data_1CSU # _model_server_result.job_id yMcHL0h92Ojtf-j3v2nIig _model_server_result.datetime_utc '2024-12-26 13:08:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1csu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":104}' # _entry.id 1CSU # _exptl.entry_id 1CSU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 618.503 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEME C' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1CSU _cell.length_a 36.51 _cell.length_b 36.51 _cell.length_c 137.11 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CSU _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 19 A CYS 14 1_555 C CAB HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.778 ? covale ? covale2 A SG CYS 22 A CYS 17 1_555 C CAC HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.824 ? covale ? covale3 A C PRO 76 A PRO 71 1_555 A N M3L 77 A M3L 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale4 A C M3L 77 A M3L 72 1_555 A N LYS 78 A LYS 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 ? metalc ? metalc1 A NE2 HIS 23 A HIS 18 1_555 C FE HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? metalc ? metalc2 A SD MET 85 A MET 80 1_555 C FE HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? # _chem_comp.formula 'C34 H34 Fe N4 O4' _chem_comp.formula_weight 618.503 _chem_comp.id HEC _chem_comp.mon_nstd_flag . _chem_comp.name 'HEME C' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1CSU _atom_sites.fract_transf_matrix[1][1] 0.02739 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02739 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007293 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 117 117 SO4 SO4 . C 3 HEC A 1 104 104 HEC HEM . D 4 HOH A 1 106 106 HOH HOH . D 4 HOH A 2 108 108 HOH HOH . D 4 HOH A 3 110 110 HOH HOH . D 4 HOH A 4 112 112 HOH HOH . D 4 HOH A 5 113 113 HOH HOH . D 4 HOH A 6 118 118 HOH HOH . D 4 HOH A 7 119 119 HOH HOH . D 4 HOH A 8 121 121 HOH HOH . D 4 HOH A 9 122 122 HOH HOH . D 4 HOH A 10 123 123 HOH HOH . D 4 HOH A 11 124 124 HOH HOH . D 4 HOH A 12 125 125 HOH HOH . D 4 HOH A 13 126 126 HOH HOH . D 4 HOH A 14 127 127 HOH HOH . D 4 HOH A 15 129 129 HOH HOH . D 4 HOH A 16 133 133 HOH HOH . D 4 HOH A 17 135 135 HOH HOH . D 4 HOH A 18 136 136 HOH HOH . D 4 HOH A 19 137 137 HOH HOH . D 4 HOH A 20 138 138 HOH HOH . D 4 HOH A 21 141 141 HOH HOH . D 4 HOH A 22 142 142 HOH HOH . D 4 HOH A 23 144 144 HOH HOH . D 4 HOH A 24 145 145 HOH HOH . D 4 HOH A 25 146 146 HOH HOH . D 4 HOH A 26 148 148 HOH HOH . D 4 HOH A 27 150 150 HOH HOH . D 4 HOH A 28 151 151 HOH HOH . D 4 HOH A 29 152 152 HOH HOH . D 4 HOH A 30 153 153 HOH HOH . D 4 HOH A 31 154 154 HOH HOH . D 4 HOH A 32 158 158 HOH HOH . D 4 HOH A 33 160 160 HOH HOH . D 4 HOH A 34 163 163 HOH HOH . D 4 HOH A 35 166 166 HOH HOH . D 4 HOH A 36 167 167 HOH HOH . D 4 HOH A 37 168 168 HOH HOH . D 4 HOH A 38 170 170 HOH HOH . D 4 HOH A 39 172 172 HOH HOH . D 4 HOH A 40 174 174 HOH HOH . D 4 HOH A 41 175 175 HOH HOH . D 4 HOH A 42 177 177 HOH HOH . D 4 HOH A 43 180 180 HOH HOH . D 4 HOH A 44 181 181 HOH HOH . D 4 HOH A 45 182 182 HOH HOH . D 4 HOH A 46 183 183 HOH HOH . D 4 HOH A 47 184 184 HOH HOH . D 4 HOH A 48 185 185 HOH HOH . D 4 HOH A 49 188 188 HOH HOH . D 4 HOH A 50 189 189 HOH HOH . D 4 HOH A 51 191 191 HOH HOH . D 4 HOH A 52 195 195 HOH HOH . D 4 HOH A 53 196 196 HOH HOH . D 4 HOH A 54 197 197 HOH HOH . D 4 HOH A 55 198 198 HOH HOH . D 4 HOH A 56 199 199 HOH HOH . D 4 HOH A 57 201 201 HOH HOH . D 4 HOH A 58 202 202 HOH HOH . D 4 HOH A 59 204 204 HOH HOH . D 4 HOH A 60 208 208 HOH HOH . D 4 HOH A 61 209 209 HOH HOH . D 4 HOH A 62 211 211 HOH HOH . D 4 HOH A 63 214 214 HOH HOH . D 4 HOH A 64 215 215 HOH HOH . D 4 HOH A 65 216 216 HOH HOH . D 4 HOH A 66 217 217 HOH HOH . D 4 HOH A 67 218 218 HOH HOH . D 4 HOH A 68 221 221 HOH HOH . D 4 HOH A 69 227 227 HOH HOH . D 4 HOH A 70 231 231 HOH HOH . D 4 HOH A 71 252 252 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE HEC . . . C 3 2.801 20.979 13.126 1 13.7 ? FE HEC 104 A 1 HETATM 2 C CHA HEC . . . C 3 5.04 18.636 14.192 1 12.49 ? CHA HEC 104 A 1 HETATM 3 C CHB HEC . . . C 3 3.986 20.753 9.971 1 12.64 ? CHB HEC 104 A 1 HETATM 4 C CHC HEC . . . C 3 0.147 22.846 12.068 1 10.93 ? CHC HEC 104 A 1 HETATM 5 C CHD HEC . . . C 3 2.064 21.749 16.368 1 12.13 ? CHD HEC 104 A 1 HETATM 6 N NA HEC . . . C 3 4.255 19.911 12.263 1 14.04 ? NA HEC 104 A 1 HETATM 7 C C1A HEC . . . C 3 5.039 18.911 12.817 1 12.93 ? C1A HEC 104 A 1 HETATM 8 C C2A HEC . . . C 3 5.781 18.233 11.78 1 12.54 ? C2A HEC 104 A 1 HETATM 9 C C3A HEC . . . C 3 5.523 18.845 10.637 1 12.93 ? C3A HEC 104 A 1 HETATM 10 C C4A HEC . . . C 3 4.535 19.882 10.884 1 12.58 ? C4A HEC 104 A 1 HETATM 11 C CMA HEC . . . C 3 6.046 18.49 9.22 1 11.56 ? CMA HEC 104 A 1 HETATM 12 C CAA HEC . . . C 3 6.796 17.079 12.037 1 11.62 ? CAA HEC 104 A 1 HETATM 13 C CBA HEC . . . C 3 8.215 17.75 12.113 1 14.78 ? CBA HEC 104 A 1 HETATM 14 C CGA HEC . . . C 3 9.407 16.884 12.405 1 12.27 ? CGA HEC 104 A 1 HETATM 15 O O1A HEC . . . C 3 10.419 17.553 12.657 1 14.03 ? O1A HEC 104 A 1 HETATM 16 O O2A HEC . . . C 3 9.34 15.646 12.367 1 12.71 ? O2A HEC 104 A 1 HETATM 17 N NB HEC . . . C 3 2.145 21.631 11.344 1 11.63 ? NB HEC 104 A 1 HETATM 18 C C1B HEC . . . C 3 2.864 21.537 10.171 1 13.91 ? C1B HEC 104 A 1 HETATM 19 C C2B HEC . . . C 3 2.115 22.266 9.151 1 13.21 ? C2B HEC 104 A 1 HETATM 20 C C3B HEC . . . C 3 1.069 22.859 9.729 1 11.12 ? C3B HEC 104 A 1 HETATM 21 C C4B HEC . . . C 3 1.088 22.464 11.136 1 11.57 ? C4B HEC 104 A 1 HETATM 22 C CMB HEC . . . C 3 2.626 22.388 7.681 1 13.28 ? CMB HEC 104 A 1 HETATM 23 C CAB HEC . . . C 3 -0.027 23.715 9.075 1 13.6 ? CAB HEC 104 A 1 HETATM 24 C CBB HEC . . . C 3 -1.008 22.927 8.143 1 14.29 ? CBB HEC 104 A 1 HETATM 25 N NC HEC . . . C 3 1.368 22.061 14.035 1 11.8 ? NC HEC 104 A 1 HETATM 26 C C1C HEC . . . C 3 0.393 22.82 13.454 1 12.15 ? C1C HEC 104 A 1 HETATM 27 C C2C HEC . . . C 3 -0.354 23.567 14.422 1 12.52 ? C2C HEC 104 A 1 HETATM 28 C C3C HEC . . . C 3 0.164 23.229 15.64 1 12.07 ? C3C HEC 104 A 1 HETATM 29 C C4C HEC . . . C 3 1.269 22.322 15.403 1 11.84 ? C4C HEC 104 A 1 HETATM 30 C CMC HEC . . . C 3 -1.523 24.504 14.096 1 12.94 ? CMC HEC 104 A 1 HETATM 31 C CAC HEC . . . C 3 -0.239 23.836 16.985 1 12.83 ? CAC HEC 104 A 1 HETATM 32 C CBC HEC . . . C 3 -1.781 23.915 17.263 1 12.59 ? CBC HEC 104 A 1 HETATM 33 N ND HEC . . . C 3 3.437 20.329 14.969 1 13.17 ? ND HEC 104 A 1 HETATM 34 C C1D HEC . . . C 3 3.004 20.789 16.194 1 11.47 ? C1D HEC 104 A 1 HETATM 35 C C2D HEC . . . C 3 3.701 20.051 17.211 1 11.53 ? C2D HEC 104 A 1 HETATM 36 C C3D HEC . . . C 3 4.573 19.231 16.6 1 12.24 ? C3D HEC 104 A 1 HETATM 37 C C4D HEC . . . C 3 4.348 19.328 15.16 1 12.05 ? C4D HEC 104 A 1 HETATM 38 C CMD HEC . . . C 3 3.517 20.229 18.75 1 11.53 ? CMD HEC 104 A 1 HETATM 39 C CAD HEC . . . C 3 5.523 18.179 17.211 1 11.13 ? CAD HEC 104 A 1 HETATM 40 C CBD HEC . . . C 3 4.788 16.842 17.31 1 13.07 ? CBD HEC 104 A 1 HETATM 41 C CGD HEC . . . C 3 5.321 15.789 18.25 1 13.15 ? CGD HEC 104 A 1 HETATM 42 O O1D HEC . . . C 3 6.462 15.9 18.73 1 13.15 ? O1D HEC 104 A 1 HETATM 43 O O2D HEC . . . C 3 4.492 14.862 18.393 1 11.51 ? O2D HEC 104 A 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 43 #