data_1CWQ
#
_model_server_result.job_id            C5HfFyd-ZSqTuKJPTDt1MA 
_model_server_result.datetime_utc      '2024-10-18 19:23:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1cwq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"JA","auth_seq_id":621}' 
#
_entry.id    1CWQ 
#
_exptl.entry_id    1CWQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              114.229 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-OCTANE 
_entity.pdbx_number_of_molecules    16 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1CWQ 
_cell.length_a            61.08 
_cell.length_b            61.08 
_cell.length_c            110.4 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1CWQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        173 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 63' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 30.54 52.896832 0 
3 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -30.54 52.896832 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 J N N 
? 4 L N N 
? 4 O N N 
? 4 U N N 
? 4 V N N 
? 4 X N N 
? 4 AA N N 
? 4 BA N N 
? 4 DA N N 
? 4 HA N N 
? 4 JA N N 
? 4 LA N N 
? 4 MA N N 
? 4 OA N N 
? 4 RA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A NZ LYS 217 A LYS 216 1_555 C C15 RET . A RET 601 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.37 ? 
covale ? covale2 B NZ LYS 217 B LYS 216 1_555 Z C15 RET . B RET 601 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.357 ? 
#
_chem_comp.formula           'C8 H18' 
_chem_comp.formula_weight    114.229 
_chem_comp.id                OCT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-OCTANE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 OCT sing 222 n n 
C1 H11 OCT sing 223 n n 
C1 H12 OCT sing 224 n n 
C1 H13 OCT sing 225 n n 
C2 C3 OCT sing 226 n n 
C2 H21 OCT sing 227 n n 
C2 H22 OCT sing 228 n n 
C3 C4 OCT sing 229 n n 
C3 H31 OCT sing 230 n n 
C3 H32 OCT sing 231 n n 
C4 C5 OCT sing 232 n n 
C4 H41 OCT sing 233 n n 
C4 H42 OCT sing 234 n n 
C5 C6 OCT sing 235 n n 
C5 H51 OCT sing 236 n n 
C5 H52 OCT sing 237 n n 
C6 C7 OCT sing 238 n n 
C6 H61 OCT sing 239 n n 
C6 H62 OCT sing 240 n n 
C7 C8 OCT sing 241 n n 
C7 H71 OCT sing 242 n n 
C7 H72 OCT sing 243 n n 
C8 H81 OCT sing 244 n n 
C8 H82 OCT sing 245 n n 
C8 H83 OCT sing 246 n n 
#
_atom_sites.entry_id                     1CWQ 
_atom_sites.fract_transf_matrix[1][1]    0.016372 
_atom_sites.fract_transf_matrix[1][2]    0.009452 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018905 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009058 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 RET A 1 601 601 RET RET . 
D 3 UND A 1 604 604 UND UND . 
E 4 OCT A 1 605 605 OCT OCT . 
F 5 HEX A 1 606 606 HEX HEX . 
G 5 HEX A 1 608 608 HEX HEX . 
H 5 HEX A 1 610 610 HEX HEX . 
I 6 TRD A 1 612 612 TRD TRD . 
J 4 OCT A 1 617 617 OCT OCT . 
K 5 HEX A 1 620 620 HEX HEX . 
L 4 OCT A 1 623 623 OCT OCT . 
M 3 UND A 1 624 624 UND UND . 
N 3 UND A 1 1604 1604 UND UND . 
O 4 OCT A 1 1605 1605 OCT OCT . 
P 5 HEX A 1 1606 1606 HEX HEX . 
Q 5 HEX A 1 1608 1608 HEX HEX . 
R 5 HEX A 1 1610 1610 HEX HEX . 
S 6 TRD A 1 1612 1612 TRD TRD . 
T 6 TRD A 1 1615 1615 TRD TRD . 
U 4 OCT A 1 1617 1617 OCT OCT . 
V 4 OCT A 1 1621 1621 OCT OCT . 
W 5 HEX A 1 1622 1622 HEX HEX . 
X 4 OCT A 1 1623 1623 OCT OCT . 
Y 3 UND A 1 1624 1624 UND UND . 
Z 2 RET B 1 601 601 RET RET . 
AA 4 OCT B 1 607 607 OCT OCT . 
BA 4 OCT B 1 609 609 OCT OCT . 
CA 6 TRD B 1 611 611 TRD TRD . 
DA 4 OCT B 1 613 613 OCT OCT . 
EA 3 UND B 1 614 614 UND UND . 
FA 6 TRD B 1 615 615 TRD TRD . 
GA 3 UND B 1 616 616 UND UND . 
HA 4 OCT B 1 618 618 OCT OCT . 
IA 5 HEX B 1 619 619 HEX HEX . 
JA 4 OCT B 1 621 621 OCT OCT . 
KA 5 HEX B 1 622 622 HEX HEX . 
LA 4 OCT B 1 1607 1607 OCT OCT . 
MA 4 OCT B 1 1609 1609 OCT OCT . 
NA 6 TRD B 1 1611 1611 TRD TRD . 
OA 4 OCT B 1 1613 1613 OCT OCT . 
PA 3 UND B 1 1614 1614 UND UND . 
QA 3 UND B 1 1616 1616 UND UND . 
RA 4 OCT B 1 1618 1618 OCT OCT . 
SA 5 HEX B 1 1619 1619 HEX HEX . 
TA 5 HEX B 1 1620 1620 HEX HEX . 
UA 7 HOH A 1 714 714 HOH HOH . 
UA 7 HOH A 2 717 717 HOH HOH . 
UA 7 HOH A 3 720 720 HOH HOH . 
UA 7 HOH A 4 721 721 HOH HOH . 
UA 7 HOH A 5 722 722 HOH HOH . 
UA 7 HOH A 6 742 742 HOH HOH . 
UA 7 HOH A 7 743 743 HOH HOH . 
UA 7 HOH A 8 744 744 HOH HOH . 
UA 7 HOH A 9 801 801 HOH HOH . 
UA 7 HOH A 10 802 802 HOH HOH . 
UA 7 HOH A 11 804 804 HOH HOH . 
UA 7 HOH A 12 805 805 HOH HOH . 
UA 7 HOH A 13 808 808 HOH HOH . 
UA 7 HOH A 14 809 809 HOH HOH . 
UA 7 HOH A 15 810 810 HOH HOH . 
UA 7 HOH A 16 813 813 HOH HOH . 
UA 7 HOH A 17 815 815 HOH HOH . 
UA 7 HOH A 18 823 823 HOH HOH . 
UA 7 HOH A 19 825 825 HOH HOH . 
UA 7 HOH A 20 826 826 HOH HOH . 
UA 7 HOH A 21 829 829 HOH HOH . 
UA 7 HOH A 22 830 830 HOH HOH . 
UA 7 HOH A 23 831 831 HOH HOH . 
UA 7 HOH A 24 833 833 HOH HOH . 
UA 7 HOH A 25 834 834 HOH HOH . 
UA 7 HOH A 26 851 851 HOH HOH . 
UA 7 HOH A 27 852 852 HOH HOH . 
UA 7 HOH A 28 853 853 HOH HOH . 
UA 7 HOH A 29 854 854 HOH HOH . 
UA 7 HOH A 30 855 855 HOH HOH . 
UA 7 HOH A 31 856 856 HOH HOH . 
UA 7 HOH A 32 857 857 HOH HOH . 
UA 7 HOH A 33 859 859 HOH HOH . 
UA 7 HOH A 34 861 861 HOH HOH . 
UA 7 HOH A 35 862 862 HOH HOH . 
UA 7 HOH A 36 869 869 HOH HOH . 
UA 7 HOH A 37 870 870 HOH HOH . 
UA 7 HOH A 38 871 871 HOH HOH . 
UA 7 HOH A 39 1713 1713 HOH HOH . 
UA 7 HOH A 40 1714 1714 HOH HOH . 
UA 7 HOH A 41 1715 1715 HOH HOH . 
UA 7 HOH A 42 1716 1716 HOH HOH . 
UA 7 HOH A 43 1717 1717 HOH HOH . 
UA 7 HOH A 44 1720 1720 HOH HOH . 
UA 7 HOH A 45 1721 1721 HOH HOH . 
UA 7 HOH A 46 1722 1722 HOH HOH . 
UA 7 HOH A 47 1723 1723 HOH HOH . 
UA 7 HOH A 48 1724 1724 HOH HOH . 
UA 7 HOH A 49 1741 1741 HOH HOH . 
UA 7 HOH A 50 1742 1742 HOH HOH . 
UA 7 HOH A 51 1745 1745 HOH HOH . 
UA 7 HOH A 52 1801 1801 HOH HOH . 
UA 7 HOH A 53 1808 1808 HOH HOH . 
UA 7 HOH A 54 1811 1811 HOH HOH . 
UA 7 HOH A 55 1814 1814 HOH HOH . 
UA 7 HOH A 56 1816 1816 HOH HOH . 
UA 7 HOH A 57 1817 1817 HOH HOH . 
UA 7 HOH A 58 1818 1818 HOH HOH . 
UA 7 HOH A 59 1822 1822 HOH HOH . 
UA 7 HOH A 60 1823 1823 HOH HOH . 
UA 7 HOH A 61 1824 1824 HOH HOH . 
UA 7 HOH A 62 1826 1826 HOH HOH . 
UA 7 HOH A 63 1827 1827 HOH HOH . 
UA 7 HOH A 64 1829 1829 HOH HOH . 
UA 7 HOH A 65 1830 1830 HOH HOH . 
UA 7 HOH A 66 1831 1831 HOH HOH . 
UA 7 HOH A 67 1832 1832 HOH HOH . 
UA 7 HOH A 68 1853 1853 HOH HOH . 
UA 7 HOH A 69 1854 1854 HOH HOH . 
UA 7 HOH A 70 1857 1857 HOH HOH . 
UA 7 HOH A 71 1861 1861 HOH HOH . 
UA 7 HOH A 72 1862 1862 HOH HOH . 
UA 7 HOH A 73 1863 1863 HOH HOH . 
UA 7 HOH A 74 1864 1864 HOH HOH . 
UA 7 HOH A 75 1866 1866 HOH HOH . 
UA 7 HOH A 76 1868 1868 HOH HOH . 
UA 7 HOH A 77 1869 1869 HOH HOH . 
UA 7 HOH A 78 1870 1870 HOH HOH . 
UA 7 HOH A 79 1872 1872 HOH HOH . 
VA 7 HOH B 1 710 710 HOH HOH . 
VA 7 HOH B 2 711 711 HOH HOH . 
VA 7 HOH B 3 712 712 HOH HOH . 
VA 7 HOH B 4 713 713 HOH HOH . 
VA 7 HOH B 5 715 715 HOH HOH . 
VA 7 HOH B 6 716 716 HOH HOH . 
VA 7 HOH B 7 723 723 HOH HOH . 
VA 7 HOH B 8 724 724 HOH HOH . 
VA 7 HOH B 9 740 740 HOH HOH . 
VA 7 HOH B 10 741 741 HOH HOH . 
VA 7 HOH B 11 745 745 HOH HOH . 
VA 7 HOH B 12 800 800 HOH HOH . 
VA 7 HOH B 13 803 803 HOH HOH . 
VA 7 HOH B 14 806 806 HOH HOH . 
VA 7 HOH B 15 807 807 HOH HOH . 
VA 7 HOH B 16 811 811 HOH HOH . 
VA 7 HOH B 17 812 812 HOH HOH . 
VA 7 HOH B 18 814 814 HOH HOH . 
VA 7 HOH B 19 816 816 HOH HOH . 
VA 7 HOH B 20 817 817 HOH HOH . 
VA 7 HOH B 21 818 818 HOH HOH . 
VA 7 HOH B 22 819 819 HOH HOH . 
VA 7 HOH B 23 820 820 HOH HOH . 
VA 7 HOH B 24 821 821 HOH HOH . 
VA 7 HOH B 25 822 822 HOH HOH . 
VA 7 HOH B 26 824 824 HOH HOH . 
VA 7 HOH B 27 827 827 HOH HOH . 
VA 7 HOH B 28 828 828 HOH HOH . 
VA 7 HOH B 29 832 832 HOH HOH . 
VA 7 HOH B 30 850 850 HOH HOH . 
VA 7 HOH B 31 858 858 HOH HOH . 
VA 7 HOH B 32 860 860 HOH HOH . 
VA 7 HOH B 33 863 863 HOH HOH . 
VA 7 HOH B 34 864 864 HOH HOH . 
VA 7 HOH B 35 865 865 HOH HOH . 
VA 7 HOH B 36 866 866 HOH HOH . 
VA 7 HOH B 37 867 867 HOH HOH . 
VA 7 HOH B 38 868 868 HOH HOH . 
VA 7 HOH B 39 872 872 HOH HOH . 
VA 7 HOH B 40 1710 1710 HOH HOH . 
VA 7 HOH B 41 1711 1711 HOH HOH . 
VA 7 HOH B 42 1712 1712 HOH HOH . 
VA 7 HOH B 43 1740 1740 HOH HOH . 
VA 7 HOH B 44 1743 1743 HOH HOH . 
VA 7 HOH B 45 1744 1744 HOH HOH . 
VA 7 HOH B 46 1800 1800 HOH HOH . 
VA 7 HOH B 47 1802 1802 HOH HOH . 
VA 7 HOH B 48 1803 1803 HOH HOH . 
VA 7 HOH B 49 1804 1804 HOH HOH . 
VA 7 HOH B 50 1805 1805 HOH HOH . 
VA 7 HOH B 51 1806 1806 HOH HOH . 
VA 7 HOH B 52 1807 1807 HOH HOH . 
VA 7 HOH B 53 1809 1809 HOH HOH . 
VA 7 HOH B 54 1810 1810 HOH HOH . 
VA 7 HOH B 55 1812 1812 HOH HOH . 
VA 7 HOH B 56 1813 1813 HOH HOH . 
VA 7 HOH B 57 1815 1815 HOH HOH . 
VA 7 HOH B 58 1819 1819 HOH HOH . 
VA 7 HOH B 59 1820 1820 HOH HOH . 
VA 7 HOH B 60 1821 1821 HOH HOH . 
VA 7 HOH B 61 1825 1825 HOH HOH . 
VA 7 HOH B 62 1828 1828 HOH HOH . 
VA 7 HOH B 63 1833 1833 HOH HOH . 
VA 7 HOH B 64 1834 1834 HOH HOH . 
VA 7 HOH B 65 1850 1850 HOH HOH . 
VA 7 HOH B 66 1851 1851 HOH HOH . 
VA 7 HOH B 67 1852 1852 HOH HOH . 
VA 7 HOH B 68 1855 1855 HOH HOH . 
VA 7 HOH B 69 1856 1856 HOH HOH . 
VA 7 HOH B 70 1858 1858 HOH HOH . 
VA 7 HOH B 71 1859 1859 HOH HOH . 
VA 7 HOH B 72 1860 1860 HOH HOH . 
VA 7 HOH B 73 1865 1865 HOH HOH . 
VA 7 HOH B 74 1867 1867 HOH HOH . 
VA 7 HOH B 75 1871 1871 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 OCT . B . JA 4 -27.968 16.864 11.163 0.65 29.39 ? C1 OCT 621 B 1 
HETATM 2 C C2 OCT . B . JA 4 -27.442 17.013 9.785 0.65 27.46 ? C2 OCT 621 B 1 
HETATM 3 C C3 OCT . B . JA 4 -26.853 18.409 9.501 0.65 28.97 ? C3 OCT 621 B 1 
HETATM 4 C C4 OCT . B . JA 4 -27.041 18.846 8.052 0.65 28.54 ? C4 OCT 621 B 1 
HETATM 5 C C5 OCT . B . JA 4 -26.326 18.075 6.918 0.65 27.11 ? C5 OCT 621 B 1 
HETATM 6 C C6 OCT . B . JA 4 -26.673 18.611 5.563 0.65 27.38 ? C6 OCT 621 B 1 
HETATM 7 C C7 OCT . B . JA 4 -25.65 18.632 4.502 0.65 26.49 ? C7 OCT 621 B 1 
HETATM 8 C C8 OCT . B . JA 4 -25.888 19.794 3.553 0.65 28.41 ? C8 OCT 621 B 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           277 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           8 
#