data_1CRI # _model_server_result.job_id 5IvpeCs3M5mUpt8k-7KyOA _model_server_result.datetime_utc '2024-11-24 03:56:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1cri # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":104}' # _entry.id 1CRI # _exptl.entry_id 1CRI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 616.487 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PROTOPORPHYRIN IX CONTAINING FE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1CRI _cell.length_a 36.52 _cell.length_b 36.52 _cell.length_c 139.12 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CRI _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C PRO 76 A PRO 71 1_555 A N M3L 77 A M3L 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.362 ? covale ? covale2 A C M3L 77 A M3L 72 1_555 A N LYS 78 A LYS 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.306 ? metalc ? metalc1 A NE2 HIS 23 A HIS 18 1_555 C FE HEM . A HEM 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc2 A SD MET 85 A MET 80 1_555 C FE HEM . A HEM 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.549 ? # _chem_comp.formula 'C34 H32 Fe N4 O4' _chem_comp.formula_weight 616.487 _chem_comp.id HEM _chem_comp.mon_nstd_flag . _chem_comp.name 'PROTOPORPHYRIN IX CONTAINING FE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEME # _atom_sites.entry_id 1CRI _atom_sites.fract_transf_matrix[1][1] 0.027382 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.027382 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007188 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 117 117 SO4 SO4 . C 3 HEM A 1 104 104 HEM HEM . D 4 HOH A 1 109 109 HOH HOH . D 4 HOH A 2 110 110 HOH HOH . D 4 HOH A 3 113 113 HOH HOH . D 4 HOH A 4 121 121 HOH HOH . D 4 HOH A 5 122 122 HOH HOH . D 4 HOH A 6 128 128 HOH HOH . D 4 HOH A 7 129 129 HOH HOH . D 4 HOH A 8 133 133 HOH HOH . D 4 HOH A 9 136 136 HOH HOH . D 4 HOH A 10 142 142 HOH HOH . D 4 HOH A 11 149 149 HOH HOH . D 4 HOH A 12 150 150 HOH HOH . D 4 HOH A 13 153 153 HOH HOH . D 4 HOH A 14 154 154 HOH HOH . D 4 HOH A 15 156 156 HOH HOH . D 4 HOH A 16 158 158 HOH HOH . D 4 HOH A 17 160 160 HOH HOH . D 4 HOH A 18 167 167 HOH HOH . D 4 HOH A 19 168 168 HOH HOH . D 4 HOH A 20 169 169 HOH HOH . D 4 HOH A 21 174 174 HOH HOH . D 4 HOH A 22 195 195 HOH HOH . D 4 HOH A 23 196 196 HOH HOH . D 4 HOH A 24 197 197 HOH HOH . D 4 HOH A 25 204 204 HOH HOH . D 4 HOH A 26 205 205 HOH HOH . D 4 HOH A 27 208 208 HOH HOH . D 4 HOH A 28 209 209 HOH HOH . D 4 HOH A 29 214 214 HOH HOH . D 4 HOH A 30 215 215 HOH HOH . D 4 HOH A 31 300 300 HOH HOH . D 4 HOH A 32 301 301 HOH HOH . D 4 HOH A 33 302 302 HOH HOH . D 4 HOH A 34 303 303 HOH HOH . D 4 HOH A 35 304 304 HOH HOH . D 4 HOH A 36 305 305 HOH HOH . D 4 HOH A 37 306 306 HOH HOH . D 4 HOH A 38 307 307 HOH HOH . D 4 HOH A 39 308 308 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA HEM . . . C 3 4.927 18.721 14.378 1 11.18 ? CHA HEM 104 A 1 HETATM 2 C CHB HEM . . . C 3 3.912 20.745 10.09 1 9.95 ? CHB HEM 104 A 1 HETATM 3 C CHC HEM . . . C 3 -0.054 22.725 12.055 1 11.41 ? CHC HEM 104 A 1 HETATM 4 C CHD HEM . . . C 3 1.715 21.71 16.466 1 14.39 ? CHD HEM 104 A 1 HETATM 5 C C1A HEM . . . C 3 4.918 19.052 13.037 1 9.28 ? C1A HEM 104 A 1 HETATM 6 C C2A HEM . . . C 3 5.779 18.414 12.033 1 9.22 ? C2A HEM 104 A 1 HETATM 7 C C3A HEM . . . C 3 5.438 18.888 10.838 1 8.48 ? C3A HEM 104 A 1 HETATM 8 C C4A HEM . . . C 3 4.39 19.88 11.044 1 8.26 ? C4A HEM 104 A 1 HETATM 9 C CMA HEM . . . C 3 6.058 18.685 9.452 1 9.66 ? CMA HEM 104 A 1 HETATM 10 C CAA HEM . . . C 3 6.792 17.338 12.429 1 9 ? CAA HEM 104 A 1 HETATM 11 C CBA HEM . . . C 3 8.178 17.935 12.705 1 10.5 ? CBA HEM 104 A 1 HETATM 12 C CGA HEM . . . C 3 9.439 17.093 12.691 1 10.54 ? CGA HEM 104 A 1 HETATM 13 O O1A HEM . . . C 3 10.548 17.764 12.875 1 10.84 ? O1A HEM 104 A 1 HETATM 14 O O2A HEM . . . C 3 9.279 15.88 12.448 1 9.51 ? O2A HEM 104 A 1 HETATM 15 C C1B HEM . . . C 3 2.812 21.566 10.31 1 12.45 ? C1B HEM 104 A 1 HETATM 16 C C2B HEM . . . C 3 2.111 22.31 9.271 1 12.61 ? C2B HEM 104 A 1 HETATM 17 C C3B HEM . . . C 3 0.984 22.763 9.786 1 11 ? C3B HEM 104 A 1 HETATM 18 C C4B HEM . . . C 3 0.96 22.383 11.177 1 10.21 ? C4B HEM 104 A 1 HETATM 19 C CMB HEM . . . C 3 2.699 22.391 7.845 1 11.8 ? CMB HEM 104 A 1 HETATM 20 C CAB HEM . . . C 3 -0.179 23.616 9.208 1 12.46 ? CAB HEM 104 A 1 HETATM 21 C CBB HEM . . . C 3 -1.113 22.787 8.267 1 9.83 ? CBB HEM 104 A 1 HETATM 22 C C1C HEM . . . C 3 0.14 22.753 13.427 1 12.81 ? C1C HEM 104 A 1 HETATM 23 C C2C HEM . . . C 3 -0.577 23.545 14.381 1 13.29 ? C2C HEM 104 A 1 HETATM 24 C C3C HEM . . . C 3 -0.114 23.238 15.612 1 13.73 ? C3C HEM 104 A 1 HETATM 25 C C4C HEM . . . C 3 0.963 22.256 15.428 1 12.58 ? C4C HEM 104 A 1 HETATM 26 C CMC HEM . . . C 3 -1.718 24.534 14.059 1 14.33 ? CMC HEM 104 A 1 HETATM 27 C CAC HEM . . . C 3 -0.469 23.818 16.981 1 14.8 ? CAC HEM 104 A 1 HETATM 28 C CBC HEM . . . C 3 -1.951 23.872 17.433 1 15.31 ? CBC HEM 104 A 1 HETATM 29 C C1D HEM . . . C 3 2.744 20.762 16.278 1 13.43 ? C1D HEM 104 A 1 HETATM 30 C C2D HEM . . . C 3 3.395 20.006 17.311 1 11.7 ? C2D HEM 104 A 1 HETATM 31 C C3D HEM . . . C 3 4.234 19.197 16.732 1 12.31 ? C3D HEM 104 A 1 HETATM 32 C C4D HEM . . . C 3 4.179 19.401 15.308 1 12.13 ? C4D HEM 104 A 1 HETATM 33 C CMD HEM . . . C 3 3.166 20.079 18.865 1 11.83 ? CMD HEM 104 A 1 HETATM 34 C CAD HEM . . . C 3 5.171 18.138 17.465 1 11.81 ? CAD HEM 104 A 1 HETATM 35 C CBD HEM . . . C 3 4.545 16.708 17.307 1 9.99 ? CBD HEM 104 A 1 HETATM 36 C CGD HEM . . . C 3 4.951 15.725 18.336 1 10.61 ? CGD HEM 104 A 1 HETATM 37 O O1D HEM . . . C 3 5.975 15.978 18.983 1 9.97 ? O1D HEM 104 A 1 HETATM 38 O O2D HEM . . . C 3 4.285 14.681 18.555 1 11.33 ? O2D HEM 104 A 1 HETATM 39 N NA HEM . . . C 3 4.116 19.959 12.426 1 9.01 ? NA HEM 104 A 1 HETATM 40 N NB HEM . . . C 3 2.055 21.612 11.463 1 9.45 ? NB HEM 104 A 1 HETATM 41 N NC HEM . . . C 3 1.121 22.029 14.086 1 12.16 ? NC HEM 104 A 1 HETATM 42 N ND HEM . . . C 3 3.213 20.392 15.037 1 11.63 ? ND HEM 104 A 1 HETATM 43 FE FE HEM . . . C 3 2.649 21.075 13.224 1 13.99 ? FE HEM 104 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 376 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 43 #