data_1CPI # _model_server_result.job_id nF6Yydg-DxHLJCXcfVH5VA _model_server_result.datetime_utc '2024-11-10 01:28:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1cpi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":502}' # _entry.id 1CPI # _exptl.entry_id 1CPI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1CPI _cell.length_a 51.3 _cell.length_b 58.8 _cell.length_c 62.3 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CPI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ILE 66 A ILE 66 1_555 A N ABA 67 A ABA 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale2 A C ABA 67 A ABA 67 1_555 A N GLY 68 A GLY 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale3 A C GLY 94 A GLY 94 1_555 A N ABA 95 A ABA 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 A C ABA 95 A ABA 95 1_555 A N THR 96 A THR 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale5 B C ILE 66 B ILE 66 1_555 B N ABA 67 B ABA 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale6 B C ABA 67 B ABA 67 1_555 B N GLY 68 B GLY 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale7 B C GLY 94 B GLY 94 1_555 B N ABA 95 B ABA 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale8 B C ABA 95 B ABA 95 1_555 B N THR 96 B THR 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale9 C N ASN 1 C ASN 1 1_555 C C2 RTY 2 C RTY 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale10 C C6 RTY 2 C RTY 2 1_555 C N PRO 3 C PRO 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.468 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 334 n n S O2 SO4 doub 335 n n S O3 SO4 sing 336 n n S O4 SO4 sing 337 n n # _atom_sites.entry_id 1CPI _atom_sites.fract_transf_matrix[1][1] 0.019493 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017007 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016051 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 SO4 A 1 502 502 SO4 SO4 . E 3 SO4 A 1 503 503 SO4 SO4 . F 3 SO4 B 1 501 501 SO4 SO4 . G 4 HOH A 1 302 302 HOH HOH . G 4 HOH A 2 303 303 HOH HOH . G 4 HOH A 3 304 304 HOH HOH . G 4 HOH A 4 305 305 HOH HOH . G 4 HOH A 5 306 306 HOH HOH . G 4 HOH A 6 307 307 HOH HOH . G 4 HOH A 7 308 308 HOH HOH . G 4 HOH A 8 309 309 HOH HOH . G 4 HOH A 9 310 310 HOH HOH . G 4 HOH A 10 311 311 HOH HOH . G 4 HOH A 11 312 312 HOH HOH . G 4 HOH A 12 313 313 HOH HOH . G 4 HOH A 13 314 314 HOH HOH . G 4 HOH A 14 315 315 HOH HOH . G 4 HOH A 15 316 316 HOH HOH . G 4 HOH A 16 317 317 HOH HOH . G 4 HOH A 17 318 318 HOH HOH . G 4 HOH A 18 331 331 HOH HOH . G 4 HOH A 19 332 332 HOH HOH . G 4 HOH A 20 333 333 HOH HOH . G 4 HOH A 21 334 334 HOH HOH . G 4 HOH A 22 335 335 HOH HOH . G 4 HOH A 23 336 336 HOH HOH . G 4 HOH A 24 337 337 HOH HOH . G 4 HOH A 25 338 338 HOH HOH . G 4 HOH A 26 339 339 HOH HOH . G 4 HOH A 27 340 340 HOH HOH . G 4 HOH A 28 341 341 HOH HOH . G 4 HOH A 29 346 346 HOH HOH . G 4 HOH A 30 347 347 HOH HOH . G 4 HOH A 31 351 351 HOH HOH . G 4 HOH A 32 352 352 HOH HOH . G 4 HOH A 33 353 353 HOH HOH . G 4 HOH A 34 354 354 HOH HOH . G 4 HOH A 35 355 355 HOH HOH . G 4 HOH A 36 356 356 HOH HOH . G 4 HOH A 37 357 357 HOH HOH . G 4 HOH A 38 362 362 HOH HOH . G 4 HOH A 39 363 363 HOH HOH . G 4 HOH A 40 364 364 HOH HOH . G 4 HOH A 41 367 367 HOH HOH . G 4 HOH A 42 369 369 HOH HOH . G 4 HOH A 43 370 370 HOH HOH . G 4 HOH A 44 372 372 HOH HOH . G 4 HOH A 45 373 373 HOH HOH . G 4 HOH A 46 374 374 HOH HOH . G 4 HOH A 47 377 377 HOH HOH . G 4 HOH A 48 378 378 HOH HOH . G 4 HOH A 49 379 379 HOH HOH . G 4 HOH A 50 380 380 HOH HOH . G 4 HOH A 51 385 385 HOH HOH . G 4 HOH A 52 387 387 HOH HOH . G 4 HOH A 53 388 388 HOH HOH . G 4 HOH A 54 389 389 HOH HOH . G 4 HOH A 55 390 390 HOH HOH . G 4 HOH A 56 393 393 HOH HOH . G 4 HOH A 57 394 394 HOH HOH . H 4 HOH B 1 319 319 HOH HOH . H 4 HOH B 2 320 320 HOH HOH . H 4 HOH B 3 321 321 HOH HOH . H 4 HOH B 4 322 322 HOH HOH . H 4 HOH B 5 323 323 HOH HOH . H 4 HOH B 6 324 324 HOH HOH . H 4 HOH B 7 325 325 HOH HOH . H 4 HOH B 8 326 326 HOH HOH . H 4 HOH B 9 327 327 HOH HOH . H 4 HOH B 10 328 328 HOH HOH . H 4 HOH B 11 329 329 HOH HOH . H 4 HOH B 12 330 330 HOH HOH . H 4 HOH B 13 342 342 HOH HOH . H 4 HOH B 14 343 343 HOH HOH . H 4 HOH B 15 344 344 HOH HOH . H 4 HOH B 16 345 345 HOH HOH . H 4 HOH B 17 348 348 HOH HOH . H 4 HOH B 18 349 349 HOH HOH . H 4 HOH B 19 350 350 HOH HOH . H 4 HOH B 20 358 358 HOH HOH . H 4 HOH B 21 359 359 HOH HOH . H 4 HOH B 22 360 360 HOH HOH . H 4 HOH B 23 361 361 HOH HOH . H 4 HOH B 24 365 365 HOH HOH . H 4 HOH B 25 366 366 HOH HOH . H 4 HOH B 26 368 368 HOH HOH . H 4 HOH B 27 371 371 HOH HOH . H 4 HOH B 28 375 375 HOH HOH . H 4 HOH B 29 376 376 HOH HOH . H 4 HOH B 30 381 381 HOH HOH . H 4 HOH B 31 382 382 HOH HOH . H 4 HOH B 32 383 383 HOH HOH . H 4 HOH B 33 384 384 HOH HOH . H 4 HOH B 34 386 386 HOH HOH . H 4 HOH B 35 391 391 HOH HOH . H 4 HOH B 36 392 392 HOH HOH . H 4 HOH B 37 395 395 HOH HOH . I 4 HOH C 1 301 301 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 3 -7.705 7.578 35.635 1 131.78 ? S SO4 502 A 1 HETATM 2 O O1 SO4 . . . D 3 -8.688 7.795 36.681 1 132.27 ? O1 SO4 502 A 1 HETATM 3 O O2 SO4 . . . D 3 -6.551 8.428 35.87 1 131.9 ? O2 SO4 502 A 1 HETATM 4 O O3 SO4 . . . D 3 -8.283 7.909 34.345 1 130.24 ? O3 SO4 502 A 1 HETATM 5 O O4 SO4 . . . D 3 -7.304 6.182 35.647 1 131.39 ? O4 SO4 502 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #