data_1CIH # _model_server_result.job_id bsMMgpHYLxbps1cF_dVvJw _model_server_result.datetime_utc '2024-12-26 13:50:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1cih # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":104}' # _entry.id 1CIH # _exptl.entry_id 1CIH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 618.503 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEME C' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1CIH _cell.length_a 36.48 _cell.length_b 36.48 _cell.length_c 137.28 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CIH _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 19 A CYS 14 1_555 C CAB HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.787 ? covale ? covale2 A SG CYS 22 A CYS 17 1_555 C CAC HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.808 ? covale ? covale3 A C PRO 76 A PRO 71 1_555 A N M3L 77 A M3L 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.314 ? covale ? covale4 A C M3L 77 A M3L 72 1_555 A N LYS 78 A LYS 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? metalc ? metalc1 A NE2 HIS 23 A HIS 18 1_555 C FE HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.934 ? metalc ? metalc2 A SD MET 85 A MET 80 1_555 C FE HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? # _chem_comp.formula 'C34 H34 Fe N4 O4' _chem_comp.formula_weight 618.503 _chem_comp.id HEC _chem_comp.mon_nstd_flag . _chem_comp.name 'HEME C' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1CIH _atom_sites.fract_transf_matrix[1][1] 0.027412 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.027412 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007284 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 117 117 SO4 SO4 . C 3 HEC A 1 104 104 HEC HEM . D 4 HOH A 1 106 106 HOH HOH . D 4 HOH A 2 108 108 HOH HOH . D 4 HOH A 3 110 110 HOH HOH . D 4 HOH A 4 112 112 HOH HOH . D 4 HOH A 5 113 113 HOH HOH . D 4 HOH A 6 118 118 HOH HOH . D 4 HOH A 7 119 119 HOH HOH . D 4 HOH A 8 121 121 HOH HOH . D 4 HOH A 9 122 122 HOH HOH . D 4 HOH A 10 123 123 HOH HOH . D 4 HOH A 11 125 125 HOH HOH . D 4 HOH A 12 126 126 HOH HOH . D 4 HOH A 13 128 128 HOH HOH . D 4 HOH A 14 129 129 HOH HOH . D 4 HOH A 15 130 130 HOH HOH . D 4 HOH A 16 133 133 HOH HOH . D 4 HOH A 17 135 135 HOH HOH . D 4 HOH A 18 136 136 HOH HOH . D 4 HOH A 19 137 137 HOH HOH . D 4 HOH A 20 139 139 HOH HOH . D 4 HOH A 21 140 140 HOH HOH . D 4 HOH A 22 141 141 HOH HOH . D 4 HOH A 23 142 142 HOH HOH . D 4 HOH A 24 148 148 HOH HOH . D 4 HOH A 25 151 151 HOH HOH . D 4 HOH A 26 153 153 HOH HOH . D 4 HOH A 27 154 154 HOH HOH . D 4 HOH A 28 156 156 HOH HOH . D 4 HOH A 29 158 158 HOH HOH . D 4 HOH A 30 160 160 HOH HOH . D 4 HOH A 31 163 163 HOH HOH . D 4 HOH A 32 167 167 HOH HOH . D 4 HOH A 33 168 168 HOH HOH . D 4 HOH A 34 172 172 HOH HOH . D 4 HOH A 35 173 173 HOH HOH . D 4 HOH A 36 175 175 HOH HOH . D 4 HOH A 37 176 176 HOH HOH . D 4 HOH A 38 181 181 HOH HOH . D 4 HOH A 39 183 183 HOH HOH . D 4 HOH A 40 185 185 HOH HOH . D 4 HOH A 41 191 191 HOH HOH . D 4 HOH A 42 194 194 HOH HOH . D 4 HOH A 43 195 195 HOH HOH . D 4 HOH A 44 196 196 HOH HOH . D 4 HOH A 45 197 197 HOH HOH . D 4 HOH A 46 198 198 HOH HOH . D 4 HOH A 47 200 200 HOH HOH . D 4 HOH A 48 201 201 HOH HOH . D 4 HOH A 49 204 204 HOH HOH . D 4 HOH A 50 208 208 HOH HOH . D 4 HOH A 51 209 209 HOH HOH . D 4 HOH A 52 210 210 HOH HOH . D 4 HOH A 53 215 215 HOH HOH . D 4 HOH A 54 216 216 HOH HOH . D 4 HOH A 55 217 217 HOH HOH . D 4 HOH A 56 218 218 HOH HOH . D 4 HOH A 57 221 221 HOH HOH . D 4 HOH A 58 231 231 HOH HOH . D 4 HOH A 59 236 236 HOH HOH . D 4 HOH A 60 243 243 HOH HOH . D 4 HOH A 61 251 251 HOH HOH . D 4 HOH A 62 252 252 HOH HOH . D 4 HOH A 63 255 255 HOH HOH . D 4 HOH A 64 262 262 HOH HOH . D 4 HOH A 65 263 263 HOH HOH . D 4 HOH A 66 264 264 HOH HOH . D 4 HOH A 67 265 265 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE HEC . . . C 3 2.982 21.075 13.049 1 14.4 ? FE HEC 104 A 1 HETATM 2 C CHA HEC . . . C 3 5.265 18.835 14.164 1 14.62 ? CHA HEC 104 A 1 HETATM 3 C CHB HEC . . . C 3 4.157 20.787 9.9 1 13.97 ? CHB HEC 104 A 1 HETATM 4 C CHC HEC . . . C 3 0.372 22.965 11.923 1 10.75 ? CHC HEC 104 A 1 HETATM 5 C CHD HEC . . . C 3 2.131 21.828 16.27 1 11.98 ? CHD HEC 104 A 1 HETATM 6 N NA HEC . . . C 3 4.452 20.038 12.195 1 14.1 ? NA HEC 104 A 1 HETATM 7 C C1A HEC . . . C 3 5.297 19.102 12.77 1 15.13 ? C1A HEC 104 A 1 HETATM 8 C C2A HEC . . . C 3 6.05 18.422 11.776 1 15.5 ? C2A HEC 104 A 1 HETATM 9 C C3A HEC . . . C 3 5.779 18.967 10.595 1 15.58 ? C3A HEC 104 A 1 HETATM 10 C C4A HEC . . . C 3 4.751 19.966 10.82 1 14.22 ? C4A HEC 104 A 1 HETATM 11 C CMA HEC . . . C 3 6.327 18.61 9.198 1 14.47 ? CMA HEC 104 A 1 HETATM 12 C CAA HEC . . . C 3 7.108 17.296 12.067 1 16.87 ? CAA HEC 104 A 1 HETATM 13 C CBA HEC . . . C 3 8.445 18.02 12.476 1 16.77 ? CBA HEC 104 A 1 HETATM 14 C CGA HEC . . . C 3 9.712 17.186 12.537 1 16.7 ? CGA HEC 104 A 1 HETATM 15 O O1A HEC . . . C 3 10.708 17.861 12.883 1 18.02 ? O1A HEC 104 A 1 HETATM 16 O O2A HEC . . . C 3 9.654 15.978 12.287 1 17.29 ? O2A HEC 104 A 1 HETATM 17 N NB HEC . . . C 3 2.346 21.783 11.246 1 11.42 ? NB HEC 104 A 1 HETATM 18 C C1B HEC . . . C 3 3.053 21.579 10.088 1 13.17 ? C1B HEC 104 A 1 HETATM 19 C C2B HEC . . . C 3 2.376 22.345 9.027 1 12.39 ? C2B HEC 104 A 1 HETATM 20 C C3B HEC . . . C 3 1.3 22.939 9.568 1 10.66 ? C3B HEC 104 A 1 HETATM 21 C C4B HEC . . . C 3 1.294 22.593 11.004 1 10.03 ? C4B HEC 104 A 1 HETATM 22 C CMB HEC . . . C 3 2.889 22.347 7.57 1 13.35 ? CMB HEC 104 A 1 HETATM 23 C CAB HEC . . . C 3 0.238 23.787 8.904 1 11.31 ? CAB HEC 104 A 1 HETATM 24 C CBB HEC . . . C 3 -0.603 23.033 7.844 1 13.91 ? CBB HEC 104 A 1 HETATM 25 N NC HEC . . . C 3 1.501 22.149 13.935 1 11.89 ? NC HEC 104 A 1 HETATM 26 C C1C HEC . . . C 3 0.545 22.914 13.33 1 10.96 ? C1C HEC 104 A 1 HETATM 27 C C2C HEC . . . C 3 -0.262 23.633 14.291 1 12.3 ? C2C HEC 104 A 1 HETATM 28 C C3C HEC . . . C 3 0.225 23.3 15.502 1 12.17 ? C3C HEC 104 A 1 HETATM 29 C C4C HEC . . . C 3 1.353 22.396 15.293 1 11.62 ? C4C HEC 104 A 1 HETATM 30 C CMC HEC . . . C 3 -1.414 24.609 14.036 1 12.24 ? CMC HEC 104 A 1 HETATM 31 C CAC HEC . . . C 3 -0.148 23.882 16.885 1 12.51 ? CAC HEC 104 A 1 HETATM 32 C CBC HEC . . . C 3 -1.674 24.015 17.213 1 12.43 ? CBC HEC 104 A 1 HETATM 33 N ND HEC . . . C 3 3.622 20.494 14.899 1 13.01 ? ND HEC 104 A 1 HETATM 34 C C1D HEC . . . C 3 3.085 20.877 16.095 1 12.03 ? C1D HEC 104 A 1 HETATM 35 C C2D HEC . . . C 3 3.688 20.052 17.141 1 14.18 ? C2D HEC 104 A 1 HETATM 36 C C3D HEC . . . C 3 4.565 19.233 16.558 1 13.59 ? C3D HEC 104 A 1 HETATM 37 C C4D HEC . . . C 3 4.477 19.446 15.105 1 12.41 ? C4D HEC 104 A 1 HETATM 38 C CMD HEC . . . C 3 3.307 20.156 18.647 1 14.2 ? CMD HEC 104 A 1 HETATM 39 C CAD HEC . . . C 3 5.424 18.124 17.191 1 13.06 ? CAD HEC 104 A 1 HETATM 40 C CBD HEC . . . C 3 4.742 16.752 17.17 1 14.83 ? CBD HEC 104 A 1 HETATM 41 C CGD HEC . . . C 3 5.219 15.703 18.131 1 15.68 ? CGD HEC 104 A 1 HETATM 42 O O1D HEC . . . C 3 6.299 15.905 18.767 1 15.94 ? O1D HEC 104 A 1 HETATM 43 O O2D HEC . . . C 3 4.537 14.613 18.159 1 16.06 ? O2D HEC 104 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 43 #