data_1CJK # _model_server_result.job_id hwZ8YDN66OWLlBIBuXZljg _model_server_result.datetime_utc '2024-10-26 18:24:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1cjk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":901}' # _entry.id 1CJK # _exptl.entry_id 1CJK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1CJK _cell.length_a 118.9 _cell.length_b 134.9 _cell.length_c 72.2 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CJK _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 8 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 L O HOH . A HOH 53 1_555 D MG MG . A MG 581 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.621 ? metalc ? metalc2 A OD1 ASP 33 A ASP 396 1_555 D MG MG . A MG 581 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.54 ? metalc ? metalc3 A OD2 ASP 33 A ASP 396 1_555 E MN MN . A MN 582 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.983 ? metalc ? metalc4 A O ILE 34 A ILE 397 1_555 E MN MN . A MN 582 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc5 A OD1 ASP 77 A ASP 440 1_555 D MG MG . A MG 581 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc6 A OD2 ASP 77 A ASP 440 1_555 E MN MN . A MN 582 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc7 D MG MG . A MG 581 1_555 G O5' TAT . A TAT 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc8 E MN MN . A MN 582 1_555 G O2B TAT . A TAT 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc9 E MN MN . A MN 582 1_555 G O1A TAT . A TAT 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.593 ? metalc ? metalc10 C OG SER 54 C SER 54 1_555 I MG MG . C MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc11 C OG1 THR 204 C THR 204 1_555 I MG MG . C MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc12 I MG MG . C MG 403 1_555 K O2G GSP . C GSP 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.722 ? metalc ? metalc13 I MG MG . C MG 403 1_555 K O2B GSP . C GSP 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.546 ? metalc ? metalc14 I MG MG . C MG 403 1_555 N O HOH . C HOH 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc15 I MG MG . C MG 403 1_555 N O HOH . C HOH 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 333 n n O1 C6 MES sing 334 n n C2 C3 MES sing 335 n n C2 H21 MES sing 336 n n C2 H22 MES sing 337 n n C3 N4 MES sing 338 n n C3 H31 MES sing 339 n n C3 H32 MES sing 340 n n N4 C5 MES sing 341 n n N4 C7 MES sing 342 n n N4 HN4 MES sing 343 n n C5 C6 MES sing 344 n n C5 H51 MES sing 345 n n C5 H52 MES sing 346 n n C6 H61 MES sing 347 n n C6 H62 MES sing 348 n n C7 C8 MES sing 349 n n C7 H71 MES sing 350 n n C7 H72 MES sing 351 n n C8 S MES sing 352 n n C8 H81 MES sing 353 n n C8 H82 MES sing 354 n n S O1S MES doub 355 n n S O2S MES doub 356 n n S O3S MES sing 357 n n # _atom_sites.entry_id 1CJK _atom_sites.fract_transf_matrix[1][1] 0.00841 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007413 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01385 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MG A 1 581 502 MG MG . E 5 MN A 1 582 503 MN MN . F 6 FOK A 1 701 701 FOK FOK . G 7 TAT A 1 801 801 TAT AGS . H 8 MES A 1 901 901 MES MES . I 4 MG C 1 403 396 MG MG . J 9 CL C 1 404 397 CL CL . K 10 GSP C 1 405 395 GSP GSP . L 11 HOH A 1 11 11 HOH HOH . L 11 HOH A 2 24 24 HOH HOH . L 11 HOH A 3 25 25 HOH HOH . L 11 HOH A 4 27 27 HOH HOH . L 11 HOH A 5 30 30 HOH HOH . L 11 HOH A 6 31 31 HOH HOH . L 11 HOH A 7 33 33 HOH HOH . L 11 HOH A 8 53 53 HOH HOH . M 11 HOH B 1 8 8 HOH HOH . M 11 HOH B 2 9 9 HOH HOH . M 11 HOH B 3 13 13 HOH HOH . M 11 HOH B 4 14 14 HOH HOH . M 11 HOH B 5 15 15 HOH HOH . M 11 HOH B 6 16 16 HOH HOH . M 11 HOH B 7 17 17 HOH HOH . M 11 HOH B 8 18 18 HOH HOH . M 11 HOH B 9 19 19 HOH HOH . M 11 HOH B 10 22 22 HOH HOH . M 11 HOH B 11 26 26 HOH HOH . M 11 HOH B 12 36 36 HOH HOH . N 11 HOH C 1 406 2 HOH HOH . N 11 HOH C 2 407 3 HOH HOH . N 11 HOH C 3 408 7 HOH HOH . N 11 HOH C 4 409 10 HOH HOH . N 11 HOH C 5 410 34 HOH HOH . N 11 HOH C 6 411 39 HOH HOH . N 11 HOH C 7 412 40 HOH HOH . N 11 HOH C 8 413 41 HOH HOH . N 11 HOH C 9 414 43 HOH HOH . N 11 HOH C 10 415 44 HOH HOH . N 11 HOH C 11 416 45 HOH HOH . N 11 HOH C 12 417 49 HOH HOH . N 11 HOH C 13 418 51 HOH HOH . N 11 HOH C 14 419 52 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . H 8 46.157 6.615 49.526 1 69.02 ? O1 MES 901 A 1 HETATM 2 C C2 MES . . . H 8 44.843 6.183 49.232 1 67.8 ? C2 MES 901 A 1 HETATM 3 C C3 MES . . . H 8 44.682 4.713 49.459 1 68.74 ? C3 MES 901 A 1 HETATM 4 N N4 MES . . . H 8 44.959 4.355 50.849 1 69.57 ? N4 MES 901 A 1 HETATM 5 C C5 MES . . . H 8 46.373 4.909 51.219 1 69.56 ? C5 MES 901 A 1 HETATM 6 C C6 MES . . . H 8 46.468 6.36 50.889 1 68.56 ? C6 MES 901 A 1 HETATM 7 C C7 MES . . . H 8 44.777 2.911 51.154 1 68.73 ? C7 MES 901 A 1 HETATM 8 C C8 MES . . . H 8 44.883 2.51 52.615 1 69.73 ? C8 MES 901 A 1 HETATM 9 S S MES . . . H 8 46.246 1.391 52.867 1 71.36 ? S MES 901 A 1 HETATM 10 O O1S MES . . . H 8 47.422 2.097 52.451 1 72.85 ? O1S MES 901 A 1 HETATM 11 O O2S MES . . . H 8 45.979 0.231 52.055 1 70.62 ? O2S MES 901 A 1 HETATM 12 O O3S MES . . . H 8 46.275 1.078 54.277 1 72.37 ? O3S MES 901 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 12 #