:24:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1chi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":104}' # _entry.id 1CHI # _exptl.entry_id 1CHI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 618.503 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEME C' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1CHI _cell.length_a 36.52 _cell.length_b 36.52 _cell.length_c 136.74 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CHI _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 19 A CYS 14 1_555 C CAB HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.828 ? covale ? covale2 A SG CYS 22 A CYS 17 1_555 C CAC HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.83 ? covale ? covale3 A C PRO 76 A PRO 71 1_555 A N M3L 77 A M3L 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.312 ? covale ? covale4 A C M3L 77 A M3L 72 1_555 A N LYS 78 A LYS 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.314 ? metalc ? metalc1 A NE2 HIS 23 A HIS 18 1_555 C FE HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc2 A SD MET 85 A MET 80 1_555 C FE HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? # _chem_comp.formula 'C34 H34 Fe N4 O4' _chem_comp.formula_weight 618.503 _chem_comp.id HEC _chem_comp.mon_nstd_flag . _chem_comp.name 'HEME C' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1CHI _atom_sites.fract_transf_matrix[1][1] 0.027382 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.027382 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007313 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 117 117 SO4 SO4 . C 3 HEC A 1 104 104 HEC HEM . D 4 HOH A 1 107 107 HOH HOH . D 4 HOH A 2 109 109 HOH HOH . D 4 HOH A 3 110 110 HOH HOH . D 4 HOH A 4 112 112 HOH HOH . D 4 HOH A 5 113 113 HOH HOH . D 4 HOH A 6 118 118 HOH HOH . D 4 HOH A 7 119 119 HOH HOH . D 4 HOH A 8 121 121 HOH HOH . D 4 HOH A 9 122 122 HOH HOH . D 4 HOH A 10 127 127 HOH HOH . D 4 HOH A 11 128 128 HOH HOH . D 4 HOH A 12 129 129 HOH HOH . D 4 HOH A 13 133 133 HOH HOH . D 4 HOH A 14 135 135 HOH HOH . D 4 HOH A 15 136 136 HOH HOH . D 4 HOH A 16 138 138 HOH HOH . D 4 HOH A 17 141 141 HOH HOH . D 4 HOH A 18 142 142 HOH HOH . D 4 HOH A 19 144 144 HOH HOH . D 4 HOH A 20 145 145 HOH HOH . D 4 HOH A 21 148 148 HOH HOH . D 4 HOH A 22 149 149 HOH HOH . D 4 HOH A 23 150 150 HOH HOH . D 4 HOH A 24 151 151 HOH HOH . D 4 HOH A 25 152 152 HOH HOH . D 4 HOH A 26 153 153 HOH HOH . D 4 HOH A 27 154 154 HOH HOH . D 4 HOH A 28 156 156 HOH HOH . D 4 HOH A 29 158 158 HOH HOH . D 4 HOH A 30 160 160 HOH HOH . D 4 HOH A 31 163 163 HOH HOH . D 4 HOH A 32 166 166 HOH HOH . D 4 HOH A 33 167 167 HOH HOH . D 4 HOH A 34 168 168 HOH HOH . D 4 HOH A 35 174 174 HOH HOH . D 4 HOH A 36 175 175 HOH HOH . D 4 HOH A 37 183 183 HOH HOH . D 4 HOH A 38 184 184 HOH HOH . D 4 HOH A 39 186 186 HOH HOH . D 4 HOH A 40 188 188 HOH HOH . D 4 HOH A 41 189 189 HOH HOH . D 4 HOH A 42 191 191 HOH HOH . D 4 HOH A 43 193 193 HOH HOH . D 4 HOH A 44 194 194 HOH HOH . D 4 HOH A 45 196 196 HOH HOH . D 4 HOH A 46 197 197 HOH HOH . D 4 HOH A 47 204 204 HOH HOH . D 4 HOH A 48 205 205 HOH HOH . D 4 HOH A 49 207 207 HOH HOH . D 4 HOH A 50 210 210 HOH HOH . D 4 HOH A 51 214 214 HOH HOH . D 4 HOH A 52 215 215 HOH HOH . D 4 HOH A 53 217 217 HOH HOH . D 4 HOH A 54 218 218 HOH HOH . D 4 HOH A 55 220 220 HOH HOH . D 4 HOH A 56 223 223 HOH HOH . D 4 HOH A 57 224 224 HOH HOH . D 4 HOH A 58 230 230 HOH HOH . D 4 HOH A 59 235 235 HOH HOH . D 4 HOH A 60 241 241 HOH HOH . D 4 HOH A 61 242 242 HOH HOH . D 4 HOH A 62 243 243 HOH HOH . D 4 HOH A 63 244 244 HOH HOH . D 4 HOH A 64 245 245 HOH HOH . D 4 HOH A 65 246 246 HOH HOH . D 4 HOH A 66 248 248 HOH HOH . D 4 HOH A 67 253 253 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE HEC . . . C 3 2.766 21.011 13.112 1 5.36 ? FE HEC 104 A 1 HETATM 2 C CHA HEC . . . C 3 5.125 18.726 14.173 1 7.65 ? CHA HEC 104 A 1 HETATM 3 C CHB HEC . . . C 3 3.909 20.786 9.944 1 6.08 ? CHB HEC 104 A 1 HETATM 4 C CHC HEC . . . C 3 0.066 22.822 12.054 1 5.29 ? CHC HEC 104 A 1 HETATM 5 C CHD HEC . . . C 3 2.013 21.768 16.315 1 8.21 ? CHD HEC 104 A 1 HETATM 6 N NA HEC . . . C 3 4.282 20.021 12.239 1 6.84 ? NA HEC 104 A 1 HETATM 7 C C1A HEC . . . C 3 5.03 19.017 12.821 1 7.52 ? C1A HEC 104 A 1 HETATM 8 C C2A HEC . . . C 3 5.759 18.323 11.766 1 8.24 ? C2A HEC 104 A 1 HETATM 9 C C3A HEC . . . C 3 5.478 18.904 10.589 1 7.13 ? C3A HEC 104 A 1 HETATM 10 C C4A HEC . . . C 3 4.516 19.956 10.857 1 6.81 ? C4A HEC 104 A 1 HETATM 11 C CMA HEC . . . C 3 5.93 18.505 9.189 1 6.36 ? CMA HEC 104 A 1 HETATM 12 C CAA HEC . . . C 3 6.754 17.198 12.106 1 6.92 ? CAA HEC 104 A 1 HETATM 13 C CBA HEC . . . C 3 8.058 17.822 12.729 1 6.53 ? CBA HEC 104 A 1 HETATM 14 C CGA HEC . . . C 3 9.303 16.991 12.439 1 6.82 ? CGA HEC 104 A 1 HETATM 15 O O1A HEC . . . C 3 10.371 17.707 12.305 1 10.77 ? O1A HEC 104 A 1 HETATM 16 O O2A HEC . . . C 3 9.248 15.737 12.406 1 4.35 ? O2A HEC 104 A 1 HETATM 17 N NB HEC . . . C 3 2.058 21.579 11.332 1 4.97 ? NB HEC 104 A 1 HETATM 18 C C1B HEC . . . C 3 2.783 21.536 10.124 1 5.82 ? C1B HEC 104 A 1 HETATM 19 C C2B HEC . . . C 3 2.035 22.314 9.126 1 4.95 ? C2B HEC 104 A 1 HETATM 20 C C3B HEC . . . C 3 1.002 22.856 9.738 1 4 ? C3B HEC 104 A 1 HETATM 21 C C4B HEC . . . C 3 0.994 22.409 11.123 1 4 ? C4B HEC 104 A 1 HETATM 22 C CMB HEC . . . C 3 2.533 22.436 7.672 1 8.62 ? CMB HEC 104 A 1 HETATM 23 C CAB HEC . . . C 3 -0.156 23.72 9.168 1 4 ? CAB HEC 104 A 1 HETATM 24 C CBB HEC . . . C 3 -1.015 22.811 8.234 1 5.06 ? CBB HEC 104 A 1 HETATM 25 N NC HEC . . . C 3 1.321 22.087 14.025 1 6.48 ? NC HEC 104 A 1 HETATM 26 C C1C HEC . . . C 3 0.325 22.83 13.398 1 8.11 ? C1C HEC 104 A 1 HETATM 27 C C2C HEC . . . C 3 -0.402 23.605 14.39 1 8.4 ? C2C HEC 104 A 1 HETATM 28 C C3C HEC . . . C 3 0.116 23.303 15.571 1 8.65 ? C3C HEC 104 A 1 HETATM 29 C C4C HEC . . . C 3 1.235 22.394 15.35 1 8.67 ? C4C HEC 104 A 1 HETATM 30 C CMC HEC . . . C 3 -1.568 24.555 14.015 1 9.05 ? CMC HEC 104 A 1 HETATM 31 C CAC HEC . . . C 3 -0.244 23.868 16.973 1 7.83 ? CAC HEC 104 A 1 HETATM 32 C CBC HEC . . . C 3 -1.745 24.034 17.271 1 8.03 ? CBC HEC 104 A 1 HETATM 33 N ND HEC . . . C 3 3.443 20.379 14.898 1 6.26 ? ND HEC 104 A 1 HETATM 34 C C1D HEC . . . C 3 2.949 20.779 16.124 1 8.35 ? C1D HEC 104 A 1 HETATM 35 C C2D HEC . . . C 3 3.601 19.993 17.177 1 9.07 ? C2D HEC 104 A 1 HETATM 36 C C3D HEC . . . C 3 4.482 19.188 16.578 1 8.34 ? C3D HEC 104 A 1 HETATM 37 C C4D HEC . . . C 3 4.344 19.37 15.126 1 8.27 ? C4D HEC 104 A 1 HETATM 38 C CMD HEC . . . C 3 3.314 20.127 18.7 1 9.96 ? CMD HEC 104 A 1 HETATM 39 C CAD HEC . . . C 3 5.388 18.125 17.217 1 9.74 ? CAD HEC 104 A 1 HETATM 40 C CBD HEC . . . C 3 4.846 16.669 17.171 1 9.6 ? CBD HEC 104 A 1 HETATM 41 C CGD HEC . . . C 3 5.372 15.752 18.258 1 10.69 ? CGD HEC 104 A 1 HETATM 42 O O1D HEC . . . C 3 6.428 16.051 18.88 1 9.48 ? O1D HEC 104 A 1 HETATM 43 O O2D HEC . . . C 3 4.655 14.736 18.418 1 11.32 ? O2D HEC 104 A 1 # _model_server_stats.io_time_ms 72 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 43 #