data_1CJV # _model_server_result.job_id jAnzLA80qPCvjZVPRVwP3A _model_server_result.datetime_utc '2024-11-21 23:19:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1cjv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":403}' # _entry.id 1CJV # _exptl.entry_id 1CJV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1CJV _cell.length_a 118.4 _cell.length_b 134.2 _cell.length_c 71.6 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CJV _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 G O2A DAD . A DAD 102 1_555 D ZN ZN . A ZN 581 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc2 G O2G DAD . A DAD 102 1_555 E MG MG . A MG 582 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc3 G O1B DAD . A DAD 102 1_555 E MG MG . A MG 582 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? metalc ? metalc4 G O2A DAD . A DAD 102 1_555 E MG MG . A MG 582 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc5 A OD1 ASP 33 A ASP 396 1_555 D ZN ZN . A ZN 581 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.653 ? metalc ? metalc6 A OD2 ASP 33 A ASP 396 1_555 E MG MG . A MG 582 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc7 A O ILE 34 A ILE 397 1_555 E MG MG . A MG 582 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc8 A OD1 ASP 77 A ASP 440 1_555 D ZN ZN . A ZN 581 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.716 ? metalc ? metalc9 A OD2 ASP 77 A ASP 440 1_555 E MG MG . A MG 582 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc10 C NH2 ARG 42 C ARG 42 1_555 K ZN ZN . C ZN 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? metalc ? metalc11 C OG SER 54 C SER 54 1_555 I MG MG . C MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc12 C OG1 THR 204 C THR 204 1_555 I MG MG . C MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? metalc ? metalc13 C OE2 GLU 209 C GLU 209 1_555 K ZN ZN . C ZN 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.593 ? metalc ? metalc14 C ND1 HIS 220 C HIS 220 1_555 K ZN ZN . C ZN 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc15 I MG MG . C MG 403 1_555 L O2B GSP . C GSP 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.861 ? metalc ? metalc16 I MG MG . C MG 403 1_555 L O2G GSP . C GSP 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.855 ? metalc ? metalc17 I MG MG . C MG 403 1_555 L O3B GSP . C GSP 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.853 ? metalc ? metalc18 I MG MG . C MG 403 1_555 O O HOH . C HOH 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.886 ? metalc ? metalc19 I MG MG . C MG 403 1_555 O O HOH . C HOH 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.845 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1CJV _atom_sites.fract_transf_matrix[1][1] 0.008446 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007451 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013966 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN A 1 581 502 ZN ZN . E 5 MG A 1 582 503 MG MG . F 6 FOK A 1 101 101 FOK FOK . G 7 DAD A 1 102 102 DAD DAD . H 8 MES A 1 103 103 MES MES . I 5 MG C 1 403 396 MG MG . J 9 CL C 1 404 397 CL CL . K 4 ZN C 1 405 398 ZN ZN . L 10 GSP C 1 406 395 GSP GSP . M 11 HOH A 1 23 23 HOH HOH . M 11 HOH A 2 24 24 HOH HOH . M 11 HOH A 3 30 30 HOH HOH . M 11 HOH A 4 31 31 HOH HOH . M 11 HOH A 5 33 33 HOH HOH . M 11 HOH A 6 57 57 HOH HOH . N 11 HOH B 1 8 8 HOH HOH . N 11 HOH B 2 9 9 HOH HOH . N 11 HOH B 3 12 12 HOH HOH . N 11 HOH B 4 13 13 HOH HOH . N 11 HOH B 5 14 14 HOH HOH . N 11 HOH B 6 15 15 HOH HOH . N 11 HOH B 7 17 17 HOH HOH . N 11 HOH B 8 18 18 HOH HOH . N 11 HOH B 9 19 19 HOH HOH . N 11 HOH B 10 21 21 HOH HOH . N 11 HOH B 11 22 22 HOH HOH . N 11 HOH B 12 25 25 HOH HOH . N 11 HOH B 13 26 26 HOH HOH . N 11 HOH B 14 28 28 HOH HOH . N 11 HOH B 15 32 32 HOH HOH . N 11 HOH B 16 34 34 HOH HOH . N 11 HOH B 17 35 35 HOH HOH . N 11 HOH B 18 36 36 HOH HOH . N 11 HOH B 19 37 37 HOH HOH . N 11 HOH B 20 38 38 HOH HOH . N 11 HOH B 21 54 54 HOH HOH . O 11 HOH C 1 407 1 HOH HOH . O 11 HOH C 2 408 2 HOH HOH . O 11 HOH C 3 409 3 HOH HOH . O 11 HOH C 4 410 5 HOH HOH . O 11 HOH C 5 411 7 HOH HOH . O 11 HOH C 6 412 10 HOH HOH . O 11 HOH C 7 413 39 HOH HOH . O 11 HOH C 8 414 40 HOH HOH . O 11 HOH C 9 415 41 HOH HOH . O 11 HOH C 10 416 42 HOH HOH . O 11 HOH C 11 417 44 HOH HOH . O 11 HOH C 12 418 45 HOH HOH . O 11 HOH C 13 419 46 HOH HOH . O 11 HOH C 14 420 47 HOH HOH . O 11 HOH C 15 421 49 HOH HOH . O 11 HOH C 16 422 50 HOH HOH . O 11 HOH C 17 423 51 HOH HOH . O 11 HOH C 18 424 52 HOH HOH . O 11 HOH C 19 425 58 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 5 _atom_site.Cartn_x 21.289 _atom_site.Cartn_y 2.766 _atom_site.Cartn_z 30.592 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 6.99 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 403 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 340 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #