data_1CNT # _model_server_result.job_id 2ODpQ8dvKGR914EqAVmKfw _model_server_result.datetime_utc '2024-11-26 20:12:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1cnt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":188}' # _entry.id 1CNT # _exptl.entry_id 1CNT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 173.04 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'YTTERBIUM (III) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1CNT _cell.length_a 52.95 _cell.length_b 62.09 _cell.length_c 208.89 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CNT _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,J,M 1 1 B,C,G,H,I,K,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B OE2 GLU 164 2 GLU 164 3_755 G YB YB . 3 YB 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.781 ? metalc ? metalc2 B OE1 GLU 164 2 GLU 164 3_755 G YB YB . 3 YB 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.863 ? metalc ? metalc3 B OE1 GLN 167 2 GLN 167 3_755 G YB YB . 3 YB 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc4 K O HOH . 2 HOH 931 3_755 G YB YB . 3 YB 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.06 ? metalc ? metalc5 G YB YB . 3 YB 188 1_555 H O2 SO4 . 3 SO4 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc6 G YB YB . 3 YB 188 1_555 H O1 SO4 . 3 SO4 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.932 ? # _chem_comp.formula 'Yb 3' _chem_comp.formula_weight 173.04 _chem_comp.id YB _chem_comp.mon_nstd_flag . _chem_comp.name 'YTTERBIUM (III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1CNT _atom_sites.fract_transf_matrix[1][1] 0.018886 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016106 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004787 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 SO4 1 1 190 190 SO4 SO4 . F 2 SO4 1 1 191 191 SO4 SO4 . G 3 YB 3 1 188 188 YB YB . H 2 SO4 3 1 189 189 SO4 SO4 . I 2 SO4 3 1 192 192 SO4 SO4 . J 4 HOH 1 1 192 192 HOH HOH . J 4 HOH 1 2 194 194 HOH HOH . J 4 HOH 1 3 195 195 HOH HOH . J 4 HOH 1 4 196 196 HOH HOH . J 4 HOH 1 5 197 197 HOH HOH . J 4 HOH 1 6 199 199 HOH HOH . J 4 HOH 1 7 800 800 HOH HOH . J 4 HOH 1 8 801 801 HOH HOH . J 4 HOH 1 9 823 823 HOH HOH . J 4 HOH 1 10 828 828 HOH HOH . J 4 HOH 1 11 830 830 HOH HOH . J 4 HOH 1 12 831 831 HOH HOH . J 4 HOH 1 13 833 833 HOH HOH . J 4 HOH 1 14 834 834 HOH HOH . J 4 HOH 1 15 835 835 HOH HOH . J 4 HOH 1 16 836 836 HOH HOH . J 4 HOH 1 17 837 837 HOH HOH . J 4 HOH 1 18 838 838 HOH HOH . J 4 HOH 1 19 839 839 HOH HOH . J 4 HOH 1 20 840 840 HOH HOH . J 4 HOH 1 21 841 841 HOH HOH . J 4 HOH 1 22 867 867 HOH HOH . J 4 HOH 1 23 868 868 HOH HOH . J 4 HOH 1 24 869 869 HOH HOH . J 4 HOH 1 25 870 870 HOH HOH . J 4 HOH 1 26 871 871 HOH HOH . J 4 HOH 1 27 872 872 HOH HOH . J 4 HOH 1 28 875 875 HOH HOH . J 4 HOH 1 29 876 876 HOH HOH . J 4 HOH 1 30 877 877 HOH HOH . J 4 HOH 1 31 879 879 HOH HOH . J 4 HOH 1 32 882 882 HOH HOH . J 4 HOH 1 33 884 884 HOH HOH . J 4 HOH 1 34 893 893 HOH HOH . J 4 HOH 1 35 894 894 HOH HOH . J 4 HOH 1 36 895 895 HOH HOH . J 4 HOH 1 37 901 901 HOH HOH . J 4 HOH 1 38 905 905 HOH HOH . J 4 HOH 1 39 908 908 HOH HOH . J 4 HOH 1 40 909 909 HOH HOH . J 4 HOH 1 41 923 923 HOH HOH . J 4 HOH 1 42 927 927 HOH HOH . J 4 HOH 1 43 937 937 HOH HOH . J 4 HOH 1 44 938 938 HOH HOH . J 4 HOH 1 45 939 939 HOH HOH . J 4 HOH 1 46 940 940 HOH HOH . J 4 HOH 1 47 967 967 HOH HOH . J 4 HOH 1 48 990 990 HOH HOH . J 4 HOH 1 49 994 994 HOH HOH . K 4 HOH 2 1 806 806 HOH HOH . K 4 HOH 2 2 807 807 HOH HOH . K 4 HOH 2 3 809 809 HOH HOH . K 4 HOH 2 4 811 811 HOH HOH . K 4 HOH 2 5 843 843 HOH HOH . K 4 HOH 2 6 844 844 HOH HOH . K 4 HOH 2 7 845 845 HOH HOH . K 4 HOH 2 8 846 846 HOH HOH . K 4 HOH 2 9 847 847 HOH HOH . K 4 HOH 2 10 848 848 HOH HOH . K 4 HOH 2 11 854 854 HOH HOH . K 4 HOH 2 12 916 916 HOH HOH . K 4 HOH 2 13 917 917 HOH HOH . K 4 HOH 2 14 925 925 HOH HOH . K 4 HOH 2 15 930 930 HOH HOH . K 4 HOH 2 16 931 931 HOH HOH . K 4 HOH 2 17 932 932 HOH HOH . K 4 HOH 2 18 933 933 HOH HOH . K 4 HOH 2 19 934 934 HOH HOH . K 4 HOH 2 20 935 935 HOH HOH . K 4 HOH 2 21 941 941 HOH HOH . K 4 HOH 2 22 942 942 HOH HOH . K 4 HOH 2 23 970 970 HOH HOH . K 4 HOH 2 24 971 971 HOH HOH . K 4 HOH 2 25 972 972 HOH HOH . K 4 HOH 2 26 976 976 HOH HOH . K 4 HOH 2 27 998 998 HOH HOH . K 4 HOH 2 28 999 999 HOH HOH . L 4 HOH 3 1 812 812 HOH HOH . L 4 HOH 3 2 814 814 HOH HOH . L 4 HOH 3 3 815 815 HOH HOH . L 4 HOH 3 4 816 816 HOH HOH . L 4 HOH 3 5 817 817 HOH HOH . L 4 HOH 3 6 842 842 HOH HOH . L 4 HOH 3 7 853 853 HOH HOH . L 4 HOH 3 8 928 928 HOH HOH . L 4 HOH 3 9 929 929 HOH HOH . L 4 HOH 3 10 936 936 HOH HOH . L 4 HOH 3 11 946 946 HOH HOH . L 4 HOH 3 12 947 947 HOH HOH . L 4 HOH 3 13 948 948 HOH HOH . L 4 HOH 3 14 950 950 HOH HOH . L 4 HOH 3 15 952 952 HOH HOH . L 4 HOH 3 16 953 953 HOH HOH . L 4 HOH 3 17 954 954 HOH HOH . L 4 HOH 3 18 955 955 HOH HOH . L 4 HOH 3 19 956 956 HOH HOH . L 4 HOH 3 20 957 957 HOH HOH . L 4 HOH 3 21 958 958 HOH HOH . L 4 HOH 3 22 959 959 HOH HOH . L 4 HOH 3 23 960 960 HOH HOH . L 4 HOH 3 24 961 961 HOH HOH . L 4 HOH 3 25 962 962 HOH HOH . L 4 HOH 3 26 963 963 HOH HOH . L 4 HOH 3 27 964 964 HOH HOH . L 4 HOH 3 28 965 965 HOH HOH . L 4 HOH 3 29 966 966 HOH HOH . L 4 HOH 3 30 968 968 HOH HOH . L 4 HOH 3 31 973 973 HOH HOH . L 4 HOH 3 32 974 974 HOH HOH . L 4 HOH 3 33 975 975 HOH HOH . L 4 HOH 3 34 977 977 HOH HOH . L 4 HOH 3 35 978 978 HOH HOH . L 4 HOH 3 36 979 979 HOH HOH . L 4 HOH 3 37 980 980 HOH HOH . L 4 HOH 3 38 981 981 HOH HOH . L 4 HOH 3 39 982 982 HOH HOH . L 4 HOH 3 40 996 996 HOH HOH . M 4 HOH 4 1 193 193 HOH HOH . M 4 HOH 4 2 813 813 HOH HOH . M 4 HOH 4 3 820 820 HOH HOH . M 4 HOH 4 4 821 821 HOH HOH . M 4 HOH 4 5 824 824 HOH HOH . M 4 HOH 4 6 825 825 HOH HOH . M 4 HOH 4 7 826 826 HOH HOH . M 4 HOH 4 8 827 827 HOH HOH . M 4 HOH 4 9 829 829 HOH HOH . M 4 HOH 4 10 832 832 HOH HOH . M 4 HOH 4 11 850 850 HOH HOH . M 4 HOH 4 12 851 851 HOH HOH . M 4 HOH 4 13 852 852 HOH HOH . M 4 HOH 4 14 855 855 HOH HOH . M 4 HOH 4 15 856 856 HOH HOH . M 4 HOH 4 16 859 859 HOH HOH . M 4 HOH 4 17 860 860 HOH HOH . M 4 HOH 4 18 861 861 HOH HOH . M 4 HOH 4 19 862 862 HOH HOH . M 4 HOH 4 20 910 910 HOH HOH . M 4 HOH 4 21 926 926 HOH HOH . M 4 HOH 4 22 943 943 HOH HOH . M 4 HOH 4 23 944 944 HOH HOH . M 4 HOH 4 24 983 983 HOH HOH . M 4 HOH 4 25 984 984 HOH HOH . M 4 HOH 4 26 985 985 HOH HOH . M 4 HOH 4 27 986 986 HOH HOH . M 4 HOH 4 28 987 987 HOH HOH . M 4 HOH 4 29 988 988 HOH HOH . M 4 HOH 4 30 989 989 HOH HOH . M 4 HOH 4 31 995 995 HOH HOH . M 4 HOH 4 32 997 997 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol YB _atom_site.label_atom_id YB _atom_site.label_comp_id YB _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 3 _atom_site.Cartn_x 47.746 _atom_site.Cartn_y 36.815 _atom_site.Cartn_z 71.097 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 46.94 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id YB _atom_site.auth_comp_id YB _atom_site.auth_seq_id 188 _atom_site.auth_asym_id 3 _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #