data_1CXA # _model_server_result.job_id gsm98Iy4b54FbK7RXE7XUA _model_server_result.datetime_utc '2024-10-19 08:36:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1cxa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":126}' # _entry.id 1CXA # _exptl.entry_id 1CXA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 618.503 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEME C' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1CXA _cell.length_a 64.3 _cell.length_b 64.3 _cell.length_c 163.4 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CXA _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 15 A CYS 15 1_555 C CAB HEC . A HEC 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.811 ? covale ? covale2 A SG CYS 18 A CYS 18 1_555 C CAC HEC . A HEC 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.808 ? metalc ? metalc1 A NE2 HIS 19 A HIS 19 1_555 C FE HEC . A HEC 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc2 B N3 IMD . A IMD 125 1_555 C FE HEC . A HEC 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? # _chem_comp.formula 'C34 H34 Fe N4 O4' _chem_comp.formula_weight 618.503 _chem_comp.id HEC _chem_comp.mon_nstd_flag . _chem_comp.name 'HEME C' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1CXA _atom_sites.fract_transf_matrix[1][1] 0.015552 _atom_sites.fract_transf_matrix[1][2] 0.008979 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017958 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00612 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IMD A 1 125 125 IMD IMD . C 3 HEC A 1 126 126 HEC HEM . D 4 HOH A 1 127 127 HOH HOH . D 4 HOH A 2 128 128 HOH HOH . D 4 HOH A 3 129 129 HOH HOH . D 4 HOH A 4 130 130 HOH HOH . D 4 HOH A 5 131 131 HOH HOH . D 4 HOH A 6 132 132 HOH HOH . D 4 HOH A 7 133 133 HOH HOH . D 4 HOH A 8 134 134 HOH HOH . D 4 HOH A 9 135 135 HOH HOH . D 4 HOH A 10 136 136 HOH HOH . D 4 HOH A 11 137 137 HOH HOH . D 4 HOH A 12 138 138 HOH HOH . D 4 HOH A 13 139 139 HOH HOH . D 4 HOH A 14 140 140 HOH HOH . D 4 HOH A 15 141 141 HOH HOH . D 4 HOH A 16 142 142 HOH HOH . D 4 HOH A 17 143 143 HOH HOH . D 4 HOH A 18 144 144 HOH HOH . D 4 HOH A 19 145 145 HOH HOH . D 4 HOH A 20 146 146 HOH HOH . D 4 HOH A 21 147 147 HOH HOH . D 4 HOH A 22 148 148 HOH HOH . D 4 HOH A 23 149 149 HOH HOH . D 4 HOH A 24 150 150 HOH HOH . D 4 HOH A 25 151 151 HOH HOH . D 4 HOH A 26 152 152 HOH HOH . D 4 HOH A 27 153 153 HOH HOH . D 4 HOH A 28 154 154 HOH HOH . D 4 HOH A 29 155 155 HOH HOH . D 4 HOH A 30 156 156 HOH HOH . D 4 HOH A 31 157 157 HOH HOH . D 4 HOH A 32 158 158 HOH HOH . D 4 HOH A 33 159 159 HOH HOH . D 4 HOH A 34 160 160 HOH HOH . D 4 HOH A 35 161 161 HOH HOH . D 4 HOH A 36 162 162 HOH HOH . D 4 HOH A 37 163 163 HOH HOH . D 4 HOH A 38 164 164 HOH HOH . D 4 HOH A 39 165 165 HOH HOH . D 4 HOH A 40 166 166 HOH HOH . D 4 HOH A 41 167 167 HOH HOH . D 4 HOH A 42 168 168 HOH HOH . D 4 HOH A 43 169 169 HOH HOH . D 4 HOH A 44 170 170 HOH HOH . D 4 HOH A 45 171 171 HOH HOH . D 4 HOH A 46 172 172 HOH HOH . D 4 HOH A 47 173 173 HOH HOH . D 4 HOH A 48 174 174 HOH HOH . D 4 HOH A 49 175 175 HOH HOH . D 4 HOH A 50 176 176 HOH HOH . D 4 HOH A 51 177 177 HOH HOH . D 4 HOH A 52 178 178 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE HEC . . . C 3 0.935 27.251 67.719 1 21.71 ? FE HEC 126 A 1 HETATM 2 C CHA HEC . . . C 3 -0.278 24.997 69.998 1 17.42 ? CHA HEC 126 A 1 HETATM 3 C CHB HEC . . . C 3 -1.309 26.174 65.472 1 21.16 ? CHB HEC 126 A 1 HETATM 4 C CHC HEC . . . C 3 2.063 29.602 65.546 1 17.79 ? CHC HEC 126 A 1 HETATM 5 C CHD HEC . . . C 3 3.287 28.22 69.981 1 19.24 ? CHD HEC 126 A 1 HETATM 6 N NA HEC . . . C 3 -0.433 25.848 67.715 1 19.42 ? NA HEC 126 A 1 HETATM 7 C C1A HEC . . . C 3 -0.832 25.005 68.749 1 17.49 ? C1A HEC 126 A 1 HETATM 8 C C2A HEC . . . C 3 -1.917 24.14 68.34 1 22.15 ? C2A HEC 126 A 1 HETATM 9 C C3A HEC . . . C 3 -2.237 24.496 67.069 1 20.66 ? C3A HEC 126 A 1 HETATM 10 C C4A HEC . . . C 3 -1.301 25.53 66.693 1 19.35 ? C4A HEC 126 A 1 HETATM 11 C CMA HEC . . . C 3 -3.466 24.025 66.308 1 17.21 ? CMA HEC 126 A 1 HETATM 12 C CAA HEC . . . C 3 -2.506 22.96 69.116 1 18.56 ? CAA HEC 126 A 1 HETATM 13 C CBA HEC . . . C 3 -1.937 21.681 68.57 1 19.27 ? CBA HEC 126 A 1 HETATM 14 C CGA HEC . . . C 3 -2.055 20.557 69.542 1 19.64 ? CGA HEC 126 A 1 HETATM 15 O O1A HEC . . . C 3 -1.199 19.698 69.505 1 20.11 ? O1A HEC 126 A 1 HETATM 16 O O2A HEC . . . C 3 -3.152 20.356 70.03 1 22.02 ? O2A HEC 126 A 1 HETATM 17 N NB HEC . . . C 3 0.542 27.74 65.875 1 17.67 ? NB HEC 126 A 1 HETATM 18 C C1B HEC . . . C 3 -0.452 27.201 65.088 1 22.27 ? C1B HEC 126 A 1 HETATM 19 C C2B HEC . . . C 3 -0.527 27.837 63.796 1 22.1 ? C2B HEC 126 A 1 HETATM 20 C C3B HEC . . . C 3 0.445 28.818 63.78 1 19.28 ? C3B HEC 126 A 1 HETATM 21 C C4B HEC . . . C 3 1.08 28.74 65.089 1 19.91 ? C4B HEC 126 A 1 HETATM 22 C CMB HEC . . . C 3 -1.484 27.385 62.687 1 15.5 ? CMB HEC 126 A 1 HETATM 23 C CAB HEC . . . C 3 0.709 29.729 62.727 1 15.98 ? CAB HEC 126 A 1 HETATM 24 C CBB HEC . . . C 3 -0.325 30.619 62.204 1 13.88 ? CBB HEC 126 A 1 HETATM 25 N NC HEC . . . C 3 2.33 28.633 67.788 1 21.26 ? NC HEC 126 A 1 HETATM 26 C C1C HEC . . . C 3 2.646 29.565 66.802 1 18.04 ? C1C HEC 126 A 1 HETATM 27 C C2C HEC . . . C 3 3.751 30.408 67.223 1 18.19 ? C2C HEC 126 A 1 HETATM 28 C C3C HEC . . . C 3 4.144 29.982 68.439 1 20.29 ? C3C HEC 126 A 1 HETATM 29 C C4C HEC . . . C 3 3.25 28.897 68.79 1 19.78 ? C4C HEC 126 A 1 HETATM 30 C CMC HEC . . . C 3 4.426 31.521 66.417 1 19.36 ? CMC HEC 126 A 1 HETATM 31 C CAC HEC . . . C 3 5.282 30.423 69.129 1 21.73 ? CAC HEC 126 A 1 HETATM 32 C CBC HEC . . . C 3 5.423 31.804 69.54 1 22.21 ? CBC HEC 126 A 1 HETATM 33 N ND HEC . . . C 3 1.387 26.727 69.553 1 17.2 ? ND HEC 126 A 1 HETATM 34 C C1D HEC . . . C 3 2.417 27.224 70.348 1 22.52 ? C1D HEC 126 A 1 HETATM 35 C C2D HEC . . . C 3 2.414 26.603 71.653 1 21.31 ? C2D HEC 126 A 1 HETATM 36 C C3D HEC . . . C 3 1.387 25.754 71.696 1 16.32 ? C3D HEC 126 A 1 HETATM 37 C C4D HEC . . . C 3 0.769 25.799 70.387 1 17.15 ? C4D HEC 126 A 1 HETATM 38 C CMD HEC . . . C 3 3.416 26.836 72.755 1 18.98 ? CMD HEC 126 A 1 HETATM 39 C CAD HEC . . . C 3 0.843 25.123 72.948 1 17.08 ? CAD HEC 126 A 1 HETATM 40 C CBD HEC . . . C 3 -0.402 25.835 73.441 1 21.41 ? CBD HEC 126 A 1 HETATM 41 C CGD HEC . . . C 3 -0.662 25.523 74.903 1 26.46 ? CGD HEC 126 A 1 HETATM 42 O O1D HEC . . . C 3 -1.422 26.239 75.548 1 22.9 ? O1D HEC 126 A 1 HETATM 43 O O2D HEC . . . C 3 -0.289 24.435 75.306 1 27.09 ? O2D HEC 126 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 43 #