data_1CL0 # _model_server_result.job_id PVF0oxSPNpmAUIwFQEa-Dw _model_server_result.datetime_utc '2024-11-05 01:17:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1cl0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":500}' # _entry.id 1CL0 # _exptl.entry_id 1CL0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1CL0 _cell.length_a 121.298 _cell.length_b 121.298 _cell.length_c 81.32 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CL0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 63 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 1CL0 _atom_sites.fract_transf_matrix[1][1] 0.008244 _atom_sites.fract_transf_matrix[1][2] 0.00476 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009519 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012297 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 500 500 FAD FAD . C 3 HOH A 1 601 601 HOH HOH . C 3 HOH A 2 602 602 HOH HOH . C 3 HOH A 3 603 603 HOH HOH . C 3 HOH A 4 604 604 HOH HOH . C 3 HOH A 5 605 605 HOH HOH . C 3 HOH A 6 606 606 HOH HOH . C 3 HOH A 7 607 607 HOH HOH . C 3 HOH A 8 609 609 HOH HOH . C 3 HOH A 9 610 610 HOH HOH . C 3 HOH A 10 611 611 HOH HOH . C 3 HOH A 11 612 612 HOH HOH . C 3 HOH A 12 613 613 HOH HOH . C 3 HOH A 13 614 614 HOH HOH . C 3 HOH A 14 615 615 HOH HOH . C 3 HOH A 15 616 616 HOH HOH . C 3 HOH A 16 617 617 HOH HOH . C 3 HOH A 17 618 618 HOH HOH . C 3 HOH A 18 619 619 HOH HOH . C 3 HOH A 19 620 620 HOH HOH . C 3 HOH A 20 622 622 HOH HOH . C 3 HOH A 21 623 623 HOH HOH . C 3 HOH A 22 624 624 HOH HOH . C 3 HOH A 23 626 626 HOH HOH . C 3 HOH A 24 627 627 HOH HOH . C 3 HOH A 25 628 628 HOH HOH . C 3 HOH A 26 629 629 HOH HOH . C 3 HOH A 27 631 631 HOH HOH . C 3 HOH A 28 632 632 HOH HOH . C 3 HOH A 29 633 633 HOH HOH . C 3 HOH A 30 634 634 HOH HOH . C 3 HOH A 31 636 636 HOH HOH . C 3 HOH A 32 637 637 HOH HOH . C 3 HOH A 33 638 638 HOH HOH . C 3 HOH A 34 639 639 HOH HOH . C 3 HOH A 35 640 640 HOH HOH . C 3 HOH A 36 641 641 HOH HOH . C 3 HOH A 37 642 642 HOH HOH . C 3 HOH A 38 643 643 HOH HOH . C 3 HOH A 39 644 644 HOH HOH . C 3 HOH A 40 646 646 HOH HOH . C 3 HOH A 41 647 647 HOH HOH . C 3 HOH A 42 648 648 HOH HOH . C 3 HOH A 43 649 649 HOH HOH . C 3 HOH A 44 651 651 HOH HOH . C 3 HOH A 45 653 653 HOH HOH . C 3 HOH A 46 654 654 HOH HOH . C 3 HOH A 47 655 655 HOH HOH . C 3 HOH A 48 656 656 HOH HOH . C 3 HOH A 49 657 657 HOH HOH . C 3 HOH A 50 658 658 HOH HOH . C 3 HOH A 51 659 659 HOH HOH . C 3 HOH A 52 660 660 HOH HOH . C 3 HOH A 53 661 661 HOH HOH . C 3 HOH A 54 663 663 HOH HOH . C 3 HOH A 55 664 664 HOH HOH . C 3 HOH A 56 665 665 HOH HOH . C 3 HOH A 57 666 666 HOH HOH . C 3 HOH A 58 667 667 HOH HOH . C 3 HOH A 59 668 668 HOH HOH . C 3 HOH A 60 669 669 HOH HOH . C 3 HOH A 61 670 670 HOH HOH . C 3 HOH A 62 671 671 HOH HOH . C 3 HOH A 63 672 672 HOH HOH . C 3 HOH A 64 674 674 HOH HOH . C 3 HOH A 65 675 675 HOH HOH . C 3 HOH A 66 676 676 HOH HOH . C 3 HOH A 67 677 677 HOH HOH . C 3 HOH A 68 678 678 HOH HOH . C 3 HOH A 69 679 679 HOH HOH . C 3 HOH A 70 680 680 HOH HOH . C 3 HOH A 71 681 681 HOH HOH . C 3 HOH A 72 682 682 HOH HOH . C 3 HOH A 73 683 683 HOH HOH . C 3 HOH A 74 684 684 HOH HOH . C 3 HOH A 75 687 687 HOH HOH . C 3 HOH A 76 688 688 HOH HOH . C 3 HOH A 77 689 689 HOH HOH . C 3 HOH A 78 693 693 HOH HOH . C 3 HOH A 79 694 694 HOH HOH . C 3 HOH A 80 695 695 HOH HOH . C 3 HOH A 81 696 696 HOH HOH . C 3 HOH A 82 697 697 HOH HOH . C 3 HOH A 83 698 698 HOH HOH . C 3 HOH A 84 700 700 HOH HOH . C 3 HOH A 85 701 701 HOH HOH . C 3 HOH A 86 702 702 HOH HOH . C 3 HOH A 87 703 703 HOH HOH . C 3 HOH A 88 705 705 HOH HOH . C 3 HOH A 89 706 706 HOH HOH . C 3 HOH A 90 707 707 HOH HOH . C 3 HOH A 91 708 708 HOH HOH . C 3 HOH A 92 709 709 HOH HOH . C 3 HOH A 93 710 710 HOH HOH . C 3 HOH A 94 711 711 HOH HOH . C 3 HOH A 95 712 712 HOH HOH . C 3 HOH A 96 713 713 HOH HOH . C 3 HOH A 97 714 714 HOH HOH . C 3 HOH A 98 716 716 HOH HOH . C 3 HOH A 99 717 717 HOH HOH . C 3 HOH A 100 719 719 HOH HOH . C 3 HOH A 101 720 720 HOH HOH . C 3 HOH A 102 722 722 HOH HOH . C 3 HOH A 103 724 724 HOH HOH . C 3 HOH A 104 725 725 HOH HOH . C 3 HOH A 105 726 726 HOH HOH . C 3 HOH A 106 727 727 HOH HOH . C 3 HOH A 107 728 728 HOH HOH . C 3 HOH A 108 729 729 HOH HOH . C 3 HOH A 109 730 730 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . B 2 25.073 31.353 -12.907 1 15.88 ? PA FAD 500 A 1 HETATM 2 O O1A FAD . . . B 2 26.449 31.25 -13.483 1 29.57 ? O1A FAD 500 A 1 HETATM 3 O O2A FAD . . . B 2 24.528 30.197 -12.162 1 28.54 ? O2A FAD 500 A 1 HETATM 4 O O5B FAD . . . B 2 24.006 31.535 -14.11 1 19.79 ? O5B FAD 500 A 1 HETATM 5 C C5B FAD . . . B 2 24.132 32.482 -15.155 1 18.21 ? C5B FAD 500 A 1 HETATM 6 C C4B FAD . . . B 2 22.974 32.384 -16.1 1 29.05 ? C4B FAD 500 A 1 HETATM 7 O O4B FAD . . . B 2 22.935 33.503 -16.998 1 31.62 ? O4B FAD 500 A 1 HETATM 8 C C3B FAD . . . B 2 23.014 31.117 -16.925 1 29.23 ? C3B FAD 500 A 1 HETATM 9 O O3B FAD . . . B 2 21.655 30.678 -17.034 1 26.53 ? O3B FAD 500 A 1 HETATM 10 C C2B FAD . . . B 2 23.627 31.622 -18.228 1 29.28 ? C2B FAD 500 A 1 HETATM 11 O O2B FAD . . . B 2 23.246 30.805 -19.35 1 27.41 ? O2B FAD 500 A 1 HETATM 12 C C1B FAD . . . B 2 23.009 33.001 -18.331 1 29.17 ? C1B FAD 500 A 1 HETATM 13 N N9A FAD . . . B 2 23.75 33.925 -19.218 1 12.09 ? N9A FAD 500 A 1 HETATM 14 C C8A FAD . . . B 2 25.11 34.125 -19.364 1 10.47 ? C8A FAD 500 A 1 HETATM 15 N N7A FAD . . . B 2 25.424 34.995 -20.308 1 11.2 ? N7A FAD 500 A 1 HETATM 16 C C5A FAD . . . B 2 24.178 35.393 -20.812 1 26.44 ? C5A FAD 500 A 1 HETATM 17 C C6A FAD . . . B 2 23.814 36.275 -21.858 1 28.1 ? C6A FAD 500 A 1 HETATM 18 N N6A FAD . . . B 2 24.708 37.008 -22.553 1 8.71 ? N6A FAD 500 A 1 HETATM 19 N N1A FAD . . . B 2 22.488 36.378 -22.111 1 26.92 ? N1A FAD 500 A 1 HETATM 20 C C2A FAD . . . B 2 21.593 35.691 -21.399 1 27.15 ? C2A FAD 500 A 1 HETATM 21 N N3A FAD . . . B 2 21.809 34.855 -20.406 1 28.07 ? N3A FAD 500 A 1 HETATM 22 C C4A FAD . . . B 2 23.152 34.747 -20.157 1 28.02 ? C4A FAD 500 A 1 HETATM 23 N N1 FAD . . . B 2 26.872 27.206 -4.915 1 36.96 ? N1 FAD 500 A 1 HETATM 24 C C2 FAD . . . B 2 26.442 26.919 -3.667 1 37.35 ? C2 FAD 500 A 1 HETATM 25 O O2 FAD . . . B 2 26.036 27.825 -2.925 1 36.8 ? O2 FAD 500 A 1 HETATM 26 N N3 FAD . . . B 2 26.524 25.618 -3.244 1 37.16 ? N3 FAD 500 A 1 HETATM 27 C C4 FAD . . . B 2 27.023 24.561 -3.982 1 40.14 ? C4 FAD 500 A 1 HETATM 28 O O4 FAD . . . B 2 27.121 23.449 -3.445 1 39.61 ? O4 FAD 500 A 1 HETATM 29 C C4X FAD . . . B 2 27.462 24.92 -5.296 1 39.82 ? C4X FAD 500 A 1 HETATM 30 N N5 FAD . . . B 2 27.994 23.908 -6.175 1 43 ? N5 FAD 500 A 1 HETATM 31 C C5X FAD . . . B 2 28.969 24.37 -7.151 1 42.79 ? C5X FAD 500 A 1 HETATM 32 C C6 FAD . . . B 2 30.024 23.552 -7.601 1 43.52 ? C6 FAD 500 A 1 HETATM 33 C C7 FAD . . . B 2 31.041 24.091 -8.423 1 41.52 ? C7 FAD 500 A 1 HETATM 34 C C7M FAD . . . B 2 32.177 23.183 -8.856 1 41.41 ? C7M FAD 500 A 1 HETATM 35 C C8 FAD . . . B 2 31.008 25.469 -8.812 1 47.63 ? C8 FAD 500 A 1 HETATM 36 C C8M FAD . . . B 2 32.124 26.147 -9.583 1 46.83 ? C8M FAD 500 A 1 HETATM 37 C C9 FAD . . . B 2 29.934 26.255 -8.363 1 47.31 ? C9 FAD 500 A 1 HETATM 38 C C9A FAD . . . B 2 28.913 25.736 -7.536 1 59.43 ? C9A FAD 500 A 1 HETATM 39 N N10 FAD . . . B 2 27.906 26.612 -6.979 1 28.98 ? N10 FAD 500 A 1 HETATM 40 C C10 FAD . . . B 2 27.385 26.23 -5.743 1 39.29 ? C10 FAD 500 A 1 HETATM 41 C C1' FAD . . . B 2 27.272 27.611 -7.858 1 27.21 ? C1' FAD 500 A 1 HETATM 42 C C2' FAD . . . B 2 27.984 28.915 -7.662 1 39.1 ? C2' FAD 500 A 1 HETATM 43 O O2' FAD . . . B 2 28.071 29.179 -6.26 1 21.32 ? O2' FAD 500 A 1 HETATM 44 C C3' FAD . . . B 2 27.586 30.142 -8.465 1 38.32 ? C3' FAD 500 A 1 HETATM 45 O O3' FAD . . . B 2 28.285 31.225 -7.834 1 19.25 ? O3' FAD 500 A 1 HETATM 46 C C4' FAD . . . B 2 26.074 30.435 -8.602 1 36.05 ? C4' FAD 500 A 1 HETATM 47 O O4' FAD . . . B 2 25.438 29.522 -9.499 1 18.87 ? O4' FAD 500 A 1 HETATM 48 C C5' FAD . . . B 2 25.905 31.825 -9.199 1 12.98 ? C5' FAD 500 A 1 HETATM 49 O O5' FAD . . . B 2 24.565 32.189 -9.489 1 13.59 ? O5' FAD 500 A 1 HETATM 50 P P FAD . . . B 2 24.217 33.199 -10.673 1 13.51 ? P FAD 500 A 1 HETATM 51 O O1P FAD . . . B 2 22.754 33.213 -10.787 1 4.19 ? O1P FAD 500 A 1 HETATM 52 O O2P FAD . . . B 2 24.829 34.504 -10.361 1 3.27 ? O2P FAD 500 A 1 HETATM 53 O O3P FAD . . . B 2 24.968 32.706 -12.022 1 14.67 ? O3P FAD 500 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 53 #