data_1CKP
#
_model_server_result.job_id            J2VqxAHJ7phkFuiON3MztA 
_model_server_result.datetime_utc      '2024-10-19 20:17:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1ckp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":299}' 
#
_entry.id    1CKP 
#
_exptl.entry_id    1CKP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              432.904 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PURVALANOL B' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1CKP 
_cell.length_a            53.55 
_cell.length_b            71.35 
_cell.length_c            72 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1CKP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C20 H25 Cl N6 O3' 
_chem_comp.formula_weight    432.904 
_chem_comp.id                PVB 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PURVALANOL B' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '2-CHLORO-4-{[2-{[(1R)-1-(HYDROXYMETHYL)-2-METHYLPROPYL]AMINO}-9-(1-METHYLETHYL)-9H-PURIN-6-YL]AMINO}BENZOIC ACID' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 PVB sing 286 n y 
N1 C6 PVB doub 287 n y 
C9 N9 PVB sing 288 n n 
C9 C11 PVB sing 289 n n 
C9 C10 PVB sing 290 n n 
N9 C4 PVB sing 291 n y 
N9 C8 PVB sing 292 n y 
C4 N3 PVB sing 293 n y 
C4 C5 PVB doub 294 n y 
N3 C2 PVB doub 295 n y 
C2 N2 PVB sing 296 n n 
C6 C5 PVB sing 297 n y 
C6 N6 PVB sing 298 n n 
C5 N7 PVB sing 299 n y 
N7 C8 PVB doub 300 n y 
N6 C1A PVB sing 301 n n 
C1A C2A PVB doub 302 n y 
C1A C6A PVB sing 303 n y 
C2A C3A PVB sing 304 n y 
C3A C4A PVB doub 305 n y 
C4A C5A PVB sing 306 n y 
C4A CX PVB sing 307 n n 
C5A CL1 PVB sing 308 n n 
C5A C6A PVB doub 309 n y 
CX OX1 PVB sing 310 n n 
CX OX2 PVB doub 311 n n 
N2 C12 PVB sing 312 n n 
C12 C13 PVB sing 313 n n 
C12 C15 PVB sing 314 n n 
C13 C16 PVB sing 315 n n 
C13 C14 PVB sing 316 n n 
C15 O1 PVB sing 317 n n 
C9 H9 PVB sing 318 n n 
C11 H111 PVB sing 319 n n 
C11 H112 PVB sing 320 n n 
C11 H113 PVB sing 321 n n 
C10 H101 PVB sing 322 n n 
C10 H102 PVB sing 323 n n 
C10 H103 PVB sing 324 n n 
C8 H8 PVB sing 325 n n 
N2 H2 PVB sing 326 n n 
N6 H6 PVB sing 327 n n 
C2A H2A PVB sing 328 n n 
C6A H6A PVB sing 329 n n 
C3A H3A PVB sing 330 n n 
OX1 HX1 PVB sing 331 n n 
C12 H12 PVB sing 332 n n 
C13 H13 PVB sing 333 n n 
C15 H151 PVB sing 334 n n 
C15 H152 PVB sing 335 n n 
C16 H161 PVB sing 336 n n 
C16 H162 PVB sing 337 n n 
C16 H163 PVB sing 338 n n 
C14 H141 PVB sing 339 n n 
C14 H142 PVB sing 340 n n 
C14 H143 PVB sing 341 n n 
O1 H1 PVB sing 342 n n 
#
_atom_sites.entry_id                     1CKP 
_atom_sites.fract_transf_matrix[1][1]    0.018674 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014015 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013889 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 PVB A 1 299 1 PVB PVB . 
C 3 EDO A 1 300 2 EDO EDO . 
D 4 HOH A 1 301 3 HOH HOH . 
D 4 HOH A 2 302 4 HOH HOH . 
D 4 HOH A 3 303 5 HOH HOH . 
D 4 HOH A 4 304 6 HOH HOH . 
D 4 HOH A 5 305 7 HOH HOH . 
D 4 HOH A 6 306 8 HOH HOH . 
D 4 HOH A 7 307 9 HOH HOH . 
D 4 HOH A 8 308 10 HOH HOH . 
D 4 HOH A 9 309 11 HOH HOH . 
D 4 HOH A 10 310 12 HOH HOH . 
D 4 HOH A 11 311 13 HOH HOH . 
D 4 HOH A 12 312 14 HOH HOH . 
D 4 HOH A 13 313 15 HOH HOH . 
D 4 HOH A 14 314 16 HOH HOH . 
D 4 HOH A 15 315 17 HOH HOH . 
D 4 HOH A 16 316 18 HOH HOH . 
D 4 HOH A 17 317 19 HOH HOH . 
D 4 HOH A 18 318 20 HOH HOH . 
D 4 HOH A 19 319 21 HOH HOH . 
D 4 HOH A 20 320 22 HOH HOH . 
D 4 HOH A 21 321 23 HOH HOH . 
D 4 HOH A 22 322 24 HOH HOH . 
D 4 HOH A 23 323 25 HOH HOH . 
D 4 HOH A 24 324 26 HOH HOH . 
D 4 HOH A 25 325 27 HOH HOH . 
D 4 HOH A 26 326 28 HOH HOH . 
D 4 HOH A 27 327 29 HOH HOH . 
D 4 HOH A 28 328 30 HOH HOH . 
D 4 HOH A 29 329 31 HOH HOH . 
D 4 HOH A 30 330 32 HOH HOH . 
D 4 HOH A 31 331 33 HOH HOH . 
D 4 HOH A 32 332 34 HOH HOH . 
D 4 HOH A 33 333 35 HOH HOH . 
D 4 HOH A 34 334 36 HOH HOH . 
D 4 HOH A 35 335 37 HOH HOH . 
D 4 HOH A 36 336 38 HOH HOH . 
D 4 HOH A 37 337 39 HOH HOH . 
D 4 HOH A 38 338 40 HOH HOH . 
D 4 HOH A 39 339 41 HOH HOH . 
D 4 HOH A 40 340 42 HOH HOH . 
D 4 HOH A 41 341 43 HOH HOH . 
D 4 HOH A 42 342 44 HOH HOH . 
D 4 HOH A 43 343 45 HOH HOH . 
D 4 HOH A 44 344 46 HOH HOH . 
D 4 HOH A 45 345 47 HOH HOH . 
D 4 HOH A 46 346 48 HOH HOH . 
D 4 HOH A 47 347 49 HOH HOH . 
D 4 HOH A 48 348 50 HOH HOH . 
D 4 HOH A 49 349 51 HOH HOH . 
D 4 HOH A 50 350 52 HOH HOH . 
D 4 HOH A 51 351 53 HOH HOH . 
D 4 HOH A 52 352 54 HOH HOH . 
D 4 HOH A 53 353 55 HOH HOH . 
D 4 HOH A 54 354 56 HOH HOH . 
D 4 HOH A 55 355 57 HOH HOH . 
D 4 HOH A 56 356 58 HOH HOH . 
D 4 HOH A 57 357 59 HOH HOH . 
D 4 HOH A 58 358 60 HOH HOH . 
D 4 HOH A 59 359 61 HOH HOH . 
D 4 HOH A 60 360 62 HOH HOH . 
D 4 HOH A 61 361 63 HOH HOH . 
D 4 HOH A 62 362 64 HOH HOH . 
D 4 HOH A 63 363 65 HOH HOH . 
D 4 HOH A 64 364 66 HOH HOH . 
D 4 HOH A 65 365 67 HOH HOH . 
D 4 HOH A 66 366 68 HOH HOH . 
D 4 HOH A 67 367 69 HOH HOH . 
D 4 HOH A 68 368 70 HOH HOH . 
D 4 HOH A 69 369 71 HOH HOH . 
D 4 HOH A 70 370 72 HOH HOH . 
D 4 HOH A 71 371 73 HOH HOH . 
D 4 HOH A 72 372 74 HOH HOH . 
D 4 HOH A 73 373 75 HOH HOH . 
D 4 HOH A 74 374 76 HOH HOH . 
D 4 HOH A 75 375 77 HOH HOH . 
D 4 HOH A 76 376 78 HOH HOH . 
D 4 HOH A 77 377 79 HOH HOH . 
D 4 HOH A 78 378 80 HOH HOH . 
D 4 HOH A 79 379 81 HOH HOH . 
D 4 HOH A 80 380 82 HOH HOH . 
D 4 HOH A 81 381 83 HOH HOH . 
D 4 HOH A 82 382 84 HOH HOH . 
D 4 HOH A 83 383 85 HOH HOH . 
D 4 HOH A 84 384 86 HOH HOH . 
D 4 HOH A 85 385 87 HOH HOH . 
D 4 HOH A 86 386 88 HOH HOH . 
D 4 HOH A 87 387 89 HOH HOH . 
D 4 HOH A 88 388 90 HOH HOH . 
D 4 HOH A 89 389 91 HOH HOH . 
D 4 HOH A 90 390 92 HOH HOH . 
D 4 HOH A 91 391 93 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 PVB . . . B 2 24.781 27.744 28.186 1 36.48 ? N1 PVB 299 A 1 
HETATM 2 C C9 PVB . . . B 2 28.479 31.45 27.66 1 28.09 ? C9 PVB 299 A 1 
HETATM 3 N N9 PVB . . . B 2 27.143 31.047 28.23 1 31.15 ? N9 PVB 299 A 1 
HETATM 4 C C4 PVB . . . B 2 26.469 29.811 28.13 1 34.61 ? C4 PVB 299 A 1 
HETATM 5 N N3 PVB . . . B 2 26.893 28.681 27.488 1 36.93 ? N3 PVB 299 A 1 
HETATM 6 C C2 PVB . . . B 2 26.015 27.692 27.554 1 38.06 ? C2 PVB 299 A 1 
HETATM 7 C C6 PVB . . . B 2 24.334 28.883 28.841 1 35.94 ? C6 PVB 299 A 1 
HETATM 8 C C5 PVB . . . B 2 25.254 30.017 28.817 1 34.07 ? C5 PVB 299 A 1 
HETATM 9 N N7 PVB . . . B 2 25.16 31.271 29.334 1 31.09 ? N7 PVB 299 A 1 
HETATM 10 C C8 PVB . . . B 2 26.287 31.88 28.975 1 28.3 ? C8 PVB 299 A 1 
HETATM 11 N N6 PVB . A . B 2 23.078 28.911 29.462 0.65 38.7 ? N6 PVB 299 A 1 
HETATM 12 N N6 PVB . B . B 2 23.073 28.906 29.456 0.35 38.55 ? N6 PVB 299 A 1 
HETATM 13 C C1A PVB . A . B 2 22.353 27.659 29.638 0.65 41.05 ? C1A PVB 299 A 1 
HETATM 14 C C1A PVB . B . B 2 22.415 27.633 29.72 0.35 40.75 ? C1A PVB 299 A 1 
HETATM 15 C C2A PVB . A . B 2 22.106 27.187 30.928 0.65 41.63 ? C2A PVB 299 A 1 
HETATM 16 C C2A PVB . B . B 2 22.242 26.702 28.684 0.35 41.89 ? C2A PVB 299 A 1 
HETATM 17 C C3A PVB . A . B 2 21.406 25.996 31.125 0.65 43.41 ? C3A PVB 299 A 1 
HETATM 18 C C3A PVB . B . B 2 21.613 25.486 28.92 0.35 42.81 ? C3A PVB 299 A 1 
HETATM 19 C C4A PVB . A . B 2 20.945 25.262 30.029 0.65 43.43 ? C4A PVB 299 A 1 
HETATM 20 C C4A PVB . B . B 2 21.144 25.186 30.194 0.35 43.71 ? C4A PVB 299 A 1 
HETATM 21 C C5A PVB . A . B 2 21.187 25.726 28.731 0.65 44.57 ? C5A PVB 299 A 1 
HETATM 22 C C5A PVB . B . B 2 21.31 26.115 31.243 0.35 43.92 ? C5A PVB 299 A 1 
HETATM 23 CL CL1 PVB . A . B 2 20.621 24.832 27.377 0.65 47.99 ? CL1 PVB 299 A 1 
HETATM 24 CL CL1 PVB . B . B 2 20.732 25.762 32.831 0.35 47.11 ? CL1 PVB 299 A 1 
HETATM 25 C C6A PVB . A . B 2 21.889 26.923 28.536 0.65 43.28 ? C6A PVB 299 A 1 
HETATM 26 C C6A PVB . B . B 2 21.943 27.33 30.997 0.35 42.17 ? C6A PVB 299 A 1 
#
_model_server_stats.io_time_ms              120 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           26 
#