data_1CK6 # _model_server_result.job_id yaOmtRub321t7QMwIo7dfg _model_server_result.datetime_utc '2024-10-12 22:13:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ck6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":347}' # _entry.id 1CK6 # _exptl.entry_id 1CK6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1CK6 _cell.length_a 74.41 _cell.length_b 74.41 _cell.length_c 116.95 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CK6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 42 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B NAG 1 B 1 NAG ? 348 NAG 2 n B NAG 2 B 2 NAG ? 349 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 12 A CYS 12 1_555 A SG CYS 24 A CYS 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? disulf ? disulf2 A SG CYS 23 A CYS 23 1_555 A SG CYS 293 A CYS 293 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 A SG CYS 43 A CYS 43 1_555 A SG CYS 129 A CYS 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? disulf ? disulf4 A SG CYS 257 A CYS 257 1_555 A SG CYS 322 A CYS 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? covale ? covale1 A ND2 ASN 143 A ASN 143 1_555 B C1 NAG . B NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale2 A OG SER 339 A SER 339 1_555 C C1 BMA . A BMA 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.405 ? covale ? covale3 B O4 NAG . B NAG 1 1_555 B C1 NAG . B NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.414 ? metalc ? metalc1 A O ASP 57 A ASP 57 1_555 D CA CA . A CA 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.543 ? metalc ? metalc2 A OD1 ASP 57 A ASP 57 1_555 D CA CA . A CA 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc3 A O GLY 75 A GLY 75 1_555 D CA CA . A CA 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.564 ? metalc ? metalc4 A OD1 ASP 77 A ASP 77 1_555 D CA CA . A CA 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.474 ? metalc ? metalc5 A OG SER 79 A SER 79 1_555 D CA CA . A CA 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.613 ? metalc ? metalc6 A NE2 HIS 184 A HIS 184 1_555 G FE HEM . A HEM 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? metalc ? metalc7 A O SER 185 A SER 185 1_555 E CA CA . A CA 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc8 A OG SER 185 A SER 185 1_555 E CA CA . A CA 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.516 ? metalc ? metalc9 A OD1 ASP 202 A ASP 202 1_555 E CA CA . A CA 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.681 ? metalc ? metalc10 A OD2 ASP 202 A ASP 202 1_555 E CA CA . A CA 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.506 ? metalc ? metalc11 A O THR 204 A THR 204 1_555 E CA CA . A CA 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc12 A OG1 THR 204 A THR 204 1_555 E CA CA . A CA 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? metalc ? metalc13 A O VAL 207 A VAL 207 1_555 E CA CA . A CA 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.563 ? metalc ? metalc14 A OD1 ASP 209 A ASP 209 1_555 E CA CA . A CA 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? metalc ? metalc15 G FE HEM . A HEM 345 1_555 H O HOH . A HOH 365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.814 ? metalc ? metalc16 D CA CA . A CA 346 1_555 H O HOH . A HOH 424 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? metalc ? metalc17 D CA CA . A CA 346 1_555 H O HOH . A HOH 425 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.724 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1CK6 _atom_sites.fract_transf_matrix[1][1] 0.013439 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013439 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008551 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 BMA A 1 350 350 BMA MAN . D 4 CA A 1 346 346 CA CA . E 4 CA A 1 347 347 CA CA . F 5 SHA A 1 900 900 SHA SHA . G 6 HEM A 1 345 345 HEM HEM . H 7 HOH A 1 354 354 HOH HOH . H 7 HOH A 2 356 356 HOH HOH . H 7 HOH A 3 357 357 HOH HOH . H 7 HOH A 4 358 358 HOH HOH . H 7 HOH A 5 360 360 HOH HOH . H 7 HOH A 6 361 361 HOH HOH . H 7 HOH A 7 362 362 HOH HOH . H 7 HOH A 8 363 363 HOH HOH . H 7 HOH A 9 365 365 HOH HOH . H 7 HOH A 10 366 366 HOH HOH . H 7 HOH A 11 367 367 HOH HOH . H 7 HOH A 12 368 368 HOH HOH . H 7 HOH A 13 369 369 HOH HOH . H 7 HOH A 14 370 370 HOH HOH . H 7 HOH A 15 371 371 HOH HOH . H 7 HOH A 16 376 376 HOH HOH . H 7 HOH A 17 378 378 HOH HOH . H 7 HOH A 18 379 379 HOH HOH . H 7 HOH A 19 380 380 HOH HOH . H 7 HOH A 20 381 381 HOH HOH . H 7 HOH A 21 382 382 HOH HOH . H 7 HOH A 22 383 383 HOH HOH . H 7 HOH A 23 384 384 HOH HOH . H 7 HOH A 24 385 385 HOH HOH . H 7 HOH A 25 387 387 HOH HOH . H 7 HOH A 26 389 389 HOH HOH . H 7 HOH A 27 390 390 HOH HOH . H 7 HOH A 28 392 392 HOH HOH . H 7 HOH A 29 393 393 HOH HOH . H 7 HOH A 30 394 394 HOH HOH . H 7 HOH A 31 395 395 HOH HOH . H 7 HOH A 32 396 396 HOH HOH . H 7 HOH A 33 397 397 HOH HOH . H 7 HOH A 34 398 398 HOH HOH . H 7 HOH A 35 399 399 HOH HOH . H 7 HOH A 36 400 400 HOH HOH . H 7 HOH A 37 402 402 HOH HOH . H 7 HOH A 38 403 403 HOH HOH . H 7 HOH A 39 404 404 HOH HOH . H 7 HOH A 40 405 405 HOH HOH . H 7 HOH A 41 406 406 HOH HOH . H 7 HOH A 42 407 407 HOH HOH . H 7 HOH A 43 408 408 HOH HOH . H 7 HOH A 44 409 409 HOH HOH . H 7 HOH A 45 410 410 HOH HOH . H 7 HOH A 46 411 411 HOH HOH . H 7 HOH A 47 413 413 HOH HOH . H 7 HOH A 48 414 414 HOH HOH . H 7 HOH A 49 417 417 HOH HOH . H 7 HOH A 50 421 421 HOH HOH . H 7 HOH A 51 422 422 HOH HOH . H 7 HOH A 52 423 423 HOH HOH . H 7 HOH A 53 424 424 HOH HOH . H 7 HOH A 54 425 425 HOH HOH . H 7 HOH A 55 426 426 HOH HOH . H 7 HOH A 56 437 437 HOH HOH . H 7 HOH A 57 439 439 HOH HOH . H 7 HOH A 58 444 444 HOH HOH . H 7 HOH A 59 445 445 HOH HOH . H 7 HOH A 60 446 446 HOH HOH . H 7 HOH A 61 448 448 HOH HOH . H 7 HOH A 62 450 450 HOH HOH . H 7 HOH A 63 454 454 HOH HOH . H 7 HOH A 64 456 456 HOH HOH . H 7 HOH A 65 460 460 HOH HOH . H 7 HOH A 66 463 463 HOH HOH . H 7 HOH A 67 465 465 HOH HOH . H 7 HOH A 68 466 466 HOH HOH . H 7 HOH A 69 467 467 HOH HOH . H 7 HOH A 70 469 469 HOH HOH . H 7 HOH A 71 470 470 HOH HOH . H 7 HOH A 72 471 471 HOH HOH . H 7 HOH A 73 473 473 HOH HOH . H 7 HOH A 74 480 480 HOH HOH . H 7 HOH A 75 481 481 HOH HOH . H 7 HOH A 76 483 483 HOH HOH . H 7 HOH A 77 484 484 HOH HOH . H 7 HOH A 78 485 485 HOH HOH . H 7 HOH A 79 490 490 HOH HOH . H 7 HOH A 80 491 491 HOH HOH . H 7 HOH A 81 492 492 HOH HOH . H 7 HOH A 82 493 493 HOH HOH . H 7 HOH A 83 494 494 HOH HOH . H 7 HOH A 84 496 496 HOH HOH . H 7 HOH A 85 499 499 HOH HOH . H 7 HOH A 86 501 501 HOH HOH . H 7 HOH A 87 502 502 HOH HOH . H 7 HOH A 88 503 503 HOH HOH . H 7 HOH A 89 506 506 HOH HOH . H 7 HOH A 90 507 507 HOH HOH . H 7 HOH A 91 509 509 HOH HOH . H 7 HOH A 92 510 510 HOH HOH . H 7 HOH A 93 511 511 HOH HOH . H 7 HOH A 94 512 512 HOH HOH . H 7 HOH A 95 513 513 HOH HOH . H 7 HOH A 96 514 514 HOH HOH . H 7 HOH A 97 515 515 HOH HOH . H 7 HOH A 98 516 516 HOH HOH . H 7 HOH A 99 520 520 HOH HOH . H 7 HOH A 100 522 522 HOH HOH . H 7 HOH A 101 524 524 HOH HOH . H 7 HOH A 102 525 525 HOH HOH . H 7 HOH A 103 526 526 HOH HOH . H 7 HOH A 104 527 527 HOH HOH . H 7 HOH A 105 528 528 HOH HOH . H 7 HOH A 106 529 529 HOH HOH . H 7 HOH A 107 530 530 HOH HOH . H 7 HOH A 108 531 531 HOH HOH . H 7 HOH A 109 532 532 HOH HOH . H 7 HOH A 110 535 535 HOH HOH . H 7 HOH A 111 537 537 HOH HOH . H 7 HOH A 112 538 538 HOH HOH . H 7 HOH A 113 542 542 HOH HOH . H 7 HOH A 114 546 546 HOH HOH . H 7 HOH A 115 547 547 HOH HOH . H 7 HOH A 116 549 549 HOH HOH . H 7 HOH A 117 554 554 HOH HOH . H 7 HOH A 118 555 555 HOH HOH . H 7 HOH A 119 558 558 HOH HOH . H 7 HOH A 120 571 571 HOH HOH . H 7 HOH A 121 572 572 HOH HOH . H 7 HOH A 122 577 577 HOH HOH . H 7 HOH A 123 583 583 HOH HOH . H 7 HOH A 124 584 584 HOH HOH . H 7 HOH A 125 585 585 HOH HOH . H 7 HOH A 126 592 592 HOH HOH . H 7 HOH A 127 595 595 HOH HOH . H 7 HOH A 128 597 597 HOH HOH . H 7 HOH A 129 600 600 HOH HOH . H 7 HOH A 130 601 601 HOH HOH . H 7 HOH A 131 604 604 HOH HOH . H 7 HOH A 132 605 605 HOH HOH . H 7 HOH A 133 609 609 HOH HOH . H 7 HOH A 134 610 610 HOH HOH . H 7 HOH A 135 614 614 HOH HOH . H 7 HOH A 136 615 615 HOH HOH . H 7 HOH A 137 616 616 HOH HOH . H 7 HOH A 138 618 618 HOH HOH . H 7 HOH A 139 619 619 HOH HOH . H 7 HOH A 140 620 620 HOH HOH . H 7 HOH A 141 622 622 HOH HOH . H 7 HOH A 142 627 627 HOH HOH . H 7 HOH A 143 628 628 HOH HOH . H 7 HOH A 144 630 630 HOH HOH . H 7 HOH A 145 638 638 HOH HOH . H 7 HOH A 146 640 640 HOH HOH . H 7 HOH A 147 641 641 HOH HOH . H 7 HOH A 148 642 642 HOH HOH . H 7 HOH A 149 645 645 HOH HOH . H 7 HOH A 150 646 646 HOH HOH . H 7 HOH A 151 647 647 HOH HOH . H 7 HOH A 152 649 649 HOH HOH . H 7 HOH A 153 652 652 HOH HOH . H 7 HOH A 154 656 656 HOH HOH . H 7 HOH A 155 658 658 HOH HOH . H 7 HOH A 156 660 660 HOH HOH . H 7 HOH A 157 663 663 HOH HOH . H 7 HOH A 158 665 665 HOH HOH . H 7 HOH A 159 668 668 HOH HOH . H 7 HOH A 160 669 669 HOH HOH . H 7 HOH A 161 670 670 HOH HOH . H 7 HOH A 162 671 671 HOH HOH . H 7 HOH A 163 672 672 HOH HOH . H 7 HOH A 164 673 673 HOH HOH . H 7 HOH A 165 677 677 HOH HOH . H 7 HOH A 166 678 678 HOH HOH . H 7 HOH A 167 681 681 HOH HOH . H 7 HOH A 168 683 683 HOH HOH . H 7 HOH A 169 687 687 HOH HOH . H 7 HOH A 170 688 688 HOH HOH . H 7 HOH A 171 689 689 HOH HOH . H 7 HOH A 172 690 690 HOH HOH . H 7 HOH A 173 694 694 HOH HOH . H 7 HOH A 174 695 695 HOH HOH . H 7 HOH A 175 696 696 HOH HOH . H 7 HOH A 176 698 698 HOH HOH . H 7 HOH A 177 699 699 HOH HOH . H 7 HOH A 178 803 803 HOH HOH . H 7 HOH A 179 805 805 HOH HOH . H 7 HOH A 180 806 806 HOH HOH . H 7 HOH A 181 807 807 HOH HOH . H 7 HOH A 182 808 808 HOH HOH . H 7 HOH A 183 811 811 HOH HOH . H 7 HOH A 184 812 812 HOH HOH . H 7 HOH A 185 813 813 HOH HOH . H 7 HOH A 186 815 815 HOH HOH . H 7 HOH A 187 816 816 HOH HOH . H 7 HOH A 188 817 817 HOH HOH . H 7 HOH A 189 818 818 HOH HOH . H 7 HOH A 190 819 819 HOH HOH . H 7 HOH A 191 820 820 HOH HOH . H 7 HOH A 192 821 821 HOH HOH . H 7 HOH A 193 823 823 HOH HOH . H 7 HOH A 194 829 829 HOH HOH . H 7 HOH A 195 830 830 HOH HOH . H 7 HOH A 196 832 832 HOH HOH . H 7 HOH A 197 833 833 HOH HOH . H 7 HOH A 198 834 834 HOH HOH . H 7 HOH A 199 835 835 HOH HOH . H 7 HOH A 200 836 836 HOH HOH . H 7 HOH A 201 837 837 HOH HOH . H 7 HOH A 202 840 840 HOH HOH . H 7 HOH A 203 841 841 HOH HOH . H 7 HOH A 204 842 842 HOH HOH . H 7 HOH A 205 844 844 HOH HOH . H 7 HOH A 206 845 845 HOH HOH . H 7 HOH A 207 847 847 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 4 _atom_site.Cartn_x 29.864 _atom_site.Cartn_y 21.197 _atom_site.Cartn_z 22.95 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 17.97 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 347 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #