data_1CWU # _model_server_result.job_id ZKFjBGSQMdeBynHgTsc1Fg _model_server_result.datetime_utc '2025-03-04 21:21:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1cwu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":503}' # _entry.id 1CWU # _exptl.entry_id 1CWU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 663.425 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NICOTINAMIDE-ADENINE-DINUCLEOTIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1CWU _cell.length_a 104.58 _cell.length_b 104.58 _cell.length_c 283.98 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CWU _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 104.58 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C O2D NAD . A NAD 501 1_555 D B1 TDB . A TDB 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.691 ? covale ? covale2 E O2D NAD . B NAD 503 1_555 F B1 TDB . B TDB 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? # _chem_comp.formula 'C21 H27 N7 O14 P2' _chem_comp.formula_weight 663.425 _chem_comp.id NAD _chem_comp.mon_nstd_flag . _chem_comp.name NICOTINAMIDE-ADENINE-DINUCLEOTIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAD doub 237 n n PA O2A NAD sing 238 n n PA O5B NAD sing 239 n n PA O3 NAD sing 240 n n O2A HOA2 NAD sing 241 n n O5B C5B NAD sing 242 n n C5B C4B NAD sing 243 n n C5B H51A NAD sing 244 n n C5B H52A NAD sing 245 n n C4B O4B NAD sing 246 n n C4B C3B NAD sing 247 n n C4B H4B NAD sing 248 n n O4B C1B NAD sing 249 n n C3B O3B NAD sing 250 n n C3B C2B NAD sing 251 n n C3B H3B NAD sing 252 n n O3B HO3A NAD sing 253 n n C2B O2B NAD sing 254 n n C2B C1B NAD sing 255 n n C2B H2B NAD sing 256 n n O2B HO2A NAD sing 257 n n C1B N9A NAD sing 258 n n C1B H1B NAD sing 259 n n N9A C8A NAD sing 260 n y N9A C4A NAD sing 261 n y C8A N7A NAD doub 262 n y C8A H8A NAD sing 263 n n N7A C5A NAD sing 264 n y C5A C6A NAD sing 265 n y C5A C4A NAD doub 266 n y C6A N6A NAD sing 267 n n C6A N1A NAD doub 268 n y N6A H61A NAD sing 269 n n N6A H62A NAD sing 270 n n N1A C2A NAD sing 271 n y C2A N3A NAD doub 272 n y C2A H2A NAD sing 273 n n N3A C4A NAD sing 274 n y O3 PN NAD sing 275 n n PN O1N NAD doub 276 n n PN O2N NAD sing 277 n n PN O5D NAD sing 278 n n O5D C5D NAD sing 279 n n C5D C4D NAD sing 280 n n C5D H51N NAD sing 281 n n C5D H52N NAD sing 282 n n C4D O4D NAD sing 283 n n C4D C3D NAD sing 284 n n C4D H4D NAD sing 285 n n O4D C1D NAD sing 286 n n C3D O3D NAD sing 287 n n C3D C2D NAD sing 288 n n C3D H3D NAD sing 289 n n O3D HO3N NAD sing 290 n n C2D O2D NAD sing 291 n n C2D C1D NAD sing 292 n n C2D H2D NAD sing 293 n n O2D HO2N NAD sing 294 n n C1D N1N NAD sing 295 n n C1D H1D NAD sing 296 n n N1N C2N NAD sing 297 n y N1N C6N NAD doub 298 n y C2N C3N NAD doub 299 n y C2N H2N NAD sing 300 n n C3N C7N NAD sing 301 n n C3N C4N NAD sing 302 n y C7N O7N NAD doub 303 n n C7N N7N NAD sing 304 n n N7N H71N NAD sing 305 n n N7N H72N NAD sing 306 n n C4N C5N NAD doub 307 n y C4N H4N NAD sing 308 n n C5N C6N NAD sing 309 n y C5N H5N NAD sing 310 n n C6N H6N NAD sing 311 n n # _atom_sites.entry_id 1CWU _atom_sites.fract_transf_matrix[1][1] 0.009562 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009562 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003521 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAD A 1 501 501 NAD NAD . D 3 TDB A 1 502 502 TDB TDZ . E 2 NAD B 1 503 501 NAD NAD . F 3 TDB B 1 504 502 TDB TDZ . G 4 HOH A 1 503 1 HOH WAT . G 4 HOH A 2 504 2 HOH WAT . G 4 HOH A 3 505 3 HOH WAT . G 4 HOH A 4 506 4 HOH WAT . G 4 HOH A 5 507 6 HOH WAT . G 4 HOH A 6 508 7 HOH WAT . G 4 HOH A 7 509 8 HOH WAT . G 4 HOH A 8 510 9 HOH WAT . G 4 HOH A 9 511 10 HOH WAT . G 4 HOH A 10 512 11 HOH WAT . G 4 HOH A 11 513 12 HOH WAT . G 4 HOH A 12 514 13 HOH WAT . G 4 HOH A 13 515 14 HOH WAT . G 4 HOH A 14 516 15 HOH WAT . G 4 HOH A 15 517 16 HOH WAT . G 4 HOH A 16 518 17 HOH WAT . G 4 HOH A 17 519 18 HOH WAT . G 4 HOH A 18 520 19 HOH WAT . G 4 HOH A 19 521 20 HOH WAT . G 4 HOH A 20 522 21 HOH WAT . G 4 HOH A 21 523 22 HOH WAT . G 4 HOH A 22 524 26 HOH WAT . G 4 HOH A 23 525 27 HOH WAT . G 4 HOH A 24 526 29 HOH WAT . G 4 HOH A 25 527 30 HOH WAT . G 4 HOH A 26 528 36 HOH WAT . G 4 HOH A 27 529 37 HOH WAT . G 4 HOH A 28 530 38 HOH WAT . G 4 HOH A 29 531 48 HOH WAT . G 4 HOH A 30 532 49 HOH WAT . G 4 HOH A 31 533 50 HOH WAT . G 4 HOH A 32 534 59 HOH WAT . G 4 HOH A 33 535 60 HOH WAT . G 4 HOH A 34 536 61 HOH WAT . G 4 HOH A 35 537 62 HOH WAT . G 4 HOH A 36 538 63 HOH WAT . G 4 HOH A 37 539 64 HOH WAT . G 4 HOH A 38 540 65 HOH WAT . G 4 HOH A 39 541 66 HOH WAT . G 4 HOH A 40 542 67 HOH WAT . G 4 HOH A 41 543 68 HOH WAT . G 4 HOH A 42 544 69 HOH WAT . G 4 HOH A 43 545 70 HOH WAT . G 4 HOH A 44 546 71 HOH WAT . G 4 HOH A 45 547 72 HOH WAT . G 4 HOH A 46 548 73 HOH WAT . G 4 HOH A 47 549 74 HOH WAT . G 4 HOH A 48 550 75 HOH WAT . G 4 HOH A 49 551 76 HOH WAT . G 4 HOH A 50 552 85 HOH WAT . G 4 HOH A 51 553 86 HOH WAT . G 4 HOH A 52 554 87 HOH WAT . G 4 HOH A 53 555 88 HOH WAT . G 4 HOH A 54 556 89 HOH WAT . G 4 HOH A 55 557 90 HOH WAT . G 4 HOH A 56 558 94 HOH WAT . G 4 HOH A 57 559 95 HOH WAT . G 4 HOH A 58 560 103 HOH WAT . G 4 HOH A 59 561 104 HOH WAT . G 4 HOH A 60 562 105 HOH WAT . G 4 HOH A 61 563 106 HOH WAT . G 4 HOH A 62 564 107 HOH WAT . G 4 HOH A 63 565 108 HOH WAT . G 4 HOH A 64 566 109 HOH WAT . H 4 HOH B 1 505 5 HOH WAT . H 4 HOH B 2 506 23 HOH WAT . H 4 HOH B 3 507 24 HOH WAT . H 4 HOH B 4 508 25 HOH WAT . H 4 HOH B 5 509 28 HOH WAT . H 4 HOH B 6 510 31 HOH WAT . H 4 HOH B 7 511 32 HOH WAT . H 4 HOH B 8 512 33 HOH WAT . H 4 HOH B 9 513 34 HOH WAT . H 4 HOH B 10 514 35 HOH WAT . H 4 HOH B 11 515 39 HOH WAT . H 4 HOH B 12 516 40 HOH WAT . H 4 HOH B 13 517 41 HOH WAT . H 4 HOH B 14 518 42 HOH WAT . H 4 HOH B 15 519 43 HOH WAT . H 4 HOH B 16 520 44 HOH WAT . H 4 HOH B 17 521 45 HOH WAT . H 4 HOH B 18 522 46 HOH WAT . H 4 HOH B 19 523 47 HOH WAT . H 4 HOH B 20 524 51 HOH WAT . H 4 HOH B 21 525 52 HOH WAT . H 4 HOH B 22 526 53 HOH WAT . H 4 HOH B 23 527 54 HOH WAT . H 4 HOH B 24 528 55 HOH WAT . H 4 HOH B 25 529 56 HOH WAT . H 4 HOH B 26 530 57 HOH WAT . H 4 HOH B 27 531 58 HOH WAT . H 4 HOH B 28 532 77 HOH WAT . H 4 HOH B 29 533 78 HOH WAT . H 4 HOH B 30 534 79 HOH WAT . H 4 HOH B 31 535 80 HOH WAT . H 4 HOH B 32 536 81 HOH WAT . H 4 HOH B 33 537 82 HOH WAT . H 4 HOH B 34 538 83 HOH WAT . H 4 HOH B 35 539 84 HOH WAT . H 4 HOH B 36 540 91 HOH WAT . H 4 HOH B 37 541 92 HOH WAT . H 4 HOH B 38 542 93 HOH WAT . H 4 HOH B 39 543 96 HOH WAT . H 4 HOH B 40 544 97 HOH WAT . H 4 HOH B 41 545 98 HOH WAT . H 4 HOH B 42 546 99 HOH WAT . H 4 HOH B 43 547 100 HOH WAT . H 4 HOH B 44 548 101 HOH WAT . H 4 HOH B 45 549 102 HOH WAT . H 4 HOH B 46 550 110 HOH WAT . H 4 HOH B 47 551 111 HOH WAT . H 4 HOH B 48 552 112 HOH WAT . H 4 HOH B 49 553 113 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAD . . . E 2 25.223 47.822 1.704 1 24.33 ? PA NAD 503 B 1 HETATM 2 O O1A NAD . . . E 2 25.579 46.687 0.752 1 75.54 ? O1A NAD 503 B 1 HETATM 3 O O2A NAD . . . E 2 26.079 49.077 1.712 1 89.36 ? O2A NAD 503 B 1 HETATM 4 O O5B NAD . . . E 2 25.11 47.325 3.23 1 43.76 ? O5B NAD 503 B 1 HETATM 5 C C5B NAD . . . E 2 24.966 45.877 3.665 1 19.75 ? C5B NAD 503 B 1 HETATM 6 C C4B NAD . . . E 2 26.087 45.506 4.565 1 51.57 ? C4B NAD 503 B 1 HETATM 7 O O4B NAD . . . E 2 25.759 44.291 5.34 1 34.81 ? O4B NAD 503 B 1 HETATM 8 C C3B NAD . . . E 2 27.504 45.122 3.925 1 41.15 ? C3B NAD 503 B 1 HETATM 9 O O3B NAD . . . E 2 28.519 46.153 4.301 1 48.53 ? O3B NAD 503 B 1 HETATM 10 C C2B NAD . . . E 2 27.893 43.759 4.431 1 46.28 ? C2B NAD 503 B 1 HETATM 11 O O2B NAD . . . E 2 29.205 43.558 4.659 1 64.89 ? O2B NAD 503 B 1 HETATM 12 C C1B NAD . . . E 2 26.981 43.758 5.697 1 64.15 ? C1B NAD 503 B 1 HETATM 13 N N9A NAD . . . E 2 26.784 42.424 6.199 1 26.5 ? N9A NAD 503 B 1 HETATM 14 C C8A NAD . . . E 2 26.25 41.28 5.595 1 27.04 ? C8A NAD 503 B 1 HETATM 15 N N7A NAD . . . E 2 26.313 40.169 6.331 1 62.6 ? N7A NAD 503 B 1 HETATM 16 C C5A NAD . . . E 2 26.915 40.527 7.491 1 16.8 ? C5A NAD 503 B 1 HETATM 17 C C6A NAD . . . E 2 27.271 39.729 8.652 1 44.85 ? C6A NAD 503 B 1 HETATM 18 N N6A NAD . . . E 2 27.052 38.458 8.806 1 41.19 ? N6A NAD 503 B 1 HETATM 19 N N1A NAD . . . E 2 27.906 40.471 9.607 1 38.63 ? N1A NAD 503 B 1 HETATM 20 C C2A NAD . . . E 2 28.238 41.748 9.538 1 25.15 ? C2A NAD 503 B 1 HETATM 21 N N3A NAD . . . E 2 27.942 42.549 8.448 1 21.29 ? N3A NAD 503 B 1 HETATM 22 C C4A NAD . . . E 2 27.247 41.912 7.44 1 19.73 ? C4A NAD 503 B 1 HETATM 23 O O3 NAD . . . E 2 23.719 48.23 1.429 1 38.49 ? O3 NAD 503 B 1 HETATM 24 P PN NAD . . . E 2 22.581 49.148 2.251 1 33.34 ? PN NAD 503 B 1 HETATM 25 O O1N NAD . . . E 2 21.557 49.497 1.268 1 49.39 ? O1N NAD 503 B 1 HETATM 26 O O2N NAD . . . E 2 23.278 50.172 3.038 1 40.99 ? O2N NAD 503 B 1 HETATM 27 O O5D NAD . . . E 2 21.953 48.143 3.36 1 35.68 ? O5D NAD 503 B 1 HETATM 28 C C5D NAD . . . E 2 22.431 48.032 4.733 1 24.79 ? C5D NAD 503 B 1 HETATM 29 C C4D NAD . . . E 2 21.324 48.199 5.69 1 74.84 ? C4D NAD 503 B 1 HETATM 30 O O4D NAD . . . E 2 20.355 49.14 4.983 1 30.86 ? O4D NAD 503 B 1 HETATM 31 C C3D NAD . . . E 2 20.33 46.993 5.996 1 17.02 ? C3D NAD 503 B 1 HETATM 32 O O3D NAD . . . E 2 19.824 47.307 7.216 1 34.93 ? O3D NAD 503 B 1 HETATM 33 C C2D NAD . . . E 2 19.268 47.085 4.857 1 18.57 ? C2D NAD 503 B 1 HETATM 34 O O2D NAD . . . E 2 18.125 46.333 5.078 1 30.12 ? O2D NAD 503 B 1 HETATM 35 C C1D NAD . . . E 2 19.076 48.614 4.953 1 29.6 ? C1D NAD 503 B 1 HETATM 36 N N1N NAD . . . E 2 18.18 49.321 3.869 1 31.14 ? N1N NAD 503 B 1 HETATM 37 C C2N NAD . . . E 2 18.613 49.601 2.56 1 17.97 ? C2N NAD 503 B 1 HETATM 38 C C3N NAD . . . E 2 17.585 50.162 1.777 1 3.7 ? C3N NAD 503 B 1 HETATM 39 C C7N NAD . . . E 2 18.055 50.476 0.303 1 24.6 ? C7N NAD 503 B 1 HETATM 40 O O7N NAD . . . E 2 17.201 50.942 -0.432 1 25.01 ? O7N NAD 503 B 1 HETATM 41 N N7N NAD . . . E 2 19.339 50.211 -0.069 1 32.78 ? N7N NAD 503 B 1 HETATM 42 C C4N NAD . . . E 2 16.247 50.438 2.151 1 42.89 ? C4N NAD 503 B 1 HETATM 43 C C5N NAD . . . E 2 15.965 50.108 3.504 1 11.26 ? C5N NAD 503 B 1 HETATM 44 C C6N NAD . . . E 2 16.939 49.623 4.351 1 7.47 ? C6N NAD 503 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 460 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 44 #