data_1CRH # _model_server_result.job_id HLD-WBwExpJeU2Ie2Uun2w _model_server_result.datetime_utc '2024-12-01 07:15:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1crh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":104}' # _entry.id 1CRH # _exptl.entry_id 1CRH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 618.503 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEME C' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1CRH _cell.length_a 36.46 _cell.length_b 36.46 _cell.length_c 137.82 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CRH _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 19 A CYS 14 1_555 C CAB HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.761 ? covale ? covale2 A SG CYS 22 A CYS 17 1_555 C CAC HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.793 ? covale ? covale3 A C PRO 76 A PRO 71 1_555 A N M3L 77 A M3L 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale4 A C M3L 77 A M3L 72 1_555 A N LYS 78 A LYS 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.314 ? metalc ? metalc1 A NE2 HIS 23 A HIS 18 1_555 C FE HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.953 ? metalc ? metalc2 A SD MET 85 A MET 80 1_555 C FE HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? # _chem_comp.formula 'C34 H34 Fe N4 O4' _chem_comp.formula_weight 618.503 _chem_comp.id HEC _chem_comp.mon_nstd_flag . _chem_comp.name 'HEME C' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1CRH _atom_sites.fract_transf_matrix[1][1] 0.027427 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.027427 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007256 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 117 117 SO4 SO4 . C 3 HEC A 1 104 104 HEC HEM . D 4 HOH A 1 106 106 HOH HOH . D 4 HOH A 2 107 107 HOH HOH . D 4 HOH A 3 108 108 HOH HOH . D 4 HOH A 4 109 109 HOH HOH . D 4 HOH A 5 110 110 HOH HOH . D 4 HOH A 6 112 112 HOH HOH . D 4 HOH A 7 113 113 HOH HOH . D 4 HOH A 8 114 114 HOH HOH . D 4 HOH A 9 118 118 HOH HOH . D 4 HOH A 10 119 119 HOH HOH . D 4 HOH A 11 121 121 HOH HOH . D 4 HOH A 12 122 122 HOH HOH . D 4 HOH A 13 125 125 HOH HOH . D 4 HOH A 14 126 126 HOH HOH . D 4 HOH A 15 128 128 HOH HOH . D 4 HOH A 16 129 129 HOH HOH . D 4 HOH A 17 130 130 HOH HOH . D 4 HOH A 18 132 132 HOH HOH . D 4 HOH A 19 133 133 HOH HOH . D 4 HOH A 20 134 134 HOH HOH . D 4 HOH A 21 136 136 HOH HOH . D 4 HOH A 22 138 138 HOH HOH . D 4 HOH A 23 140 140 HOH HOH . D 4 HOH A 24 141 141 HOH HOH . D 4 HOH A 25 142 142 HOH HOH . D 4 HOH A 26 150 150 HOH HOH . D 4 HOH A 27 151 151 HOH HOH . D 4 HOH A 28 152 152 HOH HOH . D 4 HOH A 29 153 153 HOH HOH . D 4 HOH A 30 154 154 HOH HOH . D 4 HOH A 31 155 155 HOH HOH . D 4 HOH A 32 157 157 HOH HOH . D 4 HOH A 33 158 158 HOH HOH . D 4 HOH A 34 160 160 HOH HOH . D 4 HOH A 35 161 161 HOH HOH . D 4 HOH A 36 162 162 HOH HOH . D 4 HOH A 37 163 163 HOH HOH . D 4 HOH A 38 167 167 HOH HOH . D 4 HOH A 39 168 168 HOH HOH . D 4 HOH A 40 169 169 HOH HOH . D 4 HOH A 41 172 172 HOH HOH . D 4 HOH A 42 175 175 HOH HOH . D 4 HOH A 43 182 182 HOH HOH . D 4 HOH A 44 184 184 HOH HOH . D 4 HOH A 45 185 185 HOH HOH . D 4 HOH A 46 188 188 HOH HOH . D 4 HOH A 47 189 189 HOH HOH . D 4 HOH A 48 195 195 HOH HOH . D 4 HOH A 49 196 196 HOH HOH . D 4 HOH A 50 197 197 HOH HOH . D 4 HOH A 51 198 198 HOH HOH . D 4 HOH A 52 200 200 HOH HOH . D 4 HOH A 53 201 201 HOH HOH . D 4 HOH A 54 220 220 HOH HOH . D 4 HOH A 55 300 300 HOH HOH . D 4 HOH A 56 301 301 HOH HOH . D 4 HOH A 57 302 302 HOH HOH . D 4 HOH A 58 303 303 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE HEC . . . C 3 2.892 21.065 13.13 1 5.4 ? FE HEC 104 A 1 HETATM 2 C CHA HEC . . . C 3 5.066 18.587 14.135 1 5.55 ? CHA HEC 104 A 1 HETATM 3 C CHB HEC . . . C 3 4.02 20.73 9.88 1 4 ? CHB HEC 104 A 1 HETATM 4 C CHC HEC . . . C 3 0.126 22.682 11.943 1 4 ? CHC HEC 104 A 1 HETATM 5 C CHD HEC . . . C 3 2.158 21.836 16.24 1 4.56 ? CHD HEC 104 A 1 HETATM 6 N NA HEC . . . C 3 4.277 19.933 12.227 1 5.02 ? NA HEC 104 A 1 HETATM 7 C C1A HEC . . . C 3 5.071 18.911 12.798 1 5.54 ? C1A HEC 104 A 1 HETATM 8 C C2A HEC . . . C 3 5.832 18.292 11.729 1 5.07 ? C2A HEC 104 A 1 HETATM 9 C C3A HEC . . . C 3 5.49 18.872 10.566 1 4 ? C3A HEC 104 A 1 HETATM 10 C C4A HEC . . . C 3 4.531 19.913 10.855 1 4 ? C4A HEC 104 A 1 HETATM 11 C CMA HEC . . . C 3 6.022 18.603 9.137 1 4 ? CMA HEC 104 A 1 HETATM 12 C CAA HEC . . . C 3 6.808 17.071 11.876 1 4.99 ? CAA HEC 104 A 1 HETATM 13 C CBA HEC . . . C 3 8.26 17.503 11.989 1 8.72 ? CBA HEC 104 A 1 HETATM 14 C CGA HEC . . . C 3 9.434 16.862 12.579 1 5.77 ? CGA HEC 104 A 1 HETATM 15 O O1A HEC . . . C 3 10.271 17.553 13.228 1 5.28 ? O1A HEC 104 A 1 HETATM 16 O O2A HEC . . . C 3 9.546 15.623 12.362 1 5.99 ? O2A HEC 104 A 1 HETATM 17 N NB HEC . . . C 3 2.187 21.541 11.281 1 4 ? NB HEC 104 A 1 HETATM 18 C C1B HEC . . . C 3 2.925 21.493 10.109 1 4 ? C1B HEC 104 A 1 HETATM 19 C C2B HEC . . . C 3 2.244 22.282 9.08 1 4.55 ? C2B HEC 104 A 1 HETATM 20 C C3B HEC . . . C 3 1.17 22.831 9.639 1 4 ? C3B HEC 104 A 1 HETATM 21 C C4B HEC . . . C 3 1.11 22.363 11.028 1 4 ? C4B HEC 104 A 1 HETATM 22 C CMB HEC . . . C 3 2.82 22.51 7.664 1 5.31 ? CMB HEC 104 A 1 HETATM 23 C CAB HEC . . . C 3 0.12 23.746 9.033 1 4 ? CAB HEC 104 A 1 HETATM 24 C CBB HEC . . . C 3 -0.868 23.075 8.066 1 5.75 ? CBB HEC 104 A 1 HETATM 25 N NC HEC . . . C 3 1.42 22.077 13.951 1 4 ? NC HEC 104 A 1 HETATM 26 C C1C HEC . . . C 3 0.363 22.728 13.319 1 4 ? C1C HEC 104 A 1 HETATM 27 C C2C HEC . . . C 3 -0.424 23.411 14.299 1 4.24 ? C2C HEC 104 A 1 HETATM 28 C C3C HEC . . . C 3 0.162 23.228 15.495 1 6.25 ? C3C HEC 104 A 1 HETATM 29 C C4C HEC . . . C 3 1.323 22.366 15.294 1 4.85 ? C4C HEC 104 A 1 HETATM 30 C CMC HEC . . . C 3 -1.676 24.29 14.03 1 4 ? CMC HEC 104 A 1 HETATM 31 C CAC HEC . . . C 3 -0.254 23.795 16.874 1 6.18 ? CAC HEC 104 A 1 HETATM 32 C CBC HEC . . . C 3 -1.711 23.831 17.289 1 9.66 ? CBC HEC 104 A 1 HETATM 33 N ND HEC . . . C 3 3.498 20.315 14.902 1 6.61 ? ND HEC 104 A 1 HETATM 34 C C1D HEC . . . C 3 3.025 20.759 16.131 1 5.94 ? C1D HEC 104 A 1 HETATM 35 C C2D HEC . . . C 3 3.66 19.978 17.134 1 7.16 ? C2D HEC 104 A 1 HETATM 36 C C3D HEC . . . C 3 4.474 19.09 16.561 1 7.18 ? C3D HEC 104 A 1 HETATM 37 C C4D HEC . . . C 3 4.359 19.252 15.132 1 8.06 ? C4D HEC 104 A 1 HETATM 38 C CMD HEC . . . C 3 3.392 20.113 18.658 1 9.39 ? CMD HEC 104 A 1 HETATM 39 C CAD HEC . . . C 3 5.321 18.028 17.285 1 7.46 ? CAD HEC 104 A 1 HETATM 40 C CBD HEC . . . C 3 5.027 16.584 17.119 1 8.11 ? CBD HEC 104 A 1 HETATM 41 C CGD HEC . . . C 3 5.242 15.599 18.203 1 7.52 ? CGD HEC 104 A 1 HETATM 42 O O1D HEC . . . C 3 6.189 15.809 19.013 1 10.28 ? O1D HEC 104 A 1 HETATM 43 O O2D HEC . . . C 3 4.483 14.616 18.2 1 7.16 ? O2D HEC 104 A 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 43 #