data_1CIT # _model_server_result.job_id qOEJPZfVrDjPaNnrVR9mSA _model_server_result.datetime_utc '2024-11-05 01:27:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1cit # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":398}' # _entry.id 1CIT # _exptl.entry_id 1CIT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.13 _cell.angle_gamma 90 _cell.entry_id 1CIT _cell.length_a 53.42 _cell.length_b 34.24 _cell.length_c 56.26 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CIT _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C SG CYS 3 A CYS 232 1_555 D ZN ZN . A ZN 398 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.713 ? metalc ? metalc2 C SG CYS 6 A CYS 235 1_555 D ZN ZN . A ZN 398 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.645 ? metalc ? metalc3 C SG CYS 20 A CYS 249 1_555 D ZN ZN . A ZN 398 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.629 ? metalc ? metalc4 C SG CYS 23 A CYS 252 1_555 D ZN ZN . A ZN 398 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? metalc ? metalc5 C SG CYS 39 A CYS 268 1_555 E ZN ZN . A ZN 399 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.571 ? metalc ? metalc6 C SG CYS 45 A CYS 274 1_555 E ZN ZN . A ZN 399 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.562 ? metalc ? metalc7 C SG CYS 55 A CYS 284 1_555 E ZN ZN . A ZN 399 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.609 ? metalc ? metalc8 C SG CYS 58 A CYS 287 1_555 E ZN ZN . A ZN 399 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.564 ? hydrog WATSON-CRICK hydrog1 A N3 DC 1 B DC 402 1_555 B N1 DG 16 C DG 434 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N4 DC 1 B DC 402 1_555 B O6 DG 16 C DG 434 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O2 DC 1 B DC 402 1_555 B N2 DG 16 C DG 434 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N3 DC 2 B DC 403 1_555 B N1 DG 15 C DG 433 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N4 DC 2 B DC 403 1_555 B O6 DG 15 C DG 433 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O2 DC 2 B DC 403 1_555 B N2 DG 15 C DG 433 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N1 DG 3 B DG 404 1_555 B N3 DC 14 C DC 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N2 DG 3 B DG 404 1_555 B O2 DC 14 C DC 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A O6 DG 3 B DG 404 1_555 B N4 DC 14 C DC 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N1 DA 4 B DA 405 1_555 B N3 DT 13 C DT 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N6 DA 4 B DA 405 1_555 B O4 DT 13 C DT 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N1 DA 5 B DA 406 1_555 B N3 DT 12 C DT 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A N6 DA 5 B DA 406 1_555 B O4 DT 12 C DT 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A N1 DA 6 B DA 407 1_555 B N3 DT 11 C DT 429 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A N6 DA 6 B DA 407 1_555 B O4 DT 11 C DT 429 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A N1 DA 7 B DA 408 1_555 B N3 DT 10 C DT 428 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A N6 DA 7 B DA 408 1_555 B O4 DT 10 C DT 428 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A N1 DG 8 B DG 409 1_555 B N3 DC 9 C DC 427 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A N2 DG 8 B DG 409 1_555 B O2 DC 9 C DC 427 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 A O6 DG 8 B DG 409 1_555 B N4 DC 9 C DC 427 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 A N1 DG 9 B DG 410 1_555 B N3 DC 8 C DC 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 A N2 DG 9 B DG 410 1_555 B O2 DC 8 C DC 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 A O6 DG 9 B DG 410 1_555 B N4 DC 8 C DC 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DT-DA PAIR' hydrog24 A N3 DT 10 B DT 411 1_555 B N1 DA 7 C DA 425 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DC-DG PAIR' hydrog25 A O2 DC 11 B DC 412 1_555 B N2 DG 6 C DG 424 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DA-DT PAIR' hydrog26 A N1 DA 12 B DA 413 1_555 B N3 DT 5 C DT 423 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 A N3 DT 13 B DT 414 1_555 B N1 DA 4 C DA 422 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 A O4 DT 13 B DT 414 1_555 B N6 DA 4 C DA 422 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog29 A N1 DG 14 B DG 415 1_555 B N3 DC 3 C DC 421 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog30 A N2 DG 14 B DG 415 1_555 B O2 DC 3 C DC 421 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog31 A O6 DG 14 B DG 415 1_555 B N4 DC 3 C DC 421 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DC-DG PAIR' hydrog32 A N4 DC 15 B DC 416 1_555 B O6 DG 2 C DG 420 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog33 A N1 DG 16 B DG 417 1_555 B N3 DC 1 C DC 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog34 A N2 DG 16 B DG 417 1_555 B O2 DC 1 C DC 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog35 A O6 DG 16 B DG 417 1_555 B N4 DC 1 C DC 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1CIT _atom_sites.fract_transf_matrix[1][1] 0.01872 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006493 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.029206 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018814 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN A 1 398 398 ZN ZN . E 4 ZN A 1 399 399 ZN ZN . F 5 HOH B 1 8 8 HOH WAT . F 5 HOH B 2 13 13 HOH WAT . F 5 HOH B 3 15 15 HOH WAT . F 5 HOH B 4 16 16 HOH WAT . F 5 HOH B 5 18 18 HOH WAT . F 5 HOH B 6 19 19 HOH WAT . F 5 HOH B 7 26 26 HOH WAT . F 5 HOH B 8 29 29 HOH WAT . F 5 HOH B 9 33 33 HOH WAT . F 5 HOH B 10 38 38 HOH WAT . G 5 HOH C 1 12 12 HOH WAT . G 5 HOH C 2 17 17 HOH WAT . G 5 HOH C 3 21 21 HOH WAT . G 5 HOH C 4 25 25 HOH WAT . G 5 HOH C 5 31 31 HOH WAT . H 5 HOH A 1 1 1 HOH WAT . H 5 HOH A 2 2 2 HOH WAT . H 5 HOH A 3 3 3 HOH WAT . H 5 HOH A 4 4 4 HOH WAT . H 5 HOH A 5 5 5 HOH WAT . H 5 HOH A 6 6 6 HOH WAT . H 5 HOH A 7 7 7 HOH WAT . H 5 HOH A 8 9 9 HOH WAT . H 5 HOH A 9 10 10 HOH WAT . H 5 HOH A 10 11 11 HOH WAT . H 5 HOH A 11 14 14 HOH WAT . H 5 HOH A 12 20 20 HOH WAT . H 5 HOH A 13 22 22 HOH WAT . H 5 HOH A 14 23 23 HOH WAT . H 5 HOH A 15 24 24 HOH WAT . H 5 HOH A 16 27 27 HOH WAT . H 5 HOH A 17 28 28 HOH WAT . H 5 HOH A 18 30 30 HOH WAT . H 5 HOH A 19 32 32 HOH WAT . H 5 HOH A 20 34 34 HOH WAT . H 5 HOH A 21 35 35 HOH WAT . H 5 HOH A 22 36 36 HOH WAT . H 5 HOH A 23 37 37 HOH WAT . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x -20.4 _atom_site.Cartn_y -7.795 _atom_site.Cartn_z 12.544 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 36.64 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 398 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #