data_1CY5 # _model_server_result.job_id hDP6GoQEuIQJku0v3Q2xLw _model_server_result.datetime_utc '2024-11-09 02:14:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1cy5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":104}' # _entry.id 1CY5 # _exptl.entry_id 1CY5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1CY5 _cell.length_a 36.35 _cell.length_b 46.91 _cell.length_c 54.35 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CY5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B ZN ZN . A ZN 101 1_555 A OE1 GLU 17 A GLU 17 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.554 ? metalc ? metalc2 E ZN ZN . A ZN 104 1_555 A OE2 GLU 41 A GLU 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.576 ? covale ? covale1 G S2 BME . A BME 99 1_555 A SG CYS 8 A CYS 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? metalc ? metalc3 B ZN ZN . A ZN 101 1_555 H O HOH . A HOH 290 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.934 ? metalc ? metalc4 B ZN ZN . A ZN 101 1_555 A OE1 GLU 17 A GLU 17 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc5 B ZN ZN . A ZN 101 1_555 H O HOH . A HOH 201 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.984 ? metalc ? metalc6 B ZN ZN . A ZN 101 1_555 A OE2 GLU 17 A GLU 17 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.711 ? metalc ? metalc7 C ZN ZN . A ZN 102 1_555 A OE2 GLU 40 A GLU 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.921 ? metalc ? metalc8 C ZN ZN . A ZN 102 1_555 H O HOH . A HOH 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.904 ? metalc ? metalc9 C ZN ZN . A ZN 102 1_555 A OD1 ASP 27 A ASP 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? metalc ? metalc10 C ZN ZN . A ZN 102 1_555 A OE1 GLU 40 A GLU 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.601 ? metalc ? metalc11 D ZN ZN . A ZN 103 1_555 A NE2 HIS 28 A HIS 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc12 D ZN ZN . A ZN 103 1_555 H O HOH . A HOH 299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.751 ? metalc ? metalc13 D ZN ZN . A ZN 103 1_555 A OD1 ASP 32 A ASP 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? metalc ? metalc14 E ZN ZN . A ZN 104 1_555 A OE1 GLU 41 A GLU 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.639 ? metalc ? metalc15 F ZN ZN . A ZN 105 1_555 A OE2 GLU 78 A GLU 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.939 ? metalc ? metalc16 F ZN ZN . A ZN 105 1_555 A ND1 HIS 28 A HIS 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.828 ? metalc ? metalc17 F ZN ZN . A ZN 105 1_555 H O HOH . A HOH 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.64 ? metalc ? metalc18 B ZN ZN . A ZN 101 1_555 A OD1 ASP 66 A ASP 66 3_555 ? A ? ? ? ? ? ? ? ? ? ? 2.501 ? metalc ? metalc19 B ZN ZN . A ZN 101 1_555 A OD2 ASP 64 A ASP 64 3_555 ? A ? ? ? ? ? ? ? ? ? ? 1.843 ? metalc ? metalc20 B ZN ZN . A ZN 101 1_555 A OD2 ASP 66 A ASP 66 3_555 ? A ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc21 B ZN ZN . A ZN 101 1_555 A OD2 ASP 64 A ASP 64 3_555 ? B ? ? ? ? ? ? ? ? ? ? 2.265 ? metalc ? metalc22 B ZN ZN . A ZN 101 1_555 A OD2 ASP 66 A ASP 66 3_555 ? B ? ? ? ? ? ? ? ? ? ? 2.061 ? metalc ? metalc23 C ZN ZN . A ZN 102 1_555 A NE2 HIS 88 A HIS 88 2_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc24 E ZN ZN . A ZN 104 1_555 A NE2 HIS 77 A HIS 77 2_554 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1CY5 _atom_sites.fract_transf_matrix[1][1] 0.02751 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021317 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018399 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 101 101 ZN ZN . C 2 ZN A 1 102 102 ZN ZN . D 2 ZN A 1 103 103 ZN ZN . E 2 ZN A 1 104 104 ZN ZN . F 2 ZN A 1 105 105 ZN ZN . G 3 BME A 1 99 99 BME BME . H 4 HOH A 1 201 201 HOH HOH . H 4 HOH A 2 202 202 HOH HOH . H 4 HOH A 3 203 203 HOH HOH . H 4 HOH A 4 204 204 HOH HOH . H 4 HOH A 5 205 205 HOH HOH . H 4 HOH A 6 206 206 HOH HOH . H 4 HOH A 7 207 207 HOH HOH . H 4 HOH A 8 208 208 HOH HOH . H 4 HOH A 9 209 209 HOH HOH . H 4 HOH A 10 210 210 HOH HOH . H 4 HOH A 11 211 211 HOH HOH . H 4 HOH A 12 212 212 HOH HOH . H 4 HOH A 13 213 213 HOH HOH . H 4 HOH A 14 214 214 HOH HOH . H 4 HOH A 15 215 215 HOH HOH . H 4 HOH A 16 216 216 HOH HOH . H 4 HOH A 17 217 217 HOH HOH . H 4 HOH A 18 218 218 HOH HOH . H 4 HOH A 19 219 219 HOH HOH . H 4 HOH A 20 220 220 HOH HOH . H 4 HOH A 21 221 221 HOH HOH . H 4 HOH A 22 222 222 HOH HOH . H 4 HOH A 23 223 223 HOH HOH . H 4 HOH A 24 224 224 HOH HOH . H 4 HOH A 25 225 225 HOH HOH . H 4 HOH A 26 226 226 HOH HOH . H 4 HOH A 27 227 227 HOH HOH . H 4 HOH A 28 228 228 HOH HOH . H 4 HOH A 29 229 229 HOH HOH . H 4 HOH A 30 230 230 HOH HOH . H 4 HOH A 31 231 231 HOH HOH . H 4 HOH A 32 232 232 HOH HOH . H 4 HOH A 33 233 233 HOH HOH . H 4 HOH A 34 234 234 HOH HOH . H 4 HOH A 35 235 235 HOH HOH . H 4 HOH A 36 236 236 HOH HOH . H 4 HOH A 37 237 237 HOH HOH . H 4 HOH A 38 238 238 HOH HOH . H 4 HOH A 39 239 239 HOH HOH . H 4 HOH A 40 240 240 HOH HOH . H 4 HOH A 41 241 241 HOH HOH . H 4 HOH A 42 242 242 HOH HOH . H 4 HOH A 43 243 243 HOH HOH . H 4 HOH A 44 244 244 HOH HOH . H 4 HOH A 45 245 245 HOH HOH . H 4 HOH A 46 246 246 HOH HOH . H 4 HOH A 47 247 247 HOH HOH . H 4 HOH A 48 248 248 HOH HOH . H 4 HOH A 49 249 249 HOH HOH . H 4 HOH A 50 250 250 HOH HOH . H 4 HOH A 51 251 251 HOH HOH . H 4 HOH A 52 252 252 HOH HOH . H 4 HOH A 53 253 253 HOH HOH . H 4 HOH A 54 254 254 HOH HOH . H 4 HOH A 55 255 255 HOH HOH . H 4 HOH A 56 256 256 HOH HOH . H 4 HOH A 57 257 257 HOH HOH . H 4 HOH A 58 258 258 HOH HOH . H 4 HOH A 59 259 259 HOH HOH . H 4 HOH A 60 260 260 HOH HOH . H 4 HOH A 61 261 261 HOH HOH . H 4 HOH A 62 262 262 HOH HOH . H 4 HOH A 63 263 263 HOH HOH . H 4 HOH A 64 264 264 HOH HOH . H 4 HOH A 65 265 265 HOH HOH . H 4 HOH A 66 266 266 HOH HOH . H 4 HOH A 67 267 267 HOH HOH . H 4 HOH A 68 268 268 HOH HOH . H 4 HOH A 69 269 269 HOH HOH . H 4 HOH A 70 270 270 HOH HOH . H 4 HOH A 71 271 271 HOH HOH . H 4 HOH A 72 272 272 HOH HOH . H 4 HOH A 73 273 273 HOH HOH . H 4 HOH A 74 274 274 HOH HOH . H 4 HOH A 75 275 275 HOH HOH . H 4 HOH A 76 276 276 HOH HOH . H 4 HOH A 77 277 277 HOH HOH . H 4 HOH A 78 278 278 HOH HOH . H 4 HOH A 79 279 279 HOH HOH . H 4 HOH A 80 280 280 HOH HOH . H 4 HOH A 81 281 281 HOH HOH . H 4 HOH A 82 282 282 HOH HOH . H 4 HOH A 83 283 283 HOH HOH . H 4 HOH A 84 284 284 HOH HOH . H 4 HOH A 85 285 285 HOH HOH . H 4 HOH A 86 286 286 HOH HOH . H 4 HOH A 87 287 287 HOH HOH . H 4 HOH A 88 288 288 HOH HOH . H 4 HOH A 89 289 289 HOH HOH . H 4 HOH A 90 290 290 HOH HOH . H 4 HOH A 91 291 291 HOH HOH . H 4 HOH A 92 292 292 HOH HOH . H 4 HOH A 93 293 293 HOH HOH . H 4 HOH A 94 294 294 HOH HOH . H 4 HOH A 95 295 295 HOH HOH . H 4 HOH A 96 296 296 HOH HOH . H 4 HOH A 97 297 297 HOH HOH . H 4 HOH A 98 298 298 HOH HOH . H 4 HOH A 99 299 299 HOH HOH . H 4 HOH A 100 300 300 HOH HOH . H 4 HOH A 101 301 301 HOH HOH . H 4 HOH A 102 302 302 HOH HOH . H 4 HOH A 103 303 303 HOH HOH . H 4 HOH A 104 304 304 HOH HOH . H 4 HOH A 105 305 305 HOH HOH . H 4 HOH A 106 306 306 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x 5.332 _atom_site.Cartn_y 4.556 _atom_site.Cartn_z -4.818 _atom_site.occupancy 0.29 _atom_site.B_iso_or_equiv 28.71 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 104 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 18 _model_server_stats.element_count 1 #