data_1CZK # _model_server_result.job_id LmnoJQs7M2Mf4PgPusDriQ _model_server_result.datetime_utc '2025-03-05 04:06:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1czk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":170}' # _entry.id 1CZK # _exptl.entry_id 1CZK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1CZK _cell.length_a 60.17 _cell.length_b 66.17 _cell.length_c 51.41 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CZK _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 83 n n N1 C10 FMN doub 84 n n C2 O2 FMN doub 85 n n C2 N3 FMN sing 86 n n N3 C4 FMN sing 87 n n N3 HN3 FMN sing 88 n n C4 O4 FMN doub 89 n n C4 C4A FMN sing 90 n n C4A N5 FMN doub 91 n n C4A C10 FMN sing 92 n n N5 C5A FMN sing 93 n n C5A C6 FMN doub 94 n y C5A C9A FMN sing 95 n y C6 C7 FMN sing 96 n y C6 H6 FMN sing 97 n n C7 C7M FMN sing 98 n n C7 C8 FMN doub 99 n y C7M HM71 FMN sing 100 n n C7M HM72 FMN sing 101 n n C7M HM73 FMN sing 102 n n C8 C8M FMN sing 103 n n C8 C9 FMN sing 104 n y C8M HM81 FMN sing 105 n n C8M HM82 FMN sing 106 n n C8M HM83 FMN sing 107 n n C9 C9A FMN doub 108 n y C9 H9 FMN sing 109 n n C9A N10 FMN sing 110 n n N10 C10 FMN sing 111 n n N10 C1' FMN sing 112 n n C1' C2' FMN sing 113 n n C1' "H1'1" FMN sing 114 n n C1' "H1'2" FMN sing 115 n n C2' O2' FMN sing 116 n n C2' C3' FMN sing 117 n n C2' H2' FMN sing 118 n n O2' HO2' FMN sing 119 n n C3' O3' FMN sing 120 n n C3' C4' FMN sing 121 n n C3' H3' FMN sing 122 n n O3' HO3' FMN sing 123 n n C4' O4' FMN sing 124 n n C4' C5' FMN sing 125 n n C4' H4' FMN sing 126 n n O4' HO4' FMN sing 127 n n C5' O5' FMN sing 128 n n C5' "H5'1" FMN sing 129 n n C5' "H5'2" FMN sing 130 n n O5' P FMN sing 131 n n P O1P FMN doub 132 n n P O2P FMN sing 133 n n P O3P FMN sing 134 n n O2P HOP2 FMN sing 135 n n O3P HOP3 FMN sing 136 n n # _atom_sites.entry_id 1CZK _atom_sites.fract_transf_matrix[1][1] 0.01662 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015113 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019451 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN A 1 170 170 FMN FMN . C 3 HOH A 1 172 172 HOH WAT . C 3 HOH A 2 174 174 HOH WAT . C 3 HOH A 3 175 175 HOH WAT . C 3 HOH A 4 177 177 HOH WAT . C 3 HOH A 5 178 178 HOH WAT . C 3 HOH A 6 179 179 HOH WAT . C 3 HOH A 7 180 180 HOH WAT . C 3 HOH A 8 181 181 HOH WAT . C 3 HOH A 9 182 182 HOH WAT . C 3 HOH A 10 183 183 HOH WAT . C 3 HOH A 11 184 184 HOH WAT . C 3 HOH A 12 185 185 HOH WAT . C 3 HOH A 13 186 186 HOH WAT . C 3 HOH A 14 188 188 HOH WAT . C 3 HOH A 15 189 189 HOH WAT . C 3 HOH A 16 191 191 HOH WAT . C 3 HOH A 17 192 192 HOH WAT . C 3 HOH A 18 193 193 HOH WAT . C 3 HOH A 19 196 196 HOH WAT . C 3 HOH A 20 198 198 HOH WAT . C 3 HOH A 21 199 199 HOH WAT . C 3 HOH A 22 200 200 HOH WAT . C 3 HOH A 23 201 201 HOH WAT . C 3 HOH A 24 204 204 HOH WAT . C 3 HOH A 25 205 205 HOH WAT . C 3 HOH A 26 206 206 HOH WAT . C 3 HOH A 27 208 208 HOH WAT . C 3 HOH A 28 213 213 HOH WAT . C 3 HOH A 29 214 214 HOH WAT . C 3 HOH A 30 215 215 HOH WAT . C 3 HOH A 31 216 216 HOH WAT . C 3 HOH A 32 217 217 HOH WAT . C 3 HOH A 33 218 218 HOH WAT . C 3 HOH A 34 219 219 HOH WAT . C 3 HOH A 35 220 220 HOH WAT . C 3 HOH A 36 222 222 HOH WAT . C 3 HOH A 37 223 223 HOH WAT . C 3 HOH A 38 224 224 HOH WAT . C 3 HOH A 39 230 230 HOH WAT . C 3 HOH A 40 233 233 HOH WAT . C 3 HOH A 41 234 234 HOH WAT . C 3 HOH A 42 235 235 HOH WAT . C 3 HOH A 43 236 236 HOH WAT . C 3 HOH A 44 238 238 HOH WAT . C 3 HOH A 45 239 239 HOH WAT . C 3 HOH A 46 240 240 HOH WAT . C 3 HOH A 47 241 241 HOH WAT . C 3 HOH A 48 242 242 HOH WAT . C 3 HOH A 49 244 244 HOH WAT . C 3 HOH A 50 245 245 HOH WAT . C 3 HOH A 51 248 248 HOH WAT . C 3 HOH A 52 253 253 HOH WAT . C 3 HOH A 53 254 254 HOH WAT . C 3 HOH A 54 255 255 HOH WAT . C 3 HOH A 55 257 257 HOH WAT . C 3 HOH A 56 300 300 HOH WAT . C 3 HOH A 57 301 301 HOH WAT . C 3 HOH A 58 304 304 HOH WAT . C 3 HOH A 59 305 305 HOH WAT . C 3 HOH A 60 306 306 HOH WAT . C 3 HOH A 61 307 307 HOH WAT . C 3 HOH A 62 308 308 HOH WAT . C 3 HOH A 63 309 309 HOH WAT . C 3 HOH A 64 310 310 HOH WAT . C 3 HOH A 65 311 311 HOH WAT . C 3 HOH A 66 312 312 HOH WAT . C 3 HOH A 67 313 313 HOH WAT . C 3 HOH A 68 314 314 HOH WAT . C 3 HOH A 69 315 315 HOH WAT . C 3 HOH A 70 316 316 HOH WAT . C 3 HOH A 71 317 317 HOH WAT . C 3 HOH A 72 318 318 HOH WAT . C 3 HOH A 73 320 320 HOH WAT . C 3 HOH A 74 322 322 HOH WAT . C 3 HOH A 75 323 323 HOH WAT . C 3 HOH A 76 324 324 HOH WAT . C 3 HOH A 77 325 325 HOH WAT . C 3 HOH A 78 326 326 HOH WAT . C 3 HOH A 79 327 327 HOH WAT . C 3 HOH A 80 328 328 HOH WAT . C 3 HOH A 81 329 329 HOH WAT . C 3 HOH A 82 330 330 HOH WAT . C 3 HOH A 83 331 331 HOH WAT . C 3 HOH A 84 332 332 HOH WAT . C 3 HOH A 85 501 501 HOH WAT . C 3 HOH A 86 502 502 HOH WAT . C 3 HOH A 87 504 504 HOH WAT . C 3 HOH A 88 505 505 HOH WAT . C 3 HOH A 89 506 506 HOH WAT . C 3 HOH A 90 507 507 HOH WAT . C 3 HOH A 91 508 508 HOH WAT . C 3 HOH A 92 510 510 HOH WAT . C 3 HOH A 93 513 513 HOH WAT . C 3 HOH A 94 514 514 HOH WAT . C 3 HOH A 95 515 515 HOH WAT . C 3 HOH A 96 517 517 HOH WAT . C 3 HOH A 97 518 518 HOH WAT . C 3 HOH A 98 519 519 HOH WAT . C 3 HOH A 99 520 520 HOH WAT . C 3 HOH A 100 521 521 HOH WAT . C 3 HOH A 101 522 522 HOH WAT . C 3 HOH A 102 523 523 HOH WAT . C 3 HOH A 103 524 524 HOH WAT . C 3 HOH A 104 525 525 HOH WAT . C 3 HOH A 105 526 526 HOH WAT . C 3 HOH A 106 527 527 HOH WAT . C 3 HOH A 107 528 528 HOH WAT . C 3 HOH A 108 529 529 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . B 2 1.329 44.548 53.495 1 7.47 ? N1 FMN 170 A 1 HETATM 2 C C2 FMN . . . B 2 0.415 45.355 54.115 1 5.06 ? C2 FMN 170 A 1 HETATM 3 O O2 FMN . . . B 2 -0.693 44.954 54.396 1 7.64 ? O2 FMN 170 A 1 HETATM 4 N N3 FMN . . . B 2 0.737 46.663 54.44 1 6.3 ? N3 FMN 170 A 1 HETATM 5 C C4 FMN . . . B 2 1.934 47.26 54.157 1 5.23 ? C4 FMN 170 A 1 HETATM 6 O O4 FMN . . . B 2 2.143 48.403 54.484 1 7.46 ? O4 FMN 170 A 1 HETATM 7 C C4A FMN . . . B 2 2.927 46.42 53.463 1 3.58 ? C4A FMN 170 A 1 HETATM 8 N N5 FMN . . . B 2 4.147 46.87 53.268 1 2.27 ? N5 FMN 170 A 1 HETATM 9 C C5A FMN . . . B 2 5.055 46.022 52.667 1 4.52 ? C5A FMN 170 A 1 HETATM 10 C C6 FMN . . . B 2 6.361 46.476 52.4 1 4.55 ? C6 FMN 170 A 1 HETATM 11 C C7 FMN . . . B 2 7.358 45.663 51.893 1 5.23 ? C7 FMN 170 A 1 HETATM 12 C C7M FMN . . . B 2 8.756 46.242 51.618 1 6.55 ? C7M FMN 170 A 1 HETATM 13 C C8 FMN . . . B 2 7.056 44.285 51.616 1 4.86 ? C8 FMN 170 A 1 HETATM 14 C C8M FMN . . . B 2 8.125 43.344 51.112 1 4.51 ? C8M FMN 170 A 1 HETATM 15 C C9 FMN . . . B 2 5.772 43.802 51.827 1 4.73 ? C9 FMN 170 A 1 HETATM 16 C C9A FMN . . . B 2 4.757 44.655 52.361 1 5.54 ? C9A FMN 170 A 1 HETATM 17 N N10 FMN . . . B 2 3.455 44.23 52.595 1 6.68 ? N10 FMN 170 A 1 HETATM 18 C C10 FMN . . . B 2 2.502 45.059 53.167 1 6 ? C10 FMN 170 A 1 HETATM 19 C C1' FMN . . . B 2 3.095 42.85 52.197 1 4.82 ? C1' FMN 170 A 1 HETATM 20 C C2' FMN . . . B 2 2.749 42.799 50.706 1 7.44 ? C2' FMN 170 A 1 HETATM 21 O O2' FMN . . . B 2 1.607 43.583 50.341 1 4.51 ? O2' FMN 170 A 1 HETATM 22 C C3' FMN . . . B 2 2.533 41.352 50.279 1 6.65 ? C3' FMN 170 A 1 HETATM 23 O O3' FMN . . . B 2 3.774 40.641 50.355 1 10.2 ? O3' FMN 170 A 1 HETATM 24 C C4' FMN . . . B 2 1.852 41.043 48.945 1 5.2 ? C4' FMN 170 A 1 HETATM 25 O O4' FMN . . . B 2 1.729 39.623 48.802 1 6.05 ? O4' FMN 170 A 1 HETATM 26 C C5' FMN . . . B 2 2.623 41.65 47.777 1 5.06 ? C5' FMN 170 A 1 HETATM 27 O O5' FMN . . . B 2 1.883 41.42 46.569 1 7.9 ? O5' FMN 170 A 1 HETATM 28 P P FMN . . . B 2 2.564 41.696 45.161 1 7.46 ? P FMN 170 A 1 HETATM 29 O O1P FMN . . . B 2 3.318 40.491 44.849 1 7.33 ? O1P FMN 170 A 1 HETATM 30 O O2P FMN . . . B 2 3.142 43.043 44.988 1 7.93 ? O2P FMN 170 A 1 HETATM 31 O O3P FMN . . . B 2 1.287 41.645 44.29 1 8.45 ? O3P FMN 170 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #