data_1CRJ # _model_server_result.job_id xD8BkLdQasg3DnuI3BLXOw _model_server_result.datetime_utc '2025-02-17 23:59:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1crj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":104}' # _entry.id 1CRJ # _exptl.entry_id 1CRJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 618.503 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEME C' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1CRJ _cell.length_a 36.56 _cell.length_b 36.56 _cell.length_c 137.53 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CRJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 19 A CYS 14 1_555 C CAB HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? covale ? covale2 A SG CYS 22 A CYS 17 1_555 C CAC HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.803 ? covale ? covale3 A C PRO 76 A PRO 71 1_555 A N M3L 77 A M3L 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale4 A C M3L 77 A M3L 72 1_555 A N LYS 78 A LYS 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.313 ? metalc ? metalc1 A NE2 HIS 23 A HIS 18 1_555 C FE HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? metalc ? metalc2 A SD MET 85 A MET 80 1_555 C FE HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? # _chem_comp.formula 'C34 H34 Fe N4 O4' _chem_comp.formula_weight 618.503 _chem_comp.id HEC _chem_comp.mon_nstd_flag . _chem_comp.name 'HEME C' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1CRJ _atom_sites.fract_transf_matrix[1][1] 0.027352 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.027352 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007271 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 117 117 SO4 SO4 . C 3 HEC A 1 104 104 HEC HEM . D 4 HOH A 1 106 106 HOH HOH . D 4 HOH A 2 108 108 HOH HOH . D 4 HOH A 3 109 109 HOH HOH . D 4 HOH A 4 110 110 HOH HOH . D 4 HOH A 5 112 112 HOH HOH . D 4 HOH A 6 113 113 HOH HOH . D 4 HOH A 7 121 121 HOH HOH . D 4 HOH A 8 122 122 HOH HOH . D 4 HOH A 9 125 125 HOH HOH . D 4 HOH A 10 126 126 HOH HOH . D 4 HOH A 11 128 128 HOH HOH . D 4 HOH A 12 129 129 HOH HOH . D 4 HOH A 13 132 132 HOH HOH . D 4 HOH A 14 136 136 HOH HOH . D 4 HOH A 15 137 137 HOH HOH . D 4 HOH A 16 138 138 HOH HOH . D 4 HOH A 17 140 140 HOH HOH . D 4 HOH A 18 141 141 HOH HOH . D 4 HOH A 19 145 145 HOH HOH . D 4 HOH A 20 149 149 HOH HOH . D 4 HOH A 21 152 152 HOH HOH . D 4 HOH A 22 153 153 HOH HOH . D 4 HOH A 23 156 156 HOH HOH . D 4 HOH A 24 158 158 HOH HOH . D 4 HOH A 25 160 160 HOH HOH . D 4 HOH A 26 164 164 HOH HOH . D 4 HOH A 27 167 167 HOH HOH . D 4 HOH A 28 168 168 HOH HOH . D 4 HOH A 29 172 172 HOH HOH . D 4 HOH A 30 174 174 HOH HOH . D 4 HOH A 31 178 178 HOH HOH . D 4 HOH A 32 187 187 HOH HOH . D 4 HOH A 33 192 192 HOH HOH . D 4 HOH A 34 193 193 HOH HOH . D 4 HOH A 35 195 195 HOH HOH . D 4 HOH A 36 196 196 HOH HOH . D 4 HOH A 37 197 197 HOH HOH . D 4 HOH A 38 204 204 HOH HOH . D 4 HOH A 39 208 208 HOH HOH . D 4 HOH A 40 209 209 HOH HOH . D 4 HOH A 41 214 214 HOH HOH . D 4 HOH A 42 215 215 HOH HOH . D 4 HOH A 43 300 300 HOH HOH . D 4 HOH A 44 301 301 HOH HOH . D 4 HOH A 45 302 302 HOH HOH . D 4 HOH A 46 303 303 HOH HOH . D 4 HOH A 47 304 304 HOH HOH . D 4 HOH A 48 305 305 HOH HOH . D 4 HOH A 49 306 306 HOH HOH . D 4 HOH A 50 307 307 HOH HOH . D 4 HOH A 51 308 308 HOH HOH . D 4 HOH A 52 309 309 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE HEC . . . C 3 2.882 21.046 13.15 1 11.02 ? FE HEC 104 A 1 HETATM 2 C CHA HEC . . . C 3 5.279 18.766 14.227 1 12.15 ? CHA HEC 104 A 1 HETATM 3 C CHB HEC . . . C 3 4.043 20.8 10.012 1 8.12 ? CHB HEC 104 A 1 HETATM 4 C CHC HEC . . . C 3 0.192 22.907 12.043 1 8.96 ? CHC HEC 104 A 1 HETATM 5 C CHD HEC . . . C 3 2.099 21.781 16.375 1 9.78 ? CHD HEC 104 A 1 HETATM 6 N NA HEC . . . C 3 4.381 20.031 12.279 1 11.92 ? NA HEC 104 A 1 HETATM 7 C C1A HEC . . . C 3 5.259 19.091 12.876 1 13.1 ? C1A HEC 104 A 1 HETATM 8 C C2A HEC . . . C 3 5.96 18.393 11.833 1 13.93 ? C2A HEC 104 A 1 HETATM 9 C C3A HEC . . . C 3 5.644 18.943 10.648 1 12.44 ? C3A HEC 104 A 1 HETATM 10 C C4A HEC . . . C 3 4.666 19.962 10.883 1 11.08 ? C4A HEC 104 A 1 HETATM 11 C CMA HEC . . . C 3 6.191 18.499 9.251 1 12.55 ? CMA HEC 104 A 1 HETATM 12 C CAA HEC . . . C 3 6.99 17.264 12.173 1 13.55 ? CAA HEC 104 A 1 HETATM 13 C CBA HEC . . . C 3 8.345 18.046 12.54 1 13.32 ? CBA HEC 104 A 1 HETATM 14 C CGA HEC . . . C 3 9.615 17.241 12.589 1 12.1 ? CGA HEC 104 A 1 HETATM 15 O O1A HEC . . . C 3 10.655 17.742 13.01 1 13.61 ? O1A HEC 104 A 1 HETATM 16 O O2A HEC . . . C 3 9.542 16.063 12.167 1 15.36 ? O2A HEC 104 A 1 HETATM 17 N NB HEC . . . C 3 2.176 21.704 11.355 1 9.65 ? NB HEC 104 A 1 HETATM 18 C C1B HEC . . . C 3 2.935 21.588 10.201 1 10.49 ? C1B HEC 104 A 1 HETATM 19 C C2B HEC . . . C 3 2.191 22.297 9.145 1 11.37 ? C2B HEC 104 A 1 HETATM 20 C C3B HEC . . . C 3 1.139 22.892 9.71 1 10.28 ? C3B HEC 104 A 1 HETATM 21 C C4B HEC . . . C 3 1.164 22.565 11.106 1 7.86 ? C4B HEC 104 A 1 HETATM 22 C CMB HEC . . . C 3 2.719 22.355 7.707 1 9.31 ? CMB HEC 104 A 1 HETATM 23 C CAB HEC . . . C 3 0.036 23.753 9.052 1 10.87 ? CAB HEC 104 A 1 HETATM 24 C CBB HEC . . . C 3 -0.86 22.973 8.041 1 12.69 ? CBB HEC 104 A 1 HETATM 25 N NC HEC . . . C 3 1.438 22.106 14.071 1 9.07 ? NC HEC 104 A 1 HETATM 26 C C1C HEC . . . C 3 0.433 22.874 13.441 1 9.84 ? C1C HEC 104 A 1 HETATM 27 C C2C HEC . . . C 3 -0.346 23.581 14.409 1 10.04 ? C2C HEC 104 A 1 HETATM 28 C C3C HEC . . . C 3 0.17 23.282 15.606 1 11.44 ? C3C HEC 104 A 1 HETATM 29 C C4C HEC . . . C 3 1.308 22.379 15.395 1 10.47 ? C4C HEC 104 A 1 HETATM 30 C CMC HEC . . . C 3 -1.565 24.503 14.091 1 8.4 ? CMC HEC 104 A 1 HETATM 31 C CAC HEC . . . C 3 -0.214 23.902 16.967 1 10.15 ? CAC HEC 104 A 1 HETATM 32 C CBC HEC . . . C 3 -1.655 24.014 17.468 1 10.76 ? CBC HEC 104 A 1 HETATM 33 N ND HEC . . . C 3 3.553 20.372 14.975 1 11.3 ? ND HEC 104 A 1 HETATM 34 C C1D HEC . . . C 3 3.055 20.8 16.208 1 9.61 ? C1D HEC 104 A 1 HETATM 35 C C2D HEC . . . C 3 3.767 20.075 17.221 1 10.91 ? C2D HEC 104 A 1 HETATM 36 C C3D HEC . . . C 3 4.689 19.303 16.622 1 9.95 ? C3D HEC 104 A 1 HETATM 37 C C4D HEC . . . C 3 4.477 19.395 15.181 1 9.68 ? C4D HEC 104 A 1 HETATM 38 C CMD HEC . . . C 3 3.533 20.212 18.76 1 11.94 ? CMD HEC 104 A 1 HETATM 39 C CAD HEC . . . C 3 5.624 18.252 17.24 1 7.03 ? CAD HEC 104 A 1 HETATM 40 C CBD HEC . . . C 3 4.794 16.998 17.506 1 8.55 ? CBD HEC 104 A 1 HETATM 41 C CGD HEC . . . C 3 5.387 15.93 18.33 1 8.48 ? CGD HEC 104 A 1 HETATM 42 O O1D HEC . . . C 3 6.487 16.139 18.937 1 10.85 ? O1D HEC 104 A 1 HETATM 43 O O2D HEC . . . C 3 4.666 14.893 18.302 1 9.37 ? O2D HEC 104 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 254 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 43 #