data_1CSV # _model_server_result.job_id hYpv5lvnAAaW15WyahNzTw _model_server_result.datetime_utc '2024-12-26 12:28:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1csv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":104}' # _entry.id 1CSV # _exptl.entry_id 1CSV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 618.503 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEME C' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1CSV _cell.length_a 36.55 _cell.length_b 36.55 _cell.length_c 138.24 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CSV _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 19 A CYS 14 1_555 C CAB HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.732 ? covale ? covale2 A SG CYS 22 A CYS 17 1_555 C CAC HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.807 ? covale ? covale3 A C PRO 76 A PRO 71 1_555 A N M3L 77 A M3L 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.352 ? covale ? covale4 A C M3L 77 A M3L 72 1_555 A N LYS 78 A LYS 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.306 ? metalc ? metalc1 A NE2 HIS 23 A HIS 18 1_555 C FE HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? metalc ? metalc2 A SD MET 85 A MET 80 1_555 C FE HEC . A HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? # _chem_comp.formula 'C34 H34 Fe N4 O4' _chem_comp.formula_weight 618.503 _chem_comp.id HEC _chem_comp.mon_nstd_flag . _chem_comp.name 'HEME C' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1CSV _atom_sites.fract_transf_matrix[1][1] 0.02736 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02736 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007234 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 117 117 SO4 SO4 . C 3 HEC A 1 104 104 HEC HEM . D 4 HOH A 1 107 107 HOH HOH . D 4 HOH A 2 109 109 HOH HOH . D 4 HOH A 3 110 110 HOH HOH . D 4 HOH A 4 112 112 HOH HOH . D 4 HOH A 5 113 113 HOH HOH . D 4 HOH A 6 116 116 HOH HOH . D 4 HOH A 7 118 118 HOH HOH . D 4 HOH A 8 121 121 HOH HOH . D 4 HOH A 9 122 122 HOH HOH . D 4 HOH A 10 124 124 HOH HOH . D 4 HOH A 11 133 133 HOH HOH . D 4 HOH A 12 135 135 HOH HOH . D 4 HOH A 13 136 136 HOH HOH . D 4 HOH A 14 137 137 HOH HOH . D 4 HOH A 15 142 142 HOH HOH . D 4 HOH A 16 143 143 HOH HOH . D 4 HOH A 17 145 145 HOH HOH . D 4 HOH A 18 148 148 HOH HOH . D 4 HOH A 19 152 152 HOH HOH . D 4 HOH A 20 153 153 HOH HOH . D 4 HOH A 21 154 154 HOH HOH . D 4 HOH A 22 156 156 HOH HOH . D 4 HOH A 23 158 158 HOH HOH . D 4 HOH A 24 160 160 HOH HOH . D 4 HOH A 25 163 163 HOH HOH . D 4 HOH A 26 165 165 HOH HOH . D 4 HOH A 27 166 166 HOH HOH . D 4 HOH A 28 167 167 HOH HOH . D 4 HOH A 29 168 168 HOH HOH . D 4 HOH A 30 172 172 HOH HOH . D 4 HOH A 31 174 174 HOH HOH . D 4 HOH A 32 175 175 HOH HOH . D 4 HOH A 33 181 181 HOH HOH . D 4 HOH A 34 182 182 HOH HOH . D 4 HOH A 35 185 185 HOH HOH . D 4 HOH A 36 186 186 HOH HOH . D 4 HOH A 37 188 188 HOH HOH . D 4 HOH A 38 189 189 HOH HOH . D 4 HOH A 39 191 191 HOH HOH . D 4 HOH A 40 194 194 HOH HOH . D 4 HOH A 41 195 195 HOH HOH . D 4 HOH A 42 196 196 HOH HOH . D 4 HOH A 43 201 201 HOH HOH . D 4 HOH A 44 204 204 HOH HOH . D 4 HOH A 45 205 205 HOH HOH . D 4 HOH A 46 208 208 HOH HOH . D 4 HOH A 47 214 214 HOH HOH . D 4 HOH A 48 215 215 HOH HOH . D 4 HOH A 49 217 217 HOH HOH . D 4 HOH A 50 219 219 HOH HOH . D 4 HOH A 51 222 222 HOH HOH . D 4 HOH A 52 225 225 HOH HOH . D 4 HOH A 53 229 229 HOH HOH . D 4 HOH A 54 230 230 HOH HOH . D 4 HOH A 55 232 232 HOH HOH . D 4 HOH A 56 233 233 HOH HOH . D 4 HOH A 57 234 234 HOH HOH . D 4 HOH A 58 236 236 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE HEC . . . C 3 2.57 21.018 13.28 1 7.55 ? FE HEC 104 A 1 HETATM 2 C CHA HEC . . . C 3 4.787 18.615 14.379 1 5.26 ? CHA HEC 104 A 1 HETATM 3 C CHB HEC . . . C 3 3.828 20.697 10.135 1 4 ? CHB HEC 104 A 1 HETATM 4 C CHC HEC . . . C 3 -0.076 22.789 12.077 1 6.5 ? CHC HEC 104 A 1 HETATM 5 C CHD HEC . . . C 3 1.664 21.644 16.457 1 9.19 ? CHD HEC 104 A 1 HETATM 6 N NA HEC . . . C 3 4.022 19.905 12.457 1 5.56 ? NA HEC 104 A 1 HETATM 7 C C1A HEC . . . C 3 4.82 18.913 13.035 1 4 ? C1A HEC 104 A 1 HETATM 8 C C2A HEC . . . C 3 5.64 18.268 11.985 1 4.34 ? C2A HEC 104 A 1 HETATM 9 C C3A HEC . . . C 3 5.347 18.89 10.84 1 4.79 ? C3A HEC 104 A 1 HETATM 10 C C4A HEC . . . C 3 4.316 19.874 11.086 1 4 ? C4A HEC 104 A 1 HETATM 11 C CMA HEC . . . C 3 5.836 18.693 9.363 1 5.09 ? CMA HEC 104 A 1 HETATM 12 C CAA HEC . . . C 3 6.663 17.144 12.219 1 4 ? CAA HEC 104 A 1 HETATM 13 C CBA HEC . . . C 3 8.027 17.747 12.659 1 4.25 ? CBA HEC 104 A 1 HETATM 14 C CGA HEC . . . C 3 9.245 16.918 12.571 1 4.02 ? CGA HEC 104 A 1 HETATM 15 O O1A HEC . . . C 3 10.352 17.476 12.801 1 4.07 ? O1A HEC 104 A 1 HETATM 16 O O2A HEC . . . C 3 9.132 15.637 12.395 1 7.24 ? O2A HEC 104 A 1 HETATM 17 N NB HEC . . . C 3 1.939 21.577 11.447 1 4 ? NB HEC 104 A 1 HETATM 18 C C1B HEC . . . C 3 2.712 21.483 10.329 1 5.93 ? C1B HEC 104 A 1 HETATM 19 C C2B HEC . . . C 3 2.025 22.223 9.223 1 4 ? C2B HEC 104 A 1 HETATM 20 C C3B HEC . . . C 3 0.969 22.783 9.758 1 4 ? C3B HEC 104 A 1 HETATM 21 C C4B HEC . . . C 3 0.883 22.365 11.158 1 4 ? C4B HEC 104 A 1 HETATM 22 C CMB HEC . . . C 3 2.668 22.244 7.803 1 4 ? CMB HEC 104 A 1 HETATM 23 C CAB HEC . . . C 3 -0.138 23.622 9.164 1 4 ? CAB HEC 104 A 1 HETATM 24 C CBB HEC . . . C 3 -1.329 22.784 8.677 1 4 ? CBB HEC 104 A 1 HETATM 25 N NC HEC . . . C 3 1.064 21.994 14.116 1 8.24 ? NC HEC 104 A 1 HETATM 26 C C1C HEC . . . C 3 0.128 22.779 13.463 1 10.27 ? C1C HEC 104 A 1 HETATM 27 C C2C HEC . . . C 3 -0.512 23.629 14.422 1 11.92 ? C2C HEC 104 A 1 HETATM 28 C C3C HEC . . . C 3 -0.06 23.281 15.643 1 12.8 ? C3C HEC 104 A 1 HETATM 29 C C4C HEC . . . C 3 0.951 22.268 15.46 1 10.78 ? C4C HEC 104 A 1 HETATM 30 C CMC HEC . . . C 3 -1.616 24.65 14.066 1 15.11 ? CMC HEC 104 A 1 HETATM 31 C CAC HEC . . . C 3 -0.433 23.888 17.003 1 13.13 ? CAC HEC 104 A 1 HETATM 32 C CBC HEC . . . C 3 -1.889 23.814 17.455 1 13.63 ? CBC HEC 104 A 1 HETATM 33 N ND HEC . . . C 3 3.118 20.274 15.103 1 6.72 ? ND HEC 104 A 1 HETATM 34 C C1D HEC . . . C 3 2.605 20.681 16.305 1 7.52 ? C1D HEC 104 A 1 HETATM 35 C C2D HEC . . . C 3 3.273 19.93 17.374 1 8.56 ? C2D HEC 104 A 1 HETATM 36 C C3D HEC . . . C 3 4.145 19.127 16.795 1 7.51 ? C3D HEC 104 A 1 HETATM 37 C C4D HEC . . . C 3 4.062 19.322 15.329 1 7.15 ? C4D HEC 104 A 1 HETATM 38 C CMD HEC . . . C 3 2.991 20.068 18.894 1 6.4 ? CMD HEC 104 A 1 HETATM 39 C CAD HEC . . . C 3 5.079 18.07 17.435 1 7.63 ? CAD HEC 104 A 1 HETATM 40 C CBD HEC . . . C 3 4.485 16.671 17.581 1 7.19 ? CBD HEC 104 A 1 HETATM 41 C CGD HEC . . . C 3 5.104 15.777 18.611 1 8.3 ? CGD HEC 104 A 1 HETATM 42 O O1D HEC . . . C 3 6.224 16.112 19.098 1 9.11 ? O1D HEC 104 A 1 HETATM 43 O O2D HEC . . . C 3 4.426 14.765 18.899 1 10.37 ? O2D HEC 104 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 359 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 43 #