data_1CV6 # _model_server_result.job_id TgFbBdjsY0XdHG6p3pX7hQ _model_server_result.datetime_utc '2024-11-27 03:27:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1cv6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":170}' # _entry.id 1CV6 # _exptl.entry_id 1CV6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 154.251 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-HYDROXYETHYL DISULFIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1CV6 _cell.length_a 60.87 _cell.length_b 60.87 _cell.length_c 97.25 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CV6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H10 O2 S2' _chem_comp.formula_weight 154.251 _chem_comp.id HED _chem_comp.mon_nstd_flag . _chem_comp.name '2-HYDROXYETHYL DISULFIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 HED sing 129 n n C1 C2 HED sing 130 n n C1 H11 HED sing 131 n n C1 H12 HED sing 132 n n O1 HO1 HED sing 133 n n C2 S3 HED sing 134 n n C2 H21 HED sing 135 n n C2 H22 HED sing 136 n n S3 S4 HED sing 137 n n S4 C5 HED sing 138 n n C5 C6 HED sing 139 n n C5 H51 HED sing 140 n n C5 H52 HED sing 141 n n C6 O6 HED sing 142 n n C6 H61 HED sing 143 n n C6 H62 HED sing 144 n n O6 HO6 HED sing 145 n n # _atom_sites.entry_id 1CV6 _atom_sites.fract_transf_matrix[1][1] 0.016428 _atom_sites.fract_transf_matrix[1][2] 0.009485 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01897 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010283 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 173 0 CL CL . C 2 CL A 1 178 0 CL CL . D 3 HED A 1 170 0 HED HED . E 4 HOH A 1 171 0 HOH HOH . E 4 HOH A 2 172 0 HOH HOH . E 4 HOH A 3 174 0 HOH HOH . E 4 HOH A 4 175 0 HOH HOH . E 4 HOH A 5 176 0 HOH HOH . E 4 HOH A 6 177 0 HOH HOH . E 4 HOH A 7 179 0 HOH HOH . E 4 HOH A 8 180 0 HOH HOH . E 4 HOH A 9 181 0 HOH HOH . E 4 HOH A 10 182 0 HOH HOH . E 4 HOH A 11 183 0 HOH HOH . E 4 HOH A 12 184 0 HOH HOH . E 4 HOH A 13 185 0 HOH HOH . E 4 HOH A 14 186 0 HOH HOH . E 4 HOH A 15 187 0 HOH HOH . E 4 HOH A 16 188 0 HOH HOH . E 4 HOH A 17 189 0 HOH HOH . E 4 HOH A 18 190 0 HOH HOH . E 4 HOH A 19 191 0 HOH HOH . E 4 HOH A 20 192 0 HOH HOH . E 4 HOH A 21 193 0 HOH HOH . E 4 HOH A 22 194 0 HOH HOH . E 4 HOH A 23 195 0 HOH HOH . E 4 HOH A 24 196 0 HOH HOH . E 4 HOH A 25 197 0 HOH HOH . E 4 HOH A 26 198 0 HOH HOH . E 4 HOH A 27 200 0 HOH HOH . E 4 HOH A 28 201 0 HOH HOH . E 4 HOH A 29 202 0 HOH HOH . E 4 HOH A 30 203 0 HOH HOH . E 4 HOH A 31 204 0 HOH HOH . E 4 HOH A 32 206 0 HOH HOH . E 4 HOH A 33 207 0 HOH HOH . E 4 HOH A 34 208 0 HOH HOH . E 4 HOH A 35 209 0 HOH HOH . E 4 HOH A 36 210 0 HOH HOH . E 4 HOH A 37 211 0 HOH HOH . E 4 HOH A 38 213 0 HOH HOH . E 4 HOH A 39 214 0 HOH HOH . E 4 HOH A 40 215 0 HOH HOH . E 4 HOH A 41 216 0 HOH HOH . E 4 HOH A 42 217 0 HOH HOH . E 4 HOH A 43 218 0 HOH HOH . E 4 HOH A 44 219 0 HOH HOH . E 4 HOH A 45 220 0 HOH HOH . E 4 HOH A 46 221 0 HOH HOH . E 4 HOH A 47 222 0 HOH HOH . E 4 HOH A 48 223 0 HOH HOH . E 4 HOH A 49 224 0 HOH HOH . E 4 HOH A 50 225 0 HOH HOH . E 4 HOH A 51 227 0 HOH HOH . E 4 HOH A 52 228 0 HOH HOH . E 4 HOH A 53 229 0 HOH HOH . E 4 HOH A 54 230 0 HOH HOH . E 4 HOH A 55 231 0 HOH HOH . E 4 HOH A 56 232 0 HOH HOH . E 4 HOH A 57 235 0 HOH HOH . E 4 HOH A 58 236 0 HOH HOH . E 4 HOH A 59 237 0 HOH HOH . E 4 HOH A 60 238 0 HOH HOH . E 4 HOH A 61 239 0 HOH HOH . E 4 HOH A 62 240 0 HOH HOH . E 4 HOH A 63 242 0 HOH HOH . E 4 HOH A 64 244 0 HOH HOH . E 4 HOH A 65 245 0 HOH HOH . E 4 HOH A 66 246 0 HOH HOH . E 4 HOH A 67 247 0 HOH HOH . E 4 HOH A 68 248 0 HOH HOH . E 4 HOH A 69 249 0 HOH HOH . E 4 HOH A 70 250 0 HOH HOH . E 4 HOH A 71 251 0 HOH HOH . E 4 HOH A 72 253 0 HOH HOH . E 4 HOH A 73 254 0 HOH HOH . E 4 HOH A 74 256 0 HOH HOH . E 4 HOH A 75 257 0 HOH HOH . E 4 HOH A 76 259 0 HOH HOH . E 4 HOH A 77 260 0 HOH HOH . E 4 HOH A 78 261 0 HOH HOH . E 4 HOH A 79 265 0 HOH HOH . E 4 HOH A 80 267 0 HOH HOH . E 4 HOH A 81 268 0 HOH HOH . E 4 HOH A 82 269 0 HOH HOH . E 4 HOH A 83 270 0 HOH HOH . E 4 HOH A 84 271 0 HOH HOH . E 4 HOH A 85 272 0 HOH HOH . E 4 HOH A 86 273 0 HOH HOH . E 4 HOH A 87 274 0 HOH HOH . E 4 HOH A 88 276 0 HOH HOH . E 4 HOH A 89 277 0 HOH HOH . E 4 HOH A 90 278 0 HOH HOH . E 4 HOH A 91 280 0 HOH HOH . E 4 HOH A 92 281 0 HOH HOH . E 4 HOH A 93 282 0 HOH HOH . E 4 HOH A 94 283 0 HOH HOH . E 4 HOH A 95 284 0 HOH HOH . E 4 HOH A 96 285 0 HOH HOH . E 4 HOH A 97 286 0 HOH HOH . E 4 HOH A 98 288 0 HOH HOH . E 4 HOH A 99 289 0 HOH HOH . E 4 HOH A 100 290 0 HOH HOH . E 4 HOH A 101 291 0 HOH HOH . E 4 HOH A 102 292 0 HOH HOH . E 4 HOH A 103 293 0 HOH HOH . E 4 HOH A 104 294 0 HOH HOH . E 4 HOH A 105 295 0 HOH HOH . E 4 HOH A 106 296 0 HOH HOH . E 4 HOH A 107 297 0 HOH HOH . E 4 HOH A 108 298 0 HOH HOH . E 4 HOH A 109 299 0 HOH HOH . E 4 HOH A 110 300 0 HOH HOH . E 4 HOH A 111 301 0 HOH HOH . E 4 HOH A 112 302 0 HOH HOH . E 4 HOH A 113 303 0 HOH HOH . E 4 HOH A 114 304 0 HOH HOH . E 4 HOH A 115 306 0 HOH HOH . E 4 HOH A 116 307 0 HOH HOH . E 4 HOH A 117 308 0 HOH HOH . E 4 HOH A 118 309 0 HOH HOH . E 4 HOH A 119 311 0 HOH HOH . E 4 HOH A 120 312 0 HOH HOH . E 4 HOH A 121 313 0 HOH HOH . E 4 HOH A 122 314 0 HOH HOH . E 4 HOH A 123 319 0 HOH HOH . E 4 HOH A 124 321 0 HOH HOH . E 4 HOH A 125 322 0 HOH HOH . E 4 HOH A 126 323 0 HOH HOH . E 4 HOH A 127 324 0 HOH HOH . E 4 HOH A 128 325 0 HOH HOH . E 4 HOH A 129 326 0 HOH HOH . E 4 HOH A 130 327 0 HOH HOH . E 4 HOH A 131 328 0 HOH HOH . E 4 HOH A 132 329 0 HOH HOH . E 4 HOH A 133 330 0 HOH HOH . E 4 HOH A 134 331 0 HOH HOH . E 4 HOH A 135 332 0 HOH HOH . E 4 HOH A 136 333 0 HOH HOH . E 4 HOH A 137 334 0 HOH HOH . E 4 HOH A 138 335 0 HOH HOH . E 4 HOH A 139 336 0 HOH HOH . E 4 HOH A 140 337 0 HOH HOH . E 4 HOH A 141 338 0 HOH HOH . E 4 HOH A 142 339 0 HOH HOH . E 4 HOH A 143 340 0 HOH HOH . E 4 HOH A 144 341 0 HOH HOH . E 4 HOH A 145 342 0 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HED . . . D 3 31.817 -1.361 15.396 1 35.09 ? C1 HED 170 A 1 HETATM 2 O O1 HED . . . D 3 33.035 -0.954 16.004 1 60.8 ? O1 HED 170 A 1 HETATM 3 C C2 HED . . . D 3 31.843 -0.857 13.976 1 30.7 ? C2 HED 170 A 1 HETATM 4 S S3 HED . . . D 3 33.45 -1.237 13.255 1 55.94 ? S3 HED 170 A 1 HETATM 5 S S4 HED . . . D 3 33.158 -1.012 11.224 1 100 ? S4 HED 170 A 1 HETATM 6 C C5 HED . . . D 3 33.665 -2.576 10.463 1 100 ? C5 HED 170 A 1 HETATM 7 C C6 HED . . . D 3 34.516 -2.354 9.198 1 59.09 ? C6 HED 170 A 1 HETATM 8 O O6 HED . . . D 3 35.523 -3.342 9.131 1 100 ? O6 HED 170 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 8 #