data_1CIA # _model_server_result.job_id VGa4jHvC2GqzrWazjpivUw _model_server_result.datetime_utc '2024-10-19 03:55:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1cia # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":536}' # _entry.id 1CIA # _exptl.entry_id 1CIA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-MERCAPTOETHANOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1CIA _cell.length_a 107.64 _cell.length_b 107.64 _cell.length_c 124.13 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CIA _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA,PQS trimeric 3 author_and_software_defined_assembly 1 PISA hexameric 6 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1,2,3 A,B,C,D,E 2 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 5 'crystal symmetry operation' 5_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 6 'crystal symmetry operation' 6_555 -x,-x+y,-z -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 18 A GLU 23 1_555 B CO CO . A CO 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.882 ? metalc ? metalc2 A OE1 GLU 18 A GLU 23 1_555 B CO CO . A CO 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.709 ? metalc ? metalc3 A OE1 GLU 18 A GLU 23 5_555 B CO CO . A CO 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.709 ? metalc ? metalc4 A OE2 GLU 18 A GLU 23 5_555 B CO CO . A CO 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.882 ? metalc ? metalc5 A ND1 HIS 22 A HIS 27 1_555 B CO CO . A CO 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.983 ? metalc ? metalc6 A ND1 HIS 22 A HIS 27 5_555 B CO CO . A CO 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.983 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id BME _chem_comp.mon_nstd_flag . _chem_comp.name BETA-MERCAPTOETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BME sing 70 n n C1 O1 BME sing 71 n n C1 H11 BME sing 72 n n C1 H12 BME sing 73 n n C2 S2 BME sing 74 n n C2 H21 BME sing 75 n n C2 H22 BME sing 76 n n O1 HO1 BME sing 77 n n S2 HS2 BME sing 78 n n # _atom_sites.entry_id 1CIA _atom_sites.fract_transf_matrix[1][1] 0.00929 _atom_sites.fract_transf_matrix[1][2] 0.005364 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010727 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008056 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CO A 1 222 222 CO CO . C 2 CO A 1 223 223 CO CO . D 3 BME A 1 536 536 BME SEO . E 4 HOH A 1 224 224 HOH HOH . E 4 HOH A 2 225 225 HOH HOH . E 4 HOH A 3 226 226 HOH HOH . E 4 HOH A 4 227 227 HOH HOH . E 4 HOH A 5 228 228 HOH HOH . E 4 HOH A 6 229 229 HOH HOH . E 4 HOH A 7 230 230 HOH HOH . E 4 HOH A 8 231 231 HOH HOH . E 4 HOH A 9 232 232 HOH HOH . E 4 HOH A 10 233 233 HOH HOH . E 4 HOH A 11 234 234 HOH HOH . E 4 HOH A 12 235 235 HOH HOH . E 4 HOH A 13 236 236 HOH HOH . E 4 HOH A 14 237 237 HOH HOH . E 4 HOH A 15 238 238 HOH HOH . E 4 HOH A 16 239 239 HOH HOH . E 4 HOH A 17 240 240 HOH HOH . E 4 HOH A 18 241 241 HOH HOH . E 4 HOH A 19 242 242 HOH HOH . E 4 HOH A 20 243 243 HOH HOH . E 4 HOH A 21 244 244 HOH HOH . E 4 HOH A 22 245 245 HOH HOH . E 4 HOH A 23 246 246 HOH HOH . E 4 HOH A 24 247 247 HOH HOH . E 4 HOH A 25 248 248 HOH HOH . E 4 HOH A 26 249 249 HOH HOH . E 4 HOH A 27 250 250 HOH HOH . E 4 HOH A 28 251 251 HOH HOH . E 4 HOH A 29 252 252 HOH HOH . E 4 HOH A 30 253 253 HOH HOH . E 4 HOH A 31 254 254 HOH HOH . E 4 HOH A 32 255 255 HOH HOH . E 4 HOH A 33 256 256 HOH HOH . E 4 HOH A 34 257 257 HOH HOH . E 4 HOH A 35 258 258 HOH HOH . E 4 HOH A 36 259 259 HOH HOH . E 4 HOH A 37 260 260 HOH HOH . E 4 HOH A 38 262 262 HOH HOH . E 4 HOH A 39 263 263 HOH HOH . E 4 HOH A 40 264 264 HOH HOH . E 4 HOH A 41 267 267 HOH HOH . E 4 HOH A 42 268 268 HOH HOH . E 4 HOH A 43 269 269 HOH HOH . E 4 HOH A 44 270 270 HOH HOH . E 4 HOH A 45 272 272 HOH HOH . E 4 HOH A 46 273 273 HOH HOH . E 4 HOH A 47 275 275 HOH HOH . E 4 HOH A 48 277 277 HOH HOH . E 4 HOH A 49 278 278 HOH HOH . E 4 HOH A 50 279 279 HOH HOH . E 4 HOH A 51 281 281 HOH HOH . E 4 HOH A 52 284 284 HOH HOH . E 4 HOH A 53 285 285 HOH HOH . E 4 HOH A 54 286 286 HOH HOH . E 4 HOH A 55 287 287 HOH HOH . E 4 HOH A 56 288 288 HOH HOH . E 4 HOH A 57 289 289 HOH HOH . E 4 HOH A 58 292 292 HOH HOH . E 4 HOH A 59 293 293 HOH HOH . E 4 HOH A 60 294 294 HOH HOH . E 4 HOH A 61 295 295 HOH HOH . E 4 HOH A 62 297 297 HOH HOH . E 4 HOH A 63 298 298 HOH HOH . E 4 HOH A 64 299 299 HOH HOH . E 4 HOH A 65 301 301 HOH HOH . E 4 HOH A 66 305 305 HOH HOH . E 4 HOH A 67 307 307 HOH HOH . E 4 HOH A 68 309 309 HOH HOH . E 4 HOH A 69 310 310 HOH HOH . E 4 HOH A 70 311 311 HOH HOH . E 4 HOH A 71 312 312 HOH HOH . E 4 HOH A 72 313 313 HOH HOH . E 4 HOH A 73 314 314 HOH HOH . E 4 HOH A 74 315 315 HOH HOH . E 4 HOH A 75 318 318 HOH HOH . E 4 HOH A 76 322 322 HOH HOH . E 4 HOH A 77 323 323 HOH HOH . E 4 HOH A 78 329 329 HOH HOH . E 4 HOH A 79 330 330 HOH HOH . E 4 HOH A 80 335 335 HOH HOH . E 4 HOH A 81 336 336 HOH HOH . E 4 HOH A 82 337 337 HOH HOH . E 4 HOH A 83 338 338 HOH HOH . E 4 HOH A 84 340 340 HOH HOH . E 4 HOH A 85 341 341 HOH HOH . E 4 HOH A 86 342 342 HOH HOH . E 4 HOH A 87 343 343 HOH HOH . E 4 HOH A 88 344 344 HOH HOH . E 4 HOH A 89 346 346 HOH HOH . E 4 HOH A 90 347 347 HOH HOH . E 4 HOH A 91 348 348 HOH HOH . E 4 HOH A 92 349 349 HOH HOH . E 4 HOH A 93 351 351 HOH HOH . E 4 HOH A 94 353 353 HOH HOH . E 4 HOH A 95 354 354 HOH HOH . E 4 HOH A 96 359 359 HOH HOH . E 4 HOH A 97 369 369 HOH HOH . E 4 HOH A 98 374 374 HOH HOH . E 4 HOH A 99 375 375 HOH HOH . E 4 HOH A 100 376 376 HOH HOH . E 4 HOH A 101 379 379 HOH HOH . E 4 HOH A 102 380 380 HOH HOH . E 4 HOH A 103 384 384 HOH HOH . E 4 HOH A 104 388 388 HOH HOH . E 4 HOH A 105 389 389 HOH HOH . E 4 HOH A 106 396 396 HOH HOH . E 4 HOH A 107 397 397 HOH HOH . E 4 HOH A 108 399 399 HOH HOH . E 4 HOH A 109 405 405 HOH HOH . E 4 HOH A 110 413 413 HOH HOH . E 4 HOH A 111 418 418 HOH HOH . E 4 HOH A 112 421 421 HOH HOH . E 4 HOH A 113 422 422 HOH HOH . E 4 HOH A 114 424 424 HOH HOH . E 4 HOH A 115 437 437 HOH HOH . E 4 HOH A 116 444 444 HOH HOH . E 4 HOH A 117 473 473 HOH HOH . E 4 HOH A 118 477 477 HOH HOH . E 4 HOH A 119 495 495 HOH HOH . E 4 HOH A 120 531 531 HOH HOH . E 4 HOH A 121 532 532 HOH HOH . E 4 HOH A 122 533 533 HOH HOH . E 4 HOH A 123 534 534 HOH HOH . E 4 HOH A 124 535 535 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BME . . . D 3 0.622 16.211 13.576 1 71.3 ? C1 BME 536 A 1 HETATM 2 C C2 BME . . . D 3 -0.137 15.032 14.173 1 69.93 ? C2 BME 536 A 1 HETATM 3 O O1 BME . . . D 3 0.421 17.451 14.272 1 72.54 ? O1 BME 536 A 1 HETATM 4 S S2 BME . . . D 3 0.44 14.825 15.931 1 76.52 ? S2 BME 536 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #