data_1CX9 # _model_server_result.job_id 53LdCgyDyWxvzL5XGLpWRQ _model_server_result.datetime_utc '2024-12-18 13:08:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1cx9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":270}' # _entry.id 1CX9 # _exptl.entry_id 1CX9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details 'INHIBITOR OF THE ALPHA-REACTION OF TRYPTOPHAN SYNTHASE' _entity.formula_weight 261.278 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-AMINOPHENYLTHIO)-BUTYLPHOSPHONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.5 _cell.angle_gamma 90 _cell.entry_id 1CX9 _cell.length_a 182.65 _cell.length_b 59.34 _cell.length_c 67.3 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CX9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,y,-z -1 0 0 0 1 0 0 0 -1 182.65 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B NZ LYS 87 B LYS 87 1_555 E C4A PLP . B PLP 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? metalc ? metalc1 B O GLY 232 B GLY 232 1_555 D NA NA . B NA 1162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc2 B O PHE 306 B PHE 306 1_555 D NA NA . B NA 1162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.624 ? metalc ? metalc3 B O SER 308 B SER 308 1_555 D NA NA . B NA 1162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? metalc ? metalc4 G O HOH . B HOH 1112 1_555 D NA NA . B NA 1162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? # _chem_comp.formula 'C10 H16 N O3 P S' _chem_comp.formula_weight 261.278 _chem_comp.id NHP _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-AMINOPHENYLTHIO)-BUTYLPHOSPHONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 NHP doub 237 n y C1 C6 NHP sing 238 n y C1 H1 NHP sing 239 n n C2 C3 NHP sing 240 n y C2 S1 NHP sing 241 n n C3 C4 NHP doub 242 n y C3 N1 NHP sing 243 n n C4 C5 NHP sing 244 n y C4 H4 NHP sing 245 n n C5 C6 NHP doub 246 n y C5 H5 NHP sing 247 n n C6 H6 NHP sing 248 n n N1 HN11 NHP sing 249 n n N1 HN12 NHP sing 250 n n S1 C7 NHP sing 251 n n C7 C8 NHP sing 252 n n C7 H71 NHP sing 253 n n C7 H72 NHP sing 254 n n C8 C9 NHP sing 255 n n C8 H81 NHP sing 256 n n C8 H82 NHP sing 257 n n C9 C10 NHP sing 258 n n C9 H91 NHP sing 259 n n C9 H92 NHP sing 260 n n C10 P1 NHP sing 261 n n C10 H101 NHP sing 262 n n C10 H102 NHP sing 263 n n P1 O1 NHP sing 264 n n P1 O2 NHP sing 265 n n P1 O3 NHP doub 266 n n O1 HO1 NHP sing 267 n n O2 HO2 NHP sing 268 n n # _atom_sites.entry_id 1CX9 _atom_sites.fract_transf_matrix[1][1] 0.005475 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000431 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016852 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014905 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NHP A 1 270 270 NHP NHP . D 4 NA B 1 1162 1162 NA NA . E 5 PLP B 1 900 900 PLP PLP . F 6 HOH A 1 1002 1002 HOH HOH . F 6 HOH A 2 1003 1003 HOH HOH . F 6 HOH A 3 1005 1005 HOH HOH . F 6 HOH A 4 1010 1010 HOH HOH . F 6 HOH A 5 1017 1017 HOH HOH . F 6 HOH A 6 1019 1019 HOH HOH . F 6 HOH A 7 1024 1024 HOH HOH . F 6 HOH A 8 1030 1030 HOH HOH . F 6 HOH A 9 1031 1031 HOH HOH . F 6 HOH A 10 1034 1034 HOH HOH . F 6 HOH A 11 1037 1037 HOH HOH . F 6 HOH A 12 1040 1040 HOH HOH . F 6 HOH A 13 1044 1044 HOH HOH . F 6 HOH A 14 1047 1047 HOH HOH . F 6 HOH A 15 1049 1049 HOH HOH . F 6 HOH A 16 1051 1051 HOH HOH . F 6 HOH A 17 1052 1052 HOH HOH . F 6 HOH A 18 1055 1055 HOH HOH . F 6 HOH A 19 1056 1056 HOH HOH . F 6 HOH A 20 1057 1057 HOH HOH . F 6 HOH A 21 1063 1063 HOH HOH . F 6 HOH A 22 1066 1066 HOH HOH . F 6 HOH A 23 1067 1067 HOH HOH . F 6 HOH A 24 1073 1073 HOH HOH . F 6 HOH A 25 1074 1074 HOH HOH . F 6 HOH A 26 1075 1075 HOH HOH . F 6 HOH A 27 1082 1082 HOH HOH . F 6 HOH A 28 1083 1083 HOH HOH . F 6 HOH A 29 1088 1088 HOH HOH . F 6 HOH A 30 1089 1089 HOH HOH . F 6 HOH A 31 1091 1091 HOH HOH . F 6 HOH A 32 1096 1096 HOH HOH . F 6 HOH A 33 1104 1104 HOH HOH . F 6 HOH A 34 1105 1105 HOH HOH . F 6 HOH A 35 1107 1107 HOH HOH . F 6 HOH A 36 1108 1108 HOH HOH . F 6 HOH A 37 1109 1109 HOH HOH . F 6 HOH A 38 1111 1111 HOH HOH . F 6 HOH A 39 1113 1113 HOH HOH . F 6 HOH A 40 1114 1114 HOH HOH . F 6 HOH A 41 1119 1119 HOH HOH . F 6 HOH A 42 1126 1126 HOH HOH . F 6 HOH A 43 1130 1130 HOH HOH . F 6 HOH A 44 1131 1131 HOH HOH . F 6 HOH A 45 1132 1132 HOH HOH . F 6 HOH A 46 1135 1135 HOH HOH . F 6 HOH A 47 1141 1141 HOH HOH . F 6 HOH A 48 1144 1144 HOH HOH . F 6 HOH A 49 1146 1146 HOH HOH . F 6 HOH A 50 1150 1150 HOH HOH . F 6 HOH A 51 1159 1159 HOH HOH . F 6 HOH A 52 1161 1161 HOH HOH . G 6 HOH B 1 1001 1001 HOH HOH . G 6 HOH B 2 1004 1004 HOH HOH . G 6 HOH B 3 1006 1006 HOH HOH . G 6 HOH B 4 1007 1007 HOH HOH . G 6 HOH B 5 1008 1008 HOH HOH . G 6 HOH B 6 1009 1009 HOH HOH . G 6 HOH B 7 1011 1011 HOH HOH . G 6 HOH B 8 1012 1012 HOH HOH . G 6 HOH B 9 1013 1013 HOH HOH . G 6 HOH B 10 1014 1014 HOH HOH . G 6 HOH B 11 1015 1015 HOH HOH . G 6 HOH B 12 1016 1016 HOH HOH . G 6 HOH B 13 1018 1018 HOH HOH . G 6 HOH B 14 1020 1020 HOH HOH . G 6 HOH B 15 1021 1021 HOH HOH . G 6 HOH B 16 1022 1022 HOH HOH . G 6 HOH B 17 1023 1023 HOH HOH . G 6 HOH B 18 1025 1025 HOH HOH . G 6 HOH B 19 1026 1026 HOH HOH . G 6 HOH B 20 1027 1027 HOH HOH . G 6 HOH B 21 1028 1028 HOH HOH . G 6 HOH B 22 1029 1029 HOH HOH . G 6 HOH B 23 1032 1032 HOH HOH . G 6 HOH B 24 1033 1033 HOH HOH . G 6 HOH B 25 1035 1035 HOH HOH . G 6 HOH B 26 1036 1036 HOH HOH . G 6 HOH B 27 1038 1038 HOH HOH . G 6 HOH B 28 1039 1039 HOH HOH . G 6 HOH B 29 1041 1041 HOH HOH . G 6 HOH B 30 1042 1042 HOH HOH . G 6 HOH B 31 1043 1043 HOH HOH . G 6 HOH B 32 1045 1045 HOH HOH . G 6 HOH B 33 1046 1046 HOH HOH . G 6 HOH B 34 1048 1048 HOH HOH . G 6 HOH B 35 1050 1050 HOH HOH . G 6 HOH B 36 1053 1053 HOH HOH . G 6 HOH B 37 1054 1054 HOH HOH . G 6 HOH B 38 1058 1058 HOH HOH . G 6 HOH B 39 1059 1059 HOH HOH . G 6 HOH B 40 1060 1060 HOH HOH . G 6 HOH B 41 1061 1061 HOH HOH . G 6 HOH B 42 1062 1062 HOH HOH . G 6 HOH B 43 1064 1064 HOH HOH . G 6 HOH B 44 1065 1065 HOH HOH . G 6 HOH B 45 1068 1068 HOH HOH . G 6 HOH B 46 1069 1069 HOH HOH . G 6 HOH B 47 1070 1070 HOH HOH . G 6 HOH B 48 1071 1071 HOH HOH . G 6 HOH B 49 1072 1072 HOH HOH . G 6 HOH B 50 1076 1076 HOH HOH . G 6 HOH B 51 1077 1077 HOH HOH . G 6 HOH B 52 1079 1079 HOH HOH . G 6 HOH B 53 1080 1080 HOH HOH . G 6 HOH B 54 1081 1081 HOH HOH . G 6 HOH B 55 1084 1084 HOH HOH . G 6 HOH B 56 1085 1085 HOH HOH . G 6 HOH B 57 1087 1087 HOH HOH . G 6 HOH B 58 1090 1090 HOH HOH . G 6 HOH B 59 1092 1092 HOH HOH . G 6 HOH B 60 1093 1093 HOH HOH . G 6 HOH B 61 1094 1094 HOH HOH . G 6 HOH B 62 1095 1095 HOH HOH . G 6 HOH B 63 1097 1097 HOH HOH . G 6 HOH B 64 1098 1098 HOH HOH . G 6 HOH B 65 1099 1099 HOH HOH . G 6 HOH B 66 1100 1100 HOH HOH . G 6 HOH B 67 1101 1101 HOH HOH . G 6 HOH B 68 1102 1102 HOH HOH . G 6 HOH B 69 1103 1103 HOH HOH . G 6 HOH B 70 1106 1106 HOH HOH . G 6 HOH B 71 1110 1110 HOH HOH . G 6 HOH B 72 1112 1112 HOH HOH . G 6 HOH B 73 1115 1115 HOH HOH . G 6 HOH B 74 1116 1116 HOH HOH . G 6 HOH B 75 1117 1117 HOH HOH . G 6 HOH B 76 1118 1118 HOH HOH . G 6 HOH B 77 1120 1120 HOH HOH . G 6 HOH B 78 1121 1121 HOH HOH . G 6 HOH B 79 1122 1122 HOH HOH . G 6 HOH B 80 1123 1123 HOH HOH . G 6 HOH B 81 1124 1124 HOH HOH . G 6 HOH B 82 1125 1125 HOH HOH . G 6 HOH B 83 1127 1127 HOH HOH . G 6 HOH B 84 1128 1128 HOH HOH . G 6 HOH B 85 1129 1129 HOH HOH . G 6 HOH B 86 1133 1133 HOH HOH . G 6 HOH B 87 1134 1134 HOH HOH . G 6 HOH B 88 1136 1136 HOH HOH . G 6 HOH B 89 1137 1137 HOH HOH . G 6 HOH B 90 1138 1138 HOH HOH . G 6 HOH B 91 1139 1139 HOH HOH . G 6 HOH B 92 1142 1142 HOH HOH . G 6 HOH B 93 1143 1143 HOH HOH . G 6 HOH B 94 1145 1145 HOH HOH . G 6 HOH B 95 1147 1147 HOH HOH . G 6 HOH B 96 1148 1148 HOH HOH . G 6 HOH B 97 1149 1149 HOH HOH . G 6 HOH B 98 1152 1152 HOH HOH . G 6 HOH B 99 1153 1153 HOH HOH . G 6 HOH B 100 1154 1154 HOH HOH . G 6 HOH B 101 1155 1155 HOH HOH . G 6 HOH B 102 1156 1156 HOH HOH . G 6 HOH B 103 1157 1157 HOH HOH . G 6 HOH B 104 1158 1158 HOH HOH . G 6 HOH B 105 1160 1160 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NHP . . . C 3 49.294 24.298 15.481 1 19.19 ? C1 NHP 270 A 1 HETATM 2 C C2 NHP . . . C 3 49.681 25.643 15.541 1 22.03 ? C2 NHP 270 A 1 HETATM 3 C C3 NHP . . . C 3 51 26.031 15.167 1 21.79 ? C3 NHP 270 A 1 HETATM 4 C C4 NHP . . . C 3 51.909 25.042 14.749 1 20.96 ? C4 NHP 270 A 1 HETATM 5 C C5 NHP . . . C 3 51.519 23.698 14.695 1 20.78 ? C5 NHP 270 A 1 HETATM 6 C C6 NHP . . . C 3 50.216 23.331 15.061 1 20.1 ? C6 NHP 270 A 1 HETATM 7 N N1 NHP . . . C 3 51.428 27.393 15.209 1 19.34 ? N1 NHP 270 A 1 HETATM 8 S S1 NHP . . . C 3 48.539 26.889 16.077 1 23.2 ? S1 NHP 270 A 1 HETATM 9 C C7 NHP . . . C 3 47.69 27.683 14.704 1 24.77 ? C7 NHP 270 A 1 HETATM 10 C C8 NHP . . . C 3 48.674 28.043 13.589 1 26.5 ? C8 NHP 270 A 1 HETATM 11 C C9 NHP . . . C 3 47.93 28.708 12.438 1 28.58 ? C9 NHP 270 A 1 HETATM 12 C C10 NHP . . . C 3 48.877 29.384 11.443 1 34.48 ? C10 NHP 270 A 1 HETATM 13 P P1 NHP . . . C 3 48.252 29.471 9.828 1 38.19 ? P1 NHP 270 A 1 HETATM 14 O O1 NHP . . . C 3 49.068 30.319 8.918 1 41.55 ? O1 NHP 270 A 1 HETATM 15 O O2 NHP . . . C 3 46.843 30.048 9.712 1 35.78 ? O2 NHP 270 A 1 HETATM 16 O O3 NHP . . . C 3 48.177 28.141 9.089 1 38.52 ? O3 NHP 270 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 229 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 16 #