data_1CM0 # _model_server_result.job_id -ouGDmvx63VisjiKtX8eow _model_server_result.datetime_utc '2024-11-14 18:39:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1cm0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":701}' # _entry.id 1CM0 # _exptl.entry_id 1CM0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 767.534 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1CM0 _cell.length_a 97 _cell.length_b 97 _cell.length_c 77.85 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CM0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 64' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A COA sing 70 n y N1A C6A COA doub 71 n y C2A N3A COA doub 72 n y C2A H2A COA sing 73 n n N3A C4A COA sing 74 n y C4A C5A COA doub 75 n y C4A N9A COA sing 76 n y C5A C6A COA sing 77 n y C5A N7A COA sing 78 n y C6A N6A COA sing 79 n n N6A H61A COA sing 80 n n N6A H62A COA sing 81 n n N7A C8A COA doub 82 n y C8A N9A COA sing 83 n y C8A H8A COA sing 84 n n N9A C1B COA sing 85 n n C1B C2B COA sing 86 n n C1B O4B COA sing 87 n n C1B H1B COA sing 88 n n C2B O2B COA sing 89 n n C2B C3B COA sing 90 n n C2B H2B COA sing 91 n n O2B HO2A COA sing 92 n n C3B O3B COA sing 93 n n C3B C4B COA sing 94 n n C3B H3B COA sing 95 n n O3B P3B COA sing 96 n n P3B O7A COA doub 97 n n P3B O8A COA sing 98 n n P3B O9A COA sing 99 n n O8A HOA8 COA sing 100 n n O9A HOA9 COA sing 101 n n C4B O4B COA sing 102 n n C4B C5B COA sing 103 n n C4B H4B COA sing 104 n n C5B O5B COA sing 105 n n C5B H51A COA sing 106 n n C5B H52A COA sing 107 n n O5B P1A COA sing 108 n n P1A O1A COA doub 109 n n P1A O2A COA sing 110 n n P1A O3A COA sing 111 n n O2A HOA2 COA sing 112 n n O3A P2A COA sing 113 n n P2A O4A COA doub 114 n n P2A O5A COA sing 115 n n P2A O6A COA sing 116 n n O5A HOA5 COA sing 117 n n O6A CCP COA sing 118 n n CBP CCP COA sing 119 n n CBP CDP COA sing 120 n n CBP CEP COA sing 121 n n CBP CAP COA sing 122 n n CCP H121 COA sing 123 n n CCP H122 COA sing 124 n n CDP H131 COA sing 125 n n CDP H132 COA sing 126 n n CDP H133 COA sing 127 n n CEP H141 COA sing 128 n n CEP H142 COA sing 129 n n CEP H143 COA sing 130 n n CAP OAP COA sing 131 n n CAP C9P COA sing 132 n n CAP H10 COA sing 133 n n OAP HO1 COA sing 134 n n C9P O9P COA doub 135 n n C9P N8P COA sing 136 n n N8P C7P COA sing 137 n n N8P HN8 COA sing 138 n n C7P C6P COA sing 139 n n C7P H71 COA sing 140 n n C7P H72 COA sing 141 n n C6P C5P COA sing 142 n n C6P H61 COA sing 143 n n C6P H62 COA sing 144 n n C5P O5P COA doub 145 n n C5P N4P COA sing 146 n n N4P C3P COA sing 147 n n N4P HN4 COA sing 148 n n C3P C2P COA sing 149 n n C3P H31 COA sing 150 n n C3P H32 COA sing 151 n n C2P S1P COA sing 152 n n C2P H21 COA sing 153 n n C2P H22 COA sing 154 n n S1P HS1 COA sing 155 n n # _atom_sites.entry_id 1CM0 _atom_sites.fract_transf_matrix[1][1] 0.010309 _atom_sites.fract_transf_matrix[1][2] 0.005952 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011904 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012845 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 COA B 1 700 1 COA COA . D 2 COA A 1 701 1 COA COA . E 3 HOH B 1 6 6 HOH HOH . E 3 HOH B 2 26 26 HOH HOH . E 3 HOH B 3 29 29 HOH HOH . E 3 HOH B 4 34 34 HOH HOH . E 3 HOH B 5 35 35 HOH HOH . E 3 HOH B 6 36 36 HOH HOH . E 3 HOH B 7 38 38 HOH HOH . E 3 HOH B 8 39 39 HOH HOH . E 3 HOH B 9 40 40 HOH HOH . E 3 HOH B 10 42 42 HOH HOH . E 3 HOH B 11 44 44 HOH HOH . E 3 HOH B 12 47 47 HOH HOH . E 3 HOH B 13 49 49 HOH HOH . E 3 HOH B 14 52 52 HOH HOH . E 3 HOH B 15 53 53 HOH HOH . E 3 HOH B 16 54 54 HOH HOH . E 3 HOH B 17 61 61 HOH HOH . E 3 HOH B 18 64 64 HOH HOH . E 3 HOH B 19 66 66 HOH HOH . E 3 HOH B 20 67 67 HOH HOH . E 3 HOH B 21 68 68 HOH HOH . E 3 HOH B 22 72 72 HOH HOH . E 3 HOH B 23 73 73 HOH HOH . E 3 HOH B 24 74 74 HOH HOH . E 3 HOH B 25 76 76 HOH HOH . E 3 HOH B 26 77 77 HOH HOH . E 3 HOH B 27 80 80 HOH HOH . E 3 HOH B 28 82 82 HOH HOH . E 3 HOH B 29 83 83 HOH HOH . E 3 HOH B 30 91 91 HOH HOH . E 3 HOH B 31 92 92 HOH HOH . E 3 HOH B 32 94 94 HOH HOH . E 3 HOH B 33 95 95 HOH HOH . E 3 HOH B 34 96 96 HOH HOH . E 3 HOH B 35 97 97 HOH HOH . E 3 HOH B 36 99 99 HOH HOH . E 3 HOH B 37 100 100 HOH HOH . E 3 HOH B 38 103 103 HOH HOH . E 3 HOH B 39 106 106 HOH HOH . E 3 HOH B 40 108 108 HOH HOH . E 3 HOH B 41 109 109 HOH HOH . F 3 HOH A 1 1 1 HOH HOH . F 3 HOH A 2 2 2 HOH HOH . F 3 HOH A 3 3 3 HOH HOH . F 3 HOH A 4 4 4 HOH HOH . F 3 HOH A 5 5 5 HOH HOH . F 3 HOH A 6 7 7 HOH HOH . F 3 HOH A 7 8 8 HOH HOH . F 3 HOH A 8 9 9 HOH HOH . F 3 HOH A 9 10 10 HOH HOH . F 3 HOH A 10 11 11 HOH HOH . F 3 HOH A 11 12 12 HOH HOH . F 3 HOH A 12 13 13 HOH HOH . F 3 HOH A 13 14 14 HOH HOH . F 3 HOH A 14 15 15 HOH HOH . F 3 HOH A 15 16 16 HOH HOH . F 3 HOH A 16 17 17 HOH HOH . F 3 HOH A 17 18 18 HOH HOH . F 3 HOH A 18 19 19 HOH HOH . F 3 HOH A 19 20 20 HOH HOH . F 3 HOH A 20 21 21 HOH HOH . F 3 HOH A 21 22 22 HOH HOH . F 3 HOH A 22 23 23 HOH HOH . F 3 HOH A 23 24 24 HOH HOH . F 3 HOH A 24 25 25 HOH HOH . F 3 HOH A 25 27 27 HOH HOH . F 3 HOH A 26 28 28 HOH HOH . F 3 HOH A 27 30 30 HOH HOH . F 3 HOH A 28 31 31 HOH HOH . F 3 HOH A 29 32 32 HOH HOH . F 3 HOH A 30 33 33 HOH HOH . F 3 HOH A 31 37 37 HOH HOH . F 3 HOH A 32 41 41 HOH HOH . F 3 HOH A 33 43 43 HOH HOH . F 3 HOH A 34 45 45 HOH HOH . F 3 HOH A 35 46 46 HOH HOH . F 3 HOH A 36 48 48 HOH HOH . F 3 HOH A 37 50 50 HOH HOH . F 3 HOH A 38 51 51 HOH HOH . F 3 HOH A 39 55 55 HOH HOH . F 3 HOH A 40 56 56 HOH HOH . F 3 HOH A 41 57 57 HOH HOH . F 3 HOH A 42 58 58 HOH HOH . F 3 HOH A 43 59 59 HOH HOH . F 3 HOH A 44 60 60 HOH HOH . F 3 HOH A 45 62 62 HOH HOH . F 3 HOH A 46 63 63 HOH HOH . F 3 HOH A 47 65 65 HOH HOH . F 3 HOH A 48 69 69 HOH HOH . F 3 HOH A 49 70 70 HOH HOH . F 3 HOH A 50 71 71 HOH HOH . F 3 HOH A 51 75 75 HOH HOH . F 3 HOH A 52 78 78 HOH HOH . F 3 HOH A 53 79 79 HOH HOH . F 3 HOH A 54 81 81 HOH HOH . F 3 HOH A 55 84 84 HOH HOH . F 3 HOH A 56 85 85 HOH HOH . F 3 HOH A 57 86 86 HOH HOH . F 3 HOH A 58 87 87 HOH HOH . F 3 HOH A 59 88 88 HOH HOH . F 3 HOH A 60 89 89 HOH HOH . F 3 HOH A 61 90 90 HOH HOH . F 3 HOH A 62 93 93 HOH HOH . F 3 HOH A 63 98 98 HOH HOH . F 3 HOH A 64 101 101 HOH HOH . F 3 HOH A 65 102 102 HOH HOH . F 3 HOH A 66 104 104 HOH HOH . F 3 HOH A 67 105 105 HOH HOH . F 3 HOH A 68 107 107 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . D 2 51.375 20.456 14.117 1 39.67 ? N1A COA 701 A 1 HETATM 2 C C2A COA . . . D 2 50.537 19.344 14.031 1 39.03 ? C2A COA 701 A 1 HETATM 3 N N3A COA . . . D 2 49.408 19.256 13.297 1 38.65 ? N3A COA 701 A 1 HETATM 4 C C4A COA . . . D 2 49.124 20.387 12.619 1 39.03 ? C4A COA 701 A 1 HETATM 5 C C5A COA . . . D 2 49.876 21.603 12.575 1 38.05 ? C5A COA 701 A 1 HETATM 6 C C6A COA . . . D 2 51.131 21.602 13.372 1 39.46 ? C6A COA 701 A 1 HETATM 7 N N6A COA . . . D 2 51.898 22.636 13.454 1 41.46 ? N6A COA 701 A 1 HETATM 8 N N7A COA . . . D 2 49.321 22.517 11.741 1 37.12 ? N7A COA 701 A 1 HETATM 9 C C8A COA . . . D 2 48.279 21.863 11.177 1 39.51 ? C8A COA 701 A 1 HETATM 10 N N9A COA . . . D 2 48.045 20.618 11.76 1 41.14 ? N9A COA 701 A 1 HETATM 11 C C1B COA . . . D 2 46.892 19.673 11.541 1 44.26 ? C1B COA 701 A 1 HETATM 12 C C2B COA . . . D 2 45.567 20.332 11.632 1 47.05 ? C2B COA 701 A 1 HETATM 13 O O2B COA . . . D 2 45.26 20.672 12.978 1 46.2 ? O2B COA 701 A 1 HETATM 14 C C3B COA . . . D 2 44.635 19.23 11.092 1 48.16 ? C3B COA 701 A 1 HETATM 15 O O3B COA . . . D 2 44.284 18.264 12.017 1 52.41 ? O3B COA 701 A 1 HETATM 16 P P3B COA . . . D 2 42.879 17.473 11.575 1 55.88 ? P3B COA 701 A 1 HETATM 17 O O7A COA . . . D 2 41.736 18.584 11.559 1 55.71 ? O7A COA 701 A 1 HETATM 18 O O8A COA . . . D 2 42.462 16.381 12.669 1 57.62 ? O8A COA 701 A 1 HETATM 19 O O9A COA . . . D 2 43.096 16.851 10.123 1 55.6 ? O9A COA 701 A 1 HETATM 20 C C4B COA . . . D 2 45.447 18.763 9.839 1 46.4 ? C4B COA 701 A 1 HETATM 21 O O4B COA . . . D 2 46.881 19.126 10.178 1 45.96 ? O4B COA 701 A 1 HETATM 22 C C5B COA . . . D 2 44.992 19.275 8.471 1 44.38 ? C5B COA 701 A 1 HETATM 23 O O5B COA . . . D 2 45.646 20.557 8.226 1 37.47 ? O5B COA 701 A 1 HETATM 24 P P1A COA . . . D 2 45.15 21.498 6.982 1 33.95 ? P1A COA 701 A 1 HETATM 25 O O1A COA . . . D 2 43.776 22.036 7.255 1 33.96 ? O1A COA 701 A 1 HETATM 26 O O2A COA . . . D 2 45.343 20.881 5.626 1 33.38 ? O2A COA 701 A 1 HETATM 27 O O3A COA . . . D 2 46.104 22.647 7.149 1 33.04 ? O3A COA 701 A 1 HETATM 28 P P2A COA . . . D 2 45.949 24.251 7.156 1 27.93 ? P2A COA 701 A 1 HETATM 29 O O4A COA . . . D 2 45.625 24.781 5.795 1 28.23 ? O4A COA 701 A 1 HETATM 30 O O5A COA . . . D 2 44.962 24.789 8.164 1 27.55 ? O5A COA 701 A 1 HETATM 31 O O6A COA . . . D 2 47.44 24.625 7.708 1 28.9 ? O6A COA 701 A 1 HETATM 32 C CBP COA . . . D 2 49.788 25.16 7.65 1 27.83 ? CBP COA 701 A 1 HETATM 33 C CCP COA . . . D 2 48.629 24.29 7.072 1 27.07 ? CCP COA 701 A 1 HETATM 34 C CDP COA . . . D 2 50.786 24.332 8.543 1 25.18 ? CDP COA 701 A 1 HETATM 35 C CEP COA . . . D 2 50.445 25.588 6.319 1 26.47 ? CEP COA 701 A 1 HETATM 36 C CAP COA . . . D 2 49.204 26.381 8.534 1 28 ? CAP COA 701 A 1 HETATM 37 O OAP COA . . . D 2 48.817 25.938 9.881 1 28.49 ? OAP COA 701 A 1 HETATM 38 C C9P COA . . . D 2 50.219 27.506 8.687 1 29.04 ? C9P COA 701 A 1 HETATM 39 O O9P COA . . . D 2 50.317 28.481 7.752 1 25.44 ? O9P COA 701 A 1 HETATM 40 N N8P COA . . . D 2 50.976 27.428 9.758 1 31.56 ? N8P COA 701 A 1 HETATM 41 C C7P COA . . . D 2 51.873 28.485 10.209 1 33.51 ? C7P COA 701 A 1 HETATM 42 C C6P COA . . . D 2 53.206 28.304 9.491 1 39.19 ? C6P COA 701 A 1 HETATM 43 C C5P COA . . . D 2 53.76 26.93 9.735 1 42.85 ? C5P COA 701 A 1 HETATM 44 O O5P COA . . . D 2 53.872 26.436 10.923 1 46.48 ? O5P COA 701 A 1 HETATM 45 N N4P COA . . . D 2 54.109 26.289 8.635 1 45.22 ? N4P COA 701 A 1 HETATM 46 C C3P COA . . . D 2 54.694 24.873 8.604 1 48.95 ? C3P COA 701 A 1 HETATM 47 C C2P COA . . . D 2 54.963 24.523 7.149 1 52.34 ? C2P COA 701 A 1 HETATM 48 S S1P COA . . . D 2 53.48 23.866 6.256 1 58.15 ? S1P COA 701 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 380 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 48 #