data_1CSN # _model_server_result.job_id 2mjL29KnKD4uBS6fvQvyfw _model_server_result.datetime_utc '2025-03-01 09:03:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1csn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":299}' # _entry.id 1CSN # _exptl.entry_id 1CSN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 507.181 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1CSN _cell.length_a 78.96 _cell.length_b 78.96 _cell.length_c 120.38 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CSN _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 -x,-x+y,-z+2/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 80.253333 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 136 A ASN 136 1_555 B MG MG . A MG 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.742 ? metalc ? metalc2 E O1G ATP . A ATP 299 1_555 B MG MG . A MG 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc3 E O2A ATP . A ATP 299 1_555 B MG MG . A MG 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? # _chem_comp.formula 'C10 H16 N5 O13 P3' _chem_comp.formula_weight 507.181 _chem_comp.id ATP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PG O1G ATP doub 70 n n PG O2G ATP sing 71 n n PG O3G ATP sing 72 n n PG O3B ATP sing 73 n n O2G HOG2 ATP sing 74 n n O3G HOG3 ATP sing 75 n n PB O1B ATP doub 76 n n PB O2B ATP sing 77 n n PB O3B ATP sing 78 n n PB O3A ATP sing 79 n n O2B HOB2 ATP sing 80 n n PA O1A ATP doub 81 n n PA O2A ATP sing 82 n n PA O3A ATP sing 83 n n PA O5' ATP sing 84 n n O2A HOA2 ATP sing 85 n n O5' C5' ATP sing 86 n n C5' C4' ATP sing 87 n n C5' "H5'1" ATP sing 88 n n C5' "H5'2" ATP sing 89 n n C4' O4' ATP sing 90 n n C4' C3' ATP sing 91 n n C4' H4' ATP sing 92 n n O4' C1' ATP sing 93 n n C3' O3' ATP sing 94 n n C3' C2' ATP sing 95 n n C3' H3' ATP sing 96 n n O3' HO3' ATP sing 97 n n C2' O2' ATP sing 98 n n C2' C1' ATP sing 99 n n C2' H2' ATP sing 100 n n O2' HO2' ATP sing 101 n n C1' N9 ATP sing 102 n n C1' H1' ATP sing 103 n n N9 C8 ATP sing 104 n y N9 C4 ATP sing 105 n y C8 N7 ATP doub 106 n y C8 H8 ATP sing 107 n n N7 C5 ATP sing 108 n y C5 C6 ATP sing 109 n y C5 C4 ATP doub 110 n y C6 N6 ATP sing 111 n n C6 N1 ATP doub 112 n y N6 HN61 ATP sing 113 n n N6 HN62 ATP sing 114 n n N1 C2 ATP sing 115 n y C2 N3 ATP doub 116 n y C2 H2 ATP sing 117 n n N3 C4 ATP sing 118 n y # _atom_sites.entry_id 1CSN _atom_sites.fract_transf_matrix[1][1] 0.012665 _atom_sites.fract_transf_matrix[1][2] 0.007312 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014624 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008307 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 300 300 MG MG . C 3 SO4 A 1 301 301 SO4 SO4 . D 3 SO4 A 1 302 302 SO4 SO4 . E 4 ATP A 1 299 299 ATP ATP . F 5 HOH A 1 400 400 HOH HOH . F 5 HOH A 2 401 401 HOH HOH . F 5 HOH A 3 402 402 HOH HOH . F 5 HOH A 4 403 403 HOH HOH . F 5 HOH A 5 404 404 HOH HOH . F 5 HOH A 6 405 405 HOH HOH . F 5 HOH A 7 406 406 HOH HOH . F 5 HOH A 8 407 407 HOH HOH . F 5 HOH A 9 408 408 HOH HOH . F 5 HOH A 10 409 409 HOH HOH . F 5 HOH A 11 410 410 HOH HOH . F 5 HOH A 12 411 411 HOH HOH . F 5 HOH A 13 412 412 HOH HOH . F 5 HOH A 14 413 413 HOH HOH . F 5 HOH A 15 414 414 HOH HOH . F 5 HOH A 16 415 415 HOH HOH . F 5 HOH A 17 416 416 HOH HOH . F 5 HOH A 18 417 417 HOH HOH . F 5 HOH A 19 418 418 HOH HOH . F 5 HOH A 20 419 419 HOH HOH . F 5 HOH A 21 420 420 HOH HOH . F 5 HOH A 22 421 421 HOH HOH . F 5 HOH A 23 422 422 HOH HOH . F 5 HOH A 24 423 423 HOH HOH . F 5 HOH A 25 424 424 HOH HOH . F 5 HOH A 26 425 425 HOH HOH . F 5 HOH A 27 426 426 HOH HOH . F 5 HOH A 28 427 427 HOH HOH . F 5 HOH A 29 428 428 HOH HOH . F 5 HOH A 30 429 429 HOH HOH . F 5 HOH A 31 430 430 HOH HOH . F 5 HOH A 32 431 431 HOH HOH . F 5 HOH A 33 432 432 HOH HOH . F 5 HOH A 34 433 433 HOH HOH . F 5 HOH A 35 434 434 HOH HOH . F 5 HOH A 36 435 435 HOH HOH . F 5 HOH A 37 436 436 HOH HOH . F 5 HOH A 38 437 437 HOH HOH . F 5 HOH A 39 438 438 HOH HOH . F 5 HOH A 40 439 439 HOH HOH . F 5 HOH A 41 440 440 HOH HOH . F 5 HOH A 42 441 441 HOH HOH . F 5 HOH A 43 442 442 HOH HOH . F 5 HOH A 44 443 443 HOH HOH . F 5 HOH A 45 444 444 HOH HOH . F 5 HOH A 46 445 445 HOH HOH . F 5 HOH A 47 446 446 HOH HOH . F 5 HOH A 48 447 447 HOH HOH . F 5 HOH A 49 448 448 HOH HOH . F 5 HOH A 50 449 449 HOH HOH . F 5 HOH A 51 450 450 HOH HOH . F 5 HOH A 52 451 451 HOH HOH . F 5 HOH A 53 452 452 HOH HOH . F 5 HOH A 54 453 453 HOH HOH . F 5 HOH A 55 454 454 HOH HOH . F 5 HOH A 56 455 455 HOH HOH . F 5 HOH A 57 456 456 HOH HOH . F 5 HOH A 58 457 457 HOH HOH . F 5 HOH A 59 458 458 HOH HOH . F 5 HOH A 60 459 459 HOH HOH . F 5 HOH A 61 460 460 HOH HOH . F 5 HOH A 62 461 461 HOH HOH . F 5 HOH A 63 462 462 HOH HOH . F 5 HOH A 64 463 463 HOH HOH . F 5 HOH A 65 464 464 HOH HOH . F 5 HOH A 66 465 465 HOH HOH . F 5 HOH A 67 466 466 HOH HOH . F 5 HOH A 68 467 467 HOH HOH . F 5 HOH A 69 468 468 HOH HOH . F 5 HOH A 70 469 469 HOH HOH . F 5 HOH A 71 470 470 HOH HOH . F 5 HOH A 72 471 471 HOH HOH . F 5 HOH A 73 472 472 HOH HOH . F 5 HOH A 74 473 473 HOH HOH . F 5 HOH A 75 474 474 HOH HOH . F 5 HOH A 76 475 475 HOH HOH . F 5 HOH A 77 476 476 HOH HOH . F 5 HOH A 78 477 477 HOH HOH . F 5 HOH A 79 478 478 HOH HOH . F 5 HOH A 80 479 479 HOH HOH . F 5 HOH A 81 480 480 HOH HOH . F 5 HOH A 82 481 481 HOH HOH . F 5 HOH A 83 482 482 HOH HOH . F 5 HOH A 84 483 483 HOH HOH . F 5 HOH A 85 484 484 HOH HOH . F 5 HOH A 86 485 485 HOH HOH . F 5 HOH A 87 486 486 HOH HOH . F 5 HOH A 88 487 487 HOH HOH . F 5 HOH A 89 488 488 HOH HOH . F 5 HOH A 90 489 489 HOH HOH . F 5 HOH A 91 490 490 HOH HOH . F 5 HOH A 92 491 491 HOH HOH . F 5 HOH A 93 492 492 HOH HOH . F 5 HOH A 94 493 493 HOH HOH . F 5 HOH A 95 494 494 HOH HOH . F 5 HOH A 96 495 495 HOH HOH . F 5 HOH A 97 496 496 HOH HOH . F 5 HOH A 98 497 497 HOH HOH . F 5 HOH A 99 498 498 HOH HOH . F 5 HOH A 100 499 499 HOH HOH . F 5 HOH A 101 500 500 HOH HOH . F 5 HOH A 102 501 501 HOH HOH . F 5 HOH A 103 502 502 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ATP . . . E 4 -20.388 44.111 54.614 1 88.37 ? PG ATP 299 A 1 HETATM 2 O O1G ATP . . . E 4 -19.275 45.013 54.187 1 84.78 ? O1G ATP 299 A 1 HETATM 3 O O2G ATP . . . E 4 -20.379 43.579 55.985 1 85.86 ? O2G ATP 299 A 1 HETATM 4 O O3G ATP . . . E 4 -20.791 43.225 53.493 1 85.97 ? O3G ATP 299 A 1 HETATM 5 P PB ATP . . . E 4 -22.73 45.716 55.609 1 67.45 ? PB ATP 299 A 1 HETATM 6 O O1B ATP . . . E 4 -23.585 44.601 56.121 1 71.58 ? O1B ATP 299 A 1 HETATM 7 O O2B ATP . . . E 4 -22.105 46.639 56.573 1 72.1 ? O2B ATP 299 A 1 HETATM 8 O O3B ATP . . . E 4 -21.617 45.163 54.523 1 77.11 ? O3B ATP 299 A 1 HETATM 9 P PA ATP . . . E 4 -22.828 47.822 53.762 1 39.79 ? PA ATP 299 A 1 HETATM 10 O O1A ATP . . . E 4 -23.032 49.01 54.591 1 38.6 ? O1A ATP 299 A 1 HETATM 11 O O2A ATP . . . E 4 -21.437 47.511 53.266 1 45.2 ? O2A ATP 299 A 1 HETATM 12 O O3A ATP . . . E 4 -23.469 46.545 54.445 1 51.18 ? O3A ATP 299 A 1 HETATM 13 O O5' ATP . . . E 4 -23.63 47.887 52.41 1 36.77 ? O5' ATP 299 A 1 HETATM 14 C C5' ATP . . . E 4 -23.712 46.817 51.493 1 30.51 ? C5' ATP 299 A 1 HETATM 15 C C4' ATP . . . E 4 -23.975 47.295 50.06 1 31.57 ? C4' ATP 299 A 1 HETATM 16 O O4' ATP . . . E 4 -25.122 48.149 49.895 1 32.47 ? O4' ATP 299 A 1 HETATM 17 C C3' ATP . . . E 4 -22.869 48.206 49.665 1 36.11 ? C3' ATP 299 A 1 HETATM 18 O O3' ATP . . . E 4 -21.7 47.402 49.431 1 42.84 ? O3' ATP 299 A 1 HETATM 19 C C2' ATP . . . E 4 -23.473 48.833 48.414 1 36.89 ? C2' ATP 299 A 1 HETATM 20 O O2' ATP . . . E 4 -23.628 47.832 47.41 1 40.56 ? O2' ATP 299 A 1 HETATM 21 C C1' ATP . . . E 4 -24.859 49.2 48.937 1 31.87 ? C1' ATP 299 A 1 HETATM 22 N N9 ATP . . . E 4 -24.939 50.521 49.659 1 31.78 ? N9 ATP 299 A 1 HETATM 23 C C8 ATP . . . E 4 -24.605 50.817 50.964 1 27.83 ? C8 ATP 299 A 1 HETATM 24 N N7 ATP . . . E 4 -24.854 52.037 51.333 1 28.17 ? N7 ATP 299 A 1 HETATM 25 C C5 ATP . . . E 4 -25.391 52.608 50.203 1 23.97 ? C5 ATP 299 A 1 HETATM 26 C C6 ATP . . . E 4 -25.848 53.888 49.956 1 23.43 ? C6 ATP 299 A 1 HETATM 27 N N6 ATP . . . E 4 -25.69 54.848 50.865 1 22.24 ? N6 ATP 299 A 1 HETATM 28 N N1 ATP . . . E 4 -26.336 54.137 48.722 1 26.19 ? N1 ATP 299 A 1 HETATM 29 C C2 ATP . . . E 4 -26.352 53.186 47.799 1 25.13 ? C2 ATP 299 A 1 HETATM 30 N N3 ATP . . . E 4 -25.926 51.951 47.935 1 27.93 ? N3 ATP 299 A 1 HETATM 31 C C4 ATP . . . E 4 -25.454 51.716 49.173 1 27.24 ? C4 ATP 299 A 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 31 #