data_1CV8
#
_model_server_result.job_id            UkgsMZy2FF_4wotNJGjYTg 
_model_server_result.datetime_utc      '2024-11-07 22:49:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1cv8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":176}' 
#
_entry.id    1CV8 
#
_exptl.entry_id    1CV8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              360.429 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1CV8 
_cell.length_a            61.139 
_cell.length_b            61.139 
_cell.length_c            195.063 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1CV8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 12_564 x,x-y+1,-z-1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -30.5695 52.947927 -32.5105 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             24 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              24 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            C 
_struct_conn.ptnr2_label_atom_id            C2 
_struct_conn.ptnr2_label_comp_id            E64 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             E64 
_struct_conn.ptnr2_auth_seq_id              176 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.891 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C15 H30 N5 O5 1' 
_chem_comp.formula_weight    360.429 
_chem_comp.id                E64 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 E64 doub 89 n n 
C1 O2 E64 sing 90 n n 
C1 C2 E64 sing 91 n n 
O2 HO2 E64 sing 92 n n 
C2 C3 E64 sing 93 n n 
C2 H21 E64 sing 94 n n 
C2 H22 E64 sing 95 n n 
C3 O3 E64 sing 96 n n 
C3 C4 E64 sing 97 n n 
C3 H3 E64 sing 98 n n 
O3 HO3 E64 sing 99 n n 
C4 O4 E64 doub 100 n n 
C4 N1 E64 sing 101 n n 
N1 C6 E64 sing 102 n n 
N1 HN1 E64 sing 103 n n 
C6 C7 E64 sing 104 n n 
C6 C11 E64 sing 105 n n 
C6 H6 E64 sing 106 n n 
C7 C8 E64 sing 107 n n 
C7 H71 E64 sing 108 n n 
C7 H72 E64 sing 109 n n 
C8 C9 E64 sing 110 n n 
C8 C10 E64 sing 111 n n 
C8 H8 E64 sing 112 n n 
C9 H91 E64 sing 113 n n 
C9 H92 E64 sing 114 n n 
C9 H93 E64 sing 115 n n 
C10 H101 E64 sing 116 n n 
C10 H102 E64 sing 117 n n 
C10 H103 E64 sing 118 n n 
C11 O5 E64 doub 119 n n 
C11 N2 E64 sing 120 n n 
N2 C12 E64 sing 121 n n 
N2 HN2 E64 sing 122 n n 
C12 C13 E64 sing 123 n n 
C12 H121 E64 sing 124 n n 
C12 H122 E64 sing 125 n n 
C13 C14 E64 sing 126 n n 
C13 H131 E64 sing 127 n n 
C13 H132 E64 sing 128 n n 
C14 C15 E64 sing 129 n n 
C14 H141 E64 sing 130 n n 
C14 H142 E64 sing 131 n n 
C15 N3 E64 sing 132 n n 
C15 H151 E64 sing 133 n n 
C15 H152 E64 sing 134 n n 
N3 C16 E64 sing 135 n n 
N3 HN3 E64 sing 136 n n 
C16 N4 E64 sing 137 n n 
C16 N5 E64 doub 138 n n 
N4 HN41 E64 sing 139 n n 
N4 HN42 E64 sing 140 n n 
N5 HN51 E64 sing 141 n n 
N5 HN52 E64 sing 142 n n 
#
_atom_sites.entry_id                     1CV8 
_atom_sites.fract_transf_matrix[1][1]    0.016356 
_atom_sites.fract_transf_matrix[1][2]    0.009443 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018886 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005127 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ACT A 1 175 1 ACT ACT . 
C 3 E64 A 1 176 175 E64 E64 . 
D 4 HOH A 1 177 2 HOH HOH . 
D 4 HOH A 2 178 3 HOH HOH . 
D 4 HOH A 3 179 4 HOH HOH . 
D 4 HOH A 4 180 5 HOH HOH . 
D 4 HOH A 5 181 6 HOH HOH . 
D 4 HOH A 6 182 7 HOH HOH . 
D 4 HOH A 7 183 8 HOH HOH . 
D 4 HOH A 8 184 9 HOH HOH . 
D 4 HOH A 9 185 10 HOH HOH . 
D 4 HOH A 10 186 11 HOH HOH . 
D 4 HOH A 11 187 12 HOH HOH . 
D 4 HOH A 12 188 13 HOH HOH . 
D 4 HOH A 13 189 14 HOH HOH . 
D 4 HOH A 14 190 15 HOH HOH . 
D 4 HOH A 15 191 16 HOH HOH . 
D 4 HOH A 16 192 17 HOH HOH . 
D 4 HOH A 17 193 18 HOH HOH . 
D 4 HOH A 18 194 19 HOH HOH . 
D 4 HOH A 19 195 20 HOH HOH . 
D 4 HOH A 20 196 21 HOH HOH . 
D 4 HOH A 21 197 22 HOH HOH . 
D 4 HOH A 22 198 23 HOH HOH . 
D 4 HOH A 23 199 24 HOH HOH . 
D 4 HOH A 24 200 25 HOH HOH . 
D 4 HOH A 25 201 26 HOH HOH . 
D 4 HOH A 26 202 27 HOH HOH . 
D 4 HOH A 27 203 28 HOH HOH . 
D 4 HOH A 28 204 29 HOH HOH . 
D 4 HOH A 29 205 30 HOH HOH . 
D 4 HOH A 30 206 31 HOH HOH . 
D 4 HOH A 31 207 32 HOH HOH . 
D 4 HOH A 32 208 33 HOH HOH . 
D 4 HOH A 33 209 34 HOH HOH . 
D 4 HOH A 34 210 35 HOH HOH . 
D 4 HOH A 35 211 36 HOH HOH . 
D 4 HOH A 36 212 37 HOH HOH . 
D 4 HOH A 37 213 38 HOH HOH . 
D 4 HOH A 38 214 39 HOH HOH . 
D 4 HOH A 39 215 40 HOH HOH . 
D 4 HOH A 40 216 41 HOH HOH . 
D 4 HOH A 41 217 42 HOH HOH . 
D 4 HOH A 42 218 43 HOH HOH . 
D 4 HOH A 43 219 44 HOH HOH . 
D 4 HOH A 44 220 45 HOH HOH . 
D 4 HOH A 45 221 46 HOH HOH . 
D 4 HOH A 46 222 47 HOH HOH . 
D 4 HOH A 47 223 48 HOH HOH . 
D 4 HOH A 48 224 49 HOH HOH . 
D 4 HOH A 49 225 50 HOH HOH . 
D 4 HOH A 50 226 51 HOH HOH . 
D 4 HOH A 51 227 52 HOH HOH . 
D 4 HOH A 52 228 53 HOH HOH . 
D 4 HOH A 53 229 54 HOH HOH . 
D 4 HOH A 54 230 55 HOH HOH . 
D 4 HOH A 55 231 56 HOH HOH . 
D 4 HOH A 56 232 57 HOH HOH . 
D 4 HOH A 57 233 58 HOH HOH . 
D 4 HOH A 58 234 59 HOH HOH . 
D 4 HOH A 59 235 60 HOH HOH . 
D 4 HOH A 60 236 61 HOH HOH . 
D 4 HOH A 61 237 62 HOH HOH . 
D 4 HOH A 62 238 63 HOH HOH . 
D 4 HOH A 63 239 64 HOH HOH . 
D 4 HOH A 64 240 65 HOH HOH . 
D 4 HOH A 65 241 66 HOH HOH . 
D 4 HOH A 66 242 67 HOH HOH . 
D 4 HOH A 67 243 68 HOH HOH . 
D 4 HOH A 68 244 69 HOH HOH . 
D 4 HOH A 69 245 70 HOH HOH . 
D 4 HOH A 70 246 71 HOH HOH . 
D 4 HOH A 71 247 72 HOH HOH . 
D 4 HOH A 72 248 73 HOH HOH . 
D 4 HOH A 73 249 74 HOH HOH . 
D 4 HOH A 74 250 75 HOH HOH . 
D 4 HOH A 75 251 76 HOH HOH . 
D 4 HOH A 76 252 77 HOH HOH . 
D 4 HOH A 77 253 78 HOH HOH . 
D 4 HOH A 78 254 79 HOH HOH . 
D 4 HOH A 79 255 80 HOH HOH . 
D 4 HOH A 80 256 81 HOH HOH . 
D 4 HOH A 81 257 82 HOH HOH . 
D 4 HOH A 82 258 83 HOH HOH . 
D 4 HOH A 83 259 84 HOH HOH . 
D 4 HOH A 84 260 85 HOH HOH . 
D 4 HOH A 85 261 86 HOH HOH . 
D 4 HOH A 86 262 87 HOH HOH . 
D 4 HOH A 87 263 88 HOH HOH . 
D 4 HOH A 88 264 89 HOH HOH . 
D 4 HOH A 89 265 90 HOH HOH . 
D 4 HOH A 90 266 91 HOH HOH . 
D 4 HOH A 91 267 92 HOH HOH . 
D 4 HOH A 92 268 93 HOH HOH . 
D 4 HOH A 93 269 94 HOH HOH . 
D 4 HOH A 94 270 95 HOH HOH . 
D 4 HOH A 95 271 96 HOH HOH . 
D 4 HOH A 96 272 97 HOH HOH . 
D 4 HOH A 97 273 98 HOH HOH . 
D 4 HOH A 98 274 99 HOH HOH . 
D 4 HOH A 99 275 100 HOH HOH . 
D 4 HOH A 100 276 101 HOH HOH . 
D 4 HOH A 101 277 102 HOH HOH . 
D 4 HOH A 102 278 103 HOH HOH . 
D 4 HOH A 103 279 104 HOH HOH . 
D 4 HOH A 104 280 105 HOH HOH . 
D 4 HOH A 105 281 106 HOH HOH . 
D 4 HOH A 106 282 107 HOH HOH . 
D 4 HOH A 107 283 108 HOH HOH . 
D 4 HOH A 108 284 109 HOH HOH . 
D 4 HOH A 109 285 110 HOH HOH . 
D 4 HOH A 110 286 111 HOH HOH . 
D 4 HOH A 111 287 112 HOH HOH . 
D 4 HOH A 112 288 113 HOH HOH . 
D 4 HOH A 113 289 114 HOH HOH . 
D 4 HOH A 114 290 115 HOH HOH . 
D 4 HOH A 115 291 116 HOH HOH . 
D 4 HOH A 116 292 117 HOH HOH . 
D 4 HOH A 117 293 118 HOH HOH . 
D 4 HOH A 118 294 119 HOH HOH . 
D 4 HOH A 119 295 120 HOH HOH . 
D 4 HOH A 120 296 121 HOH HOH . 
D 4 HOH A 121 297 122 HOH HOH . 
D 4 HOH A 122 298 123 HOH HOH . 
D 4 HOH A 123 299 124 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 E64 . . . C 3 -15.07 18.015 -1.025 1 17.43 ? C1 E64 176 A 1 
HETATM 2 O O1 E64 . . . C 3 -15.939 18.559 -1.816 1 14.19 ? O1 E64 176 A 1 
HETATM 3 O O2 E64 . . . C 3 -14.389 18.67 -0.277 1 15.06 ? O2 E64 176 A 1 
HETATM 4 C C2 E64 . . . C 3 -14.753 16.578 -1.376 1 15.74 ? C2 E64 176 A 1 
HETATM 5 C C3 E64 . . . C 3 -16.089 15.711 -1.469 1 17.86 ? C3 E64 176 A 1 
HETATM 6 O O3 E64 . . . C 3 -16.695 15.763 -0.265 1 17.76 ? O3 E64 176 A 1 
HETATM 7 C C4 E64 . . . C 3 -15.755 14.306 -2.004 1 18.36 ? C4 E64 176 A 1 
HETATM 8 O O4 E64 . . . C 3 -15.849 13.874 -3.191 1 15.24 ? O4 E64 176 A 1 
HETATM 9 N N1 E64 . . . C 3 -15.35 13.466 -1.035 1 17.16 ? N1 E64 176 A 1 
HETATM 10 C C6 E64 . . . C 3 -15.08 12.096 -1.183 1 20.41 ? C6 E64 176 A 1 
HETATM 11 C C7 E64 . . . C 3 -13.677 11.686 -0.975 1 20.98 ? C7 E64 176 A 1 
HETATM 12 C C8 E64 . . . C 3 -12.54 12.178 -1.763 1 20.88 ? C8 E64 176 A 1 
HETATM 13 C C9 E64 . . . C 3 -11.227 11.651 -1.038 1 18.17 ? C9 E64 176 A 1 
HETATM 14 C C10 E64 . . . C 3 -12.799 11.595 -3.204 1 21.06 ? C10 E64 176 A 1 
HETATM 15 C C11 E64 . . . C 3 -15.91 11.15 -0.305 1 26.16 ? C11 E64 176 A 1 
HETATM 16 O O5 E64 . . . C 3 -16.304 11.692 0.714 1 26.87 ? O5 E64 176 A 1 
HETATM 17 N N2 E64 . . . C 3 -16.523 10.151 -0.879 1 25.4 ? N2 E64 176 A 1 
HETATM 18 C C12 E64 . . . C 3 -17.736 9.516 -0.429 1 31.41 ? C12 E64 176 A 1 
HETATM 19 C C13 E64 . . . C 3 -18.759 10.41 -1.098 1 36.21 ? C13 E64 176 A 1 
HETATM 20 C C14 E64 . . . C 3 -19.712 9.461 -1.733 1 37.19 ? C14 E64 176 A 1 
HETATM 21 C C15 E64 . . . C 3 -20.946 10.293 -2.055 1 40.66 ? C15 E64 176 A 1 
HETATM 22 N N3 E64 . . . C 3 -21.787 9.22 -2.578 1 43.19 ? N3 E64 176 A 1 
HETATM 23 C C16 E64 . . . C 3 -21.958 8.611 -3.924 1 44.28 ? C16 E64 176 A 1 
HETATM 24 N N4 E64 . . . C 3 -22.921 7.647 -3.793 1 45.06 ? N4 E64 176 A 1 
HETATM 25 N N5 E64 . . . C 3 -21.439 8.931 -5.226 1 42.26 ? N5 E64 176 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           318 
_model_server_stats.encode_time_ms          14 
_model_server_stats.element_count           25 
#