data_1CYX # _model_server_result.job_id t5cUp1zj_W0B630U9xNUXg _model_server_result.datetime_utc '2024-10-24 04:33:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1cyx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":316}' # _entry.id 1CYX # _exptl.entry_id 1CYX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 127.092 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DINUCLEAR COPPER ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1CYX _cell.length_a 46 _cell.length_b 98.2 _cell.length_c 39.9 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CYX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 62 A HIS 172 1_555 B CU2 CUA . A CUA 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.833 ? metalc ? metalc2 A SG CYS 97 A CYS 207 1_555 B CU1 CUA . A CUA 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc3 A SG CYS 97 A CYS 207 1_555 B CU2 CUA . A CUA 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? metalc ? metalc4 A O GLU 99 A GLU 209 1_555 B CU1 CUA . A CUA 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc5 A SG CYS 101 A CYS 211 1_555 B CU1 CUA . A CUA 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? metalc ? metalc6 A SG CYS 101 A CYS 211 1_555 B CU2 CUA . A CUA 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc7 A ND1 HIS 105 A HIS 215 1_555 B CU1 CUA . A CUA 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.734 ? # _chem_comp.formula Cu2 _chem_comp.formula_weight 127.092 _chem_comp.id CUA _chem_comp.mon_nstd_flag . _chem_comp.name 'DINUCLEAR COPPER ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _chem_comp_bond.atom_id_1 CU1 _chem_comp_bond.atom_id_2 CU2 _chem_comp_bond.comp_id CUA _chem_comp_bond.value_order sing _chem_comp_bond.pdbx_ordinal 70 _chem_comp_bond.pdbx_stereo_config n _chem_comp_bond.pdbx_aromatic_flag n # _atom_sites.entry_id 1CYX _atom_sites.fract_transf_matrix[1][1] 0.021739 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010183 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025063 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CUA A 1 316 201 CUA CUA . C 3 HOH A 1 317 1 HOH HOH . C 3 HOH A 2 318 2 HOH HOH . C 3 HOH A 3 319 3 HOH HOH . C 3 HOH A 4 320 4 HOH HOH . C 3 HOH A 5 321 5 HOH HOH . C 3 HOH A 6 322 6 HOH HOH . C 3 HOH A 7 323 7 HOH HOH . C 3 HOH A 8 324 8 HOH HOH . C 3 HOH A 9 325 9 HOH HOH . C 3 HOH A 10 326 10 HOH HOH . C 3 HOH A 11 327 11 HOH HOH . C 3 HOH A 12 328 12 HOH HOH . C 3 HOH A 13 329 13 HOH HOH . C 3 HOH A 14 330 14 HOH HOH . C 3 HOH A 15 331 15 HOH HOH . C 3 HOH A 16 332 16 HOH HOH . C 3 HOH A 17 333 17 HOH HOH . C 3 HOH A 18 334 18 HOH HOH . C 3 HOH A 19 335 19 HOH HOH . C 3 HOH A 20 336 20 HOH HOH . C 3 HOH A 21 337 21 HOH HOH . C 3 HOH A 22 338 22 HOH HOH . C 3 HOH A 23 339 23 HOH HOH . C 3 HOH A 24 340 24 HOH HOH . C 3 HOH A 25 341 25 HOH HOH . C 3 HOH A 26 342 26 HOH HOH . C 3 HOH A 27 343 27 HOH HOH . C 3 HOH A 28 344 28 HOH HOH . C 3 HOH A 29 345 29 HOH HOH . C 3 HOH A 30 346 30 HOH HOH . C 3 HOH A 31 347 31 HOH HOH . C 3 HOH A 32 348 32 HOH HOH . C 3 HOH A 33 349 33 HOH HOH . C 3 HOH A 34 350 34 HOH HOH . C 3 HOH A 35 351 35 HOH HOH . C 3 HOH A 36 352 36 HOH HOH . C 3 HOH A 37 353 37 HOH HOH . C 3 HOH A 38 354 38 HOH HOH . C 3 HOH A 39 355 39 HOH HOH . C 3 HOH A 40 356 40 HOH HOH . C 3 HOH A 41 357 41 HOH HOH . C 3 HOH A 42 358 42 HOH HOH . C 3 HOH A 43 359 43 HOH HOH . C 3 HOH A 44 360 44 HOH HOH . C 3 HOH A 45 361 45 HOH HOH . C 3 HOH A 46 362 46 HOH HOH . C 3 HOH A 47 363 47 HOH HOH . C 3 HOH A 48 364 48 HOH HOH . C 3 HOH A 49 365 49 HOH HOH . C 3 HOH A 50 366 50 HOH HOH . C 3 HOH A 51 367 51 HOH HOH . C 3 HOH A 52 368 52 HOH HOH . C 3 HOH A 53 369 53 HOH HOH . C 3 HOH A 54 370 54 HOH HOH . C 3 HOH A 55 371 55 HOH HOH . C 3 HOH A 56 372 56 HOH HOH . C 3 HOH A 57 373 57 HOH HOH . C 3 HOH A 58 374 58 HOH HOH . C 3 HOH A 59 375 59 HOH HOH . C 3 HOH A 60 376 60 HOH HOH . C 3 HOH A 61 377 61 HOH HOH . C 3 HOH A 62 378 62 HOH HOH . C 3 HOH A 63 379 63 HOH HOH . C 3 HOH A 64 380 64 HOH HOH . C 3 HOH A 65 381 65 HOH HOH . C 3 HOH A 66 382 66 HOH HOH . C 3 HOH A 67 383 67 HOH HOH . C 3 HOH A 68 384 68 HOH HOH . C 3 HOH A 69 385 69 HOH HOH . C 3 HOH A 70 386 70 HOH HOH . C 3 HOH A 71 387 71 HOH HOH . C 3 HOH A 72 388 72 HOH HOH . C 3 HOH A 73 389 73 HOH HOH . C 3 HOH A 74 390 74 HOH HOH . C 3 HOH A 75 391 75 HOH HOH . C 3 HOH A 76 392 76 HOH HOH . C 3 HOH A 77 393 77 HOH HOH . C 3 HOH A 78 394 78 HOH HOH . C 3 HOH A 79 395 79 HOH HOH . C 3 HOH A 80 396 80 HOH HOH . C 3 HOH A 81 397 81 HOH HOH . C 3 HOH A 82 398 82 HOH HOH . C 3 HOH A 83 399 83 HOH HOH . C 3 HOH A 84 400 84 HOH HOH . C 3 HOH A 85 401 85 HOH HOH . C 3 HOH A 86 402 86 HOH HOH . C 3 HOH A 87 403 87 HOH HOH . C 3 HOH A 88 404 88 HOH HOH . C 3 HOH A 89 405 89 HOH HOH . C 3 HOH A 90 406 90 HOH HOH . C 3 HOH A 91 407 91 HOH HOH . C 3 HOH A 92 408 92 HOH HOH . C 3 HOH A 93 409 93 HOH HOH . C 3 HOH A 94 410 94 HOH HOH . C 3 HOH A 95 411 95 HOH HOH . C 3 HOH A 96 412 96 HOH HOH . C 3 HOH A 97 413 97 HOH HOH . C 3 HOH A 98 414 98 HOH HOH . C 3 HOH A 99 415 99 HOH HOH . C 3 HOH A 100 416 100 HOH HOH . C 3 HOH A 101 417 101 HOH HOH . C 3 HOH A 102 418 102 HOH HOH . C 3 HOH A 103 419 103 HOH HOH . C 3 HOH A 104 420 104 HOH HOH . C 3 HOH A 105 421 105 HOH HOH . C 3 HOH A 106 422 106 HOH HOH . C 3 HOH A 107 423 107 HOH HOH . C 3 HOH A 108 424 108 HOH HOH . C 3 HOH A 109 425 109 HOH HOH . C 3 HOH A 110 426 110 HOH HOH . C 3 HOH A 111 427 111 HOH HOH . C 3 HOH A 112 428 112 HOH HOH . C 3 HOH A 113 429 113 HOH HOH . C 3 HOH A 114 430 114 HOH HOH . C 3 HOH A 115 431 115 HOH HOH . C 3 HOH A 116 432 116 HOH HOH . C 3 HOH A 117 433 117 HOH HOH . C 3 HOH A 118 434 118 HOH HOH . C 3 HOH A 119 435 119 HOH HOH . C 3 HOH A 120 436 120 HOH HOH . C 3 HOH A 121 437 121 HOH HOH . C 3 HOH A 122 438 122 HOH HOH . C 3 HOH A 123 439 123 HOH HOH . C 3 HOH A 124 440 124 HOH HOH . C 3 HOH A 125 441 125 HOH HOH . C 3 HOH A 126 442 126 HOH HOH . C 3 HOH A 127 443 127 HOH HOH . C 3 HOH A 128 444 128 HOH HOH . C 3 HOH A 129 445 129 HOH HOH . C 3 HOH A 130 446 130 HOH HOH . C 3 HOH A 131 447 131 HOH HOH . C 3 HOH A 132 448 132 HOH HOH . C 3 HOH A 133 449 133 HOH HOH . C 3 HOH A 134 450 134 HOH HOH . C 3 HOH A 135 451 135 HOH HOH . C 3 HOH A 136 452 136 HOH HOH . C 3 HOH A 137 453 137 HOH HOH . C 3 HOH A 138 454 138 HOH HOH . C 3 HOH A 139 455 139 HOH HOH . C 3 HOH A 140 456 140 HOH HOH . C 3 HOH A 141 457 141 HOH HOH . C 3 HOH A 142 458 142 HOH HOH . C 3 HOH A 143 459 143 HOH HOH . C 3 HOH A 144 460 144 HOH HOH . C 3 HOH A 145 461 145 HOH HOH . C 3 HOH A 146 462 146 HOH HOH . C 3 HOH A 147 463 147 HOH HOH . C 3 HOH A 148 464 148 HOH HOH . C 3 HOH A 149 465 149 HOH HOH . C 3 HOH A 150 466 150 HOH HOH . C 3 HOH A 151 467 151 HOH HOH . C 3 HOH A 152 468 152 HOH HOH . C 3 HOH A 153 469 153 HOH HOH . C 3 HOH A 154 470 154 HOH HOH . C 3 HOH A 155 471 155 HOH HOH . C 3 HOH A 156 472 156 HOH HOH . C 3 HOH A 157 473 157 HOH HOH . C 3 HOH A 158 474 158 HOH HOH . C 3 HOH A 159 475 159 HOH HOH . C 3 HOH A 160 476 160 HOH HOH . C 3 HOH A 161 477 161 HOH HOH . C 3 HOH A 162 478 162 HOH HOH . C 3 HOH A 163 479 163 HOH HOH . C 3 HOH A 164 480 164 HOH HOH . C 3 HOH A 165 481 165 HOH HOH . C 3 HOH A 166 482 166 HOH HOH . C 3 HOH A 167 483 167 HOH HOH . C 3 HOH A 168 484 168 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 CU CU1 CUA . . . B 2 -5.561 19.451 11.833 1 15.61 ? CU1 CUA 316 A 1 HETATM 2 CU CU2 CUA . . . B 2 -5.912 21.903 11.943 1 17.49 ? CU2 CUA 316 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 229 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 2 #