data_1CJV # _model_server_result.job_id F7MTxjw6HQNee4jCTkZOgA _model_server_result.datetime_utc '2024-11-21 22:22:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1cjv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":103}' # _entry.id 1CJV # _exptl.entry_id 1CJV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1CJV _cell.length_a 118.4 _cell.length_b 134.2 _cell.length_c 71.6 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CJV _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 8 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 G O2A DAD . A DAD 102 1_555 D ZN ZN . A ZN 581 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc2 G O2G DAD . A DAD 102 1_555 E MG MG . A MG 582 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc3 G O1B DAD . A DAD 102 1_555 E MG MG . A MG 582 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? metalc ? metalc4 G O2A DAD . A DAD 102 1_555 E MG MG . A MG 582 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc5 A OD1 ASP 33 A ASP 396 1_555 D ZN ZN . A ZN 581 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.653 ? metalc ? metalc6 A OD2 ASP 33 A ASP 396 1_555 E MG MG . A MG 582 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc7 A O ILE 34 A ILE 397 1_555 E MG MG . A MG 582 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc8 A OD1 ASP 77 A ASP 440 1_555 D ZN ZN . A ZN 581 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.716 ? metalc ? metalc9 A OD2 ASP 77 A ASP 440 1_555 E MG MG . A MG 582 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc10 C NH2 ARG 42 C ARG 42 1_555 K ZN ZN . C ZN 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? metalc ? metalc11 C OG SER 54 C SER 54 1_555 I MG MG . C MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc12 C OG1 THR 204 C THR 204 1_555 I MG MG . C MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? metalc ? metalc13 C OE2 GLU 209 C GLU 209 1_555 K ZN ZN . C ZN 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.593 ? metalc ? metalc14 C ND1 HIS 220 C HIS 220 1_555 K ZN ZN . C ZN 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc15 I MG MG . C MG 403 1_555 L O2B GSP . C GSP 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.861 ? metalc ? metalc16 I MG MG . C MG 403 1_555 L O2G GSP . C GSP 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.855 ? metalc ? metalc17 I MG MG . C MG 403 1_555 L O3B GSP . C GSP 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.853 ? metalc ? metalc18 I MG MG . C MG 403 1_555 O O HOH . C HOH 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.886 ? metalc ? metalc19 I MG MG . C MG 403 1_555 O O HOH . C HOH 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.845 ? # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 380 n n O1 C6 MES sing 381 n n C2 C3 MES sing 382 n n C2 H21 MES sing 383 n n C2 H22 MES sing 384 n n C3 N4 MES sing 385 n n C3 H31 MES sing 386 n n C3 H32 MES sing 387 n n N4 C5 MES sing 388 n n N4 C7 MES sing 389 n n N4 HN4 MES sing 390 n n C5 C6 MES sing 391 n n C5 H51 MES sing 392 n n C5 H52 MES sing 393 n n C6 H61 MES sing 394 n n C6 H62 MES sing 395 n n C7 C8 MES sing 396 n n C7 H71 MES sing 397 n n C7 H72 MES sing 398 n n C8 S MES sing 399 n n C8 H81 MES sing 400 n n C8 H82 MES sing 401 n n S O1S MES doub 402 n n S O2S MES doub 403 n n S O3S MES sing 404 n n # _atom_sites.entry_id 1CJV _atom_sites.fract_transf_matrix[1][1] 0.008446 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007451 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013966 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN A 1 581 502 ZN ZN . E 5 MG A 1 582 503 MG MG . F 6 FOK A 1 101 101 FOK FOK . G 7 DAD A 1 102 102 DAD DAD . H 8 MES A 1 103 103 MES MES . I 5 MG C 1 403 396 MG MG . J 9 CL C 1 404 397 CL CL . K 4 ZN C 1 405 398 ZN ZN . L 10 GSP C 1 406 395 GSP GSP . M 11 HOH A 1 23 23 HOH HOH . M 11 HOH A 2 24 24 HOH HOH . M 11 HOH A 3 30 30 HOH HOH . M 11 HOH A 4 31 31 HOH HOH . M 11 HOH A 5 33 33 HOH HOH . M 11 HOH A 6 57 57 HOH HOH . N 11 HOH B 1 8 8 HOH HOH . N 11 HOH B 2 9 9 HOH HOH . N 11 HOH B 3 12 12 HOH HOH . N 11 HOH B 4 13 13 HOH HOH . N 11 HOH B 5 14 14 HOH HOH . N 11 HOH B 6 15 15 HOH HOH . N 11 HOH B 7 17 17 HOH HOH . N 11 HOH B 8 18 18 HOH HOH . N 11 HOH B 9 19 19 HOH HOH . N 11 HOH B 10 21 21 HOH HOH . N 11 HOH B 11 22 22 HOH HOH . N 11 HOH B 12 25 25 HOH HOH . N 11 HOH B 13 26 26 HOH HOH . N 11 HOH B 14 28 28 HOH HOH . N 11 HOH B 15 32 32 HOH HOH . N 11 HOH B 16 34 34 HOH HOH . N 11 HOH B 17 35 35 HOH HOH . N 11 HOH B 18 36 36 HOH HOH . N 11 HOH B 19 37 37 HOH HOH . N 11 HOH B 20 38 38 HOH HOH . N 11 HOH B 21 54 54 HOH HOH . O 11 HOH C 1 407 1 HOH HOH . O 11 HOH C 2 408 2 HOH HOH . O 11 HOH C 3 409 3 HOH HOH . O 11 HOH C 4 410 5 HOH HOH . O 11 HOH C 5 411 7 HOH HOH . O 11 HOH C 6 412 10 HOH HOH . O 11 HOH C 7 413 39 HOH HOH . O 11 HOH C 8 414 40 HOH HOH . O 11 HOH C 9 415 41 HOH HOH . O 11 HOH C 10 416 42 HOH HOH . O 11 HOH C 11 417 44 HOH HOH . O 11 HOH C 12 418 45 HOH HOH . O 11 HOH C 13 419 46 HOH HOH . O 11 HOH C 14 420 47 HOH HOH . O 11 HOH C 15 421 49 HOH HOH . O 11 HOH C 16 422 50 HOH HOH . O 11 HOH C 17 423 51 HOH HOH . O 11 HOH C 18 424 52 HOH HOH . O 11 HOH C 19 425 58 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . H 8 45.839 7.107 49.37 1 85.08 ? O1 MES 103 A 1 HETATM 2 C C2 MES . . . H 8 44.506 6.655 49.32 1 84.76 ? C2 MES 103 A 1 HETATM 3 C C3 MES . . . H 8 44.408 5.14 49.346 1 84.79 ? C3 MES 103 A 1 HETATM 4 N N4 MES . . . H 8 44.999 4.621 50.579 1 84.69 ? N4 MES 103 A 1 HETATM 5 C C5 MES . . . H 8 46.431 5.186 50.713 1 84.71 ? C5 MES 103 A 1 HETATM 6 C C6 MES . . . H 8 46.432 6.707 50.58 1 84.95 ? C6 MES 103 A 1 HETATM 7 C C7 MES . . . H 8 44.934 3.149 50.721 1 84.44 ? C7 MES 103 A 1 HETATM 8 C C8 MES . . . H 8 45.393 2.655 52.079 1 85.57 ? C8 MES 103 A 1 HETATM 9 S S MES . . . H 8 45.724 0.899 52.06 1 85.9 ? S MES 103 A 1 HETATM 10 O O1S MES . . . H 8 46.755 0.683 51.076 1 86.63 ? O1S MES 103 A 1 HETATM 11 O O2S MES . . . H 8 44.497 0.297 51.68 1 86.36 ? O2S MES 103 A 1 HETATM 12 O O3S MES . . . H 8 46.147 0.544 53.399 1 86.48 ? O3S MES 103 A 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 393 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 12 #