data_1CSM # _model_server_result.job_id LSoeIQpg-XfXT7N3UZNdsA _model_server_result.datetime_utc '2024-11-16 19:33:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1csm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 1CSM # _exptl.entry_id 1CSM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 204.225 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TRYPTOPHAN _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation 'ALLELE MUTANT, THR 226 ILE' _entity.pdbx_fragment ? _entity.pdbx_ec 4.1.3.27 # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1CSM _cell.length_a 95.8 _cell.length_b 95.8 _cell.length_c 157.9 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CSM _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C11 H12 N2 O2' _chem_comp.formula_weight 204.225 _chem_comp.id TRP _chem_comp.mon_nstd_flag y _chem_comp.name TRYPTOPHAN _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA TRP sing 306 n n N H TRP sing 307 n n N H2 TRP sing 308 n n CA C TRP sing 309 n n CA CB TRP sing 310 n n CA HA TRP sing 311 n n C O TRP doub 312 n n C OXT TRP sing 313 n n CB CG TRP sing 314 n n CB HB2 TRP sing 315 n n CB HB3 TRP sing 316 n n CG CD1 TRP doub 317 n y CG CD2 TRP sing 318 n y CD1 NE1 TRP sing 319 n y CD1 HD1 TRP sing 320 n n CD2 CE2 TRP doub 321 n y CD2 CE3 TRP sing 322 n y NE1 CE2 TRP sing 323 n y NE1 HE1 TRP sing 324 n n CE2 CZ2 TRP sing 325 n y CE3 CZ3 TRP doub 326 n y CE3 HE3 TRP sing 327 n n CZ2 CH2 TRP doub 328 n y CZ2 HZ2 TRP sing 329 n n CZ3 CH2 TRP sing 330 n y CZ3 HZ3 TRP sing 331 n n CH2 HH2 TRP sing 332 n n OXT HXT TRP sing 333 n n # _atom_sites.entry_id 1CSM _atom_sites.fract_transf_matrix[1][1] 0.010438 _atom_sites.fract_transf_matrix[1][2] 0.006027 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012053 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006333 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 TRP A 1 502 502 TRP TRP . D 2 TRP B 1 501 501 TRP TRP . E 3 HOH A 1 503 503 HOH HOH . E 3 HOH A 2 505 505 HOH HOH . E 3 HOH A 3 507 507 HOH HOH . E 3 HOH A 4 511 511 HOH HOH . E 3 HOH A 5 514 514 HOH HOH . E 3 HOH A 6 515 515 HOH HOH . E 3 HOH A 7 517 517 HOH HOH . E 3 HOH A 8 519 519 HOH HOH . E 3 HOH A 9 520 520 HOH HOH . E 3 HOH A 10 522 522 HOH HOH . E 3 HOH A 11 526 526 HOH HOH . E 3 HOH A 12 527 527 HOH HOH . E 3 HOH A 13 528 528 HOH HOH . E 3 HOH A 14 529 529 HOH HOH . E 3 HOH A 15 535 535 HOH HOH . E 3 HOH A 16 536 536 HOH HOH . E 3 HOH A 17 538 538 HOH HOH . E 3 HOH A 18 539 539 HOH HOH . E 3 HOH A 19 542 542 HOH HOH . E 3 HOH A 20 543 543 HOH HOH . E 3 HOH A 21 546 546 HOH HOH . E 3 HOH A 22 547 547 HOH HOH . E 3 HOH A 23 548 548 HOH HOH . E 3 HOH A 24 549 549 HOH HOH . E 3 HOH A 25 550 550 HOH HOH . E 3 HOH A 26 551 551 HOH HOH . E 3 HOH A 27 553 553 HOH HOH . E 3 HOH A 28 559 559 HOH HOH . E 3 HOH A 29 560 560 HOH HOH . E 3 HOH A 30 562 562 HOH HOH . E 3 HOH A 31 563 563 HOH HOH . E 3 HOH A 32 565 565 HOH HOH . E 3 HOH A 33 567 567 HOH HOH . E 3 HOH A 34 568 568 HOH HOH . E 3 HOH A 35 570 570 HOH HOH . E 3 HOH A 36 571 571 HOH HOH . E 3 HOH A 37 574 574 HOH HOH . E 3 HOH A 38 575 575 HOH HOH . E 3 HOH A 39 576 576 HOH HOH . E 3 HOH A 40 580 580 HOH HOH . E 3 HOH A 41 581 581 HOH HOH . E 3 HOH A 42 582 582 HOH HOH . E 3 HOH A 43 592 592 HOH HOH . E 3 HOH A 44 597 597 HOH HOH . E 3 HOH A 45 598 598 HOH HOH . F 3 HOH B 1 504 504 HOH HOH . F 3 HOH B 2 506 506 HOH HOH . F 3 HOH B 3 508 508 HOH HOH . F 3 HOH B 4 509 509 HOH HOH . F 3 HOH B 5 510 510 HOH HOH . F 3 HOH B 6 512 512 HOH HOH . F 3 HOH B 7 513 513 HOH HOH . F 3 HOH B 8 516 516 HOH HOH . F 3 HOH B 9 518 518 HOH HOH . F 3 HOH B 10 521 521 HOH HOH . F 3 HOH B 11 523 523 HOH HOH . F 3 HOH B 12 524 524 HOH HOH . F 3 HOH B 13 525 525 HOH HOH . F 3 HOH B 14 530 530 HOH HOH . F 3 HOH B 15 531 531 HOH HOH . F 3 HOH B 16 532 532 HOH HOH . F 3 HOH B 17 533 533 HOH HOH . F 3 HOH B 18 534 534 HOH HOH . F 3 HOH B 19 537 537 HOH HOH . F 3 HOH B 20 540 540 HOH HOH . F 3 HOH B 21 541 541 HOH HOH . F 3 HOH B 22 544 544 HOH HOH . F 3 HOH B 23 545 545 HOH HOH . F 3 HOH B 24 552 552 HOH HOH . F 3 HOH B 25 554 554 HOH HOH . F 3 HOH B 26 555 555 HOH HOH . F 3 HOH B 27 556 556 HOH HOH . F 3 HOH B 28 557 557 HOH HOH . F 3 HOH B 29 558 558 HOH HOH . F 3 HOH B 30 561 561 HOH HOH . F 3 HOH B 31 564 564 HOH HOH . F 3 HOH B 32 566 566 HOH HOH . F 3 HOH B 33 569 569 HOH HOH . F 3 HOH B 34 572 572 HOH HOH . F 3 HOH B 35 573 573 HOH HOH . F 3 HOH B 36 577 577 HOH HOH . F 3 HOH B 37 578 578 HOH HOH . F 3 HOH B 38 579 579 HOH HOH . F 3 HOH B 39 583 583 HOH HOH . F 3 HOH B 40 584 584 HOH HOH . F 3 HOH B 41 585 585 HOH HOH . F 3 HOH B 42 586 586 HOH HOH . F 3 HOH B 43 587 587 HOH HOH . F 3 HOH B 44 588 588 HOH HOH . F 3 HOH B 45 589 589 HOH HOH . F 3 HOH B 46 590 590 HOH HOH . F 3 HOH B 47 591 591 HOH HOH . F 3 HOH B 48 593 593 HOH HOH . F 3 HOH B 49 594 594 HOH HOH . F 3 HOH B 50 595 595 HOH HOH . F 3 HOH B 51 596 596 HOH HOH . F 3 HOH B 52 599 599 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N TRP . . . C 2 4.275 44.823 20.372 1 17.28 ? N TRP 502 A 1 HETATM 2 C CA TRP . . . C 2 4.093 46.297 20.632 1 20.75 ? CA TRP 502 A 1 HETATM 3 C C TRP . . . C 2 2.615 46.652 20.808 1 19.4 ? C TRP 502 A 1 HETATM 4 O O TRP . . . C 2 2.283 47.729 21.359 1 17.2 ? O TRP 502 A 1 HETATM 5 C CB TRP . . . C 2 4.671 47.102 19.475 1 21.06 ? CB TRP 502 A 1 HETATM 6 C CG TRP . . . C 2 4.034 46.805 18.138 1 19.94 ? CG TRP 502 A 1 HETATM 7 C CD1 TRP . . . C 2 4.373 45.808 17.265 1 19.45 ? CD1 TRP 502 A 1 HETATM 8 C CD2 TRP . . . C 2 2.997 47.559 17.503 1 18.01 ? CD2 TRP 502 A 1 HETATM 9 N NE1 TRP . . . C 2 3.61 45.903 16.12 1 19.13 ? NE1 TRP 502 A 1 HETATM 10 C CE2 TRP . . . C 2 2.764 46.974 16.242 1 17.42 ? CE2 TRP 502 A 1 HETATM 11 C CE3 TRP . . . C 2 2.245 48.679 17.878 1 16.59 ? CE3 TRP 502 A 1 HETATM 12 C CZ2 TRP . . . C 2 1.818 47.468 15.356 1 16.46 ? CZ2 TRP 502 A 1 HETATM 13 C CZ3 TRP . . . C 2 1.305 49.166 16.992 1 16.08 ? CZ3 TRP 502 A 1 HETATM 14 C CH2 TRP . . . C 2 1.101 48.561 15.747 1 18.28 ? CH2 TRP 502 A 1 HETATM 15 O OXT TRP . . . C 2 1.792 45.84 20.349 1 22.25 ? OXT TRP 502 A 1 HETATM 16 H H1 TRP . . . C 2 3.662 44.524 19.591 1 0 ? H1 TRP 502 A 1 HETATM 17 H H2 TRP . . . C 2 5.261 44.545 20.187 1 0 ? H2 TRP 502 A 1 HETATM 18 H H3 TRP . . . C 2 3.923 44.352 21.232 1 0 ? H3 TRP 502 A 1 HETATM 19 H HE1 TRP . . . C 2 3.662 45.287 15.344 1 0 ? HE1 TRP 502 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 19 #