data_1CZU # _model_server_result.job_id 2ICj1YZTBGLllwl69_1TCA _model_server_result.datetime_utc '2025-03-05 04:12:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1czu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":170}' # _entry.id 1CZU # _exptl.entry_id 1CZU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1CZU _cell.length_a 60.05 _cell.length_b 65.85 _cell.length_c 51.36 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1CZU _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 83 n n N1 C10 FMN doub 84 n n C2 O2 FMN doub 85 n n C2 N3 FMN sing 86 n n N3 C4 FMN sing 87 n n N3 HN3 FMN sing 88 n n C4 O4 FMN doub 89 n n C4 C4A FMN sing 90 n n C4A N5 FMN doub 91 n n C4A C10 FMN sing 92 n n N5 C5A FMN sing 93 n n C5A C6 FMN doub 94 n y C5A C9A FMN sing 95 n y C6 C7 FMN sing 96 n y C6 H6 FMN sing 97 n n C7 C7M FMN sing 98 n n C7 C8 FMN doub 99 n y C7M HM71 FMN sing 100 n n C7M HM72 FMN sing 101 n n C7M HM73 FMN sing 102 n n C8 C8M FMN sing 103 n n C8 C9 FMN sing 104 n y C8M HM81 FMN sing 105 n n C8M HM82 FMN sing 106 n n C8M HM83 FMN sing 107 n n C9 C9A FMN doub 108 n y C9 H9 FMN sing 109 n n C9A N10 FMN sing 110 n n N10 C10 FMN sing 111 n n N10 C1' FMN sing 112 n n C1' C2' FMN sing 113 n n C1' "H1'1" FMN sing 114 n n C1' "H1'2" FMN sing 115 n n C2' O2' FMN sing 116 n n C2' C3' FMN sing 117 n n C2' H2' FMN sing 118 n n O2' HO2' FMN sing 119 n n C3' O3' FMN sing 120 n n C3' C4' FMN sing 121 n n C3' H3' FMN sing 122 n n O3' HO3' FMN sing 123 n n C4' O4' FMN sing 124 n n C4' C5' FMN sing 125 n n C4' H4' FMN sing 126 n n O4' HO4' FMN sing 127 n n C5' O5' FMN sing 128 n n C5' "H5'1" FMN sing 129 n n C5' "H5'2" FMN sing 130 n n O5' P FMN sing 131 n n P O1P FMN doub 132 n n P O2P FMN sing 133 n n P O3P FMN sing 134 n n O2P HOP2 FMN sing 135 n n O3P HOP3 FMN sing 136 n n # _atom_sites.entry_id 1CZU _atom_sites.fract_transf_matrix[1][1] 0.016653 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015186 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01947 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN A 1 170 170 FMN FMN . C 3 HOH A 1 201 201 HOH WAT . C 3 HOH A 2 202 202 HOH WAT . C 3 HOH A 3 203 203 HOH WAT . C 3 HOH A 4 204 204 HOH WAT . C 3 HOH A 5 205 205 HOH WAT . C 3 HOH A 6 206 206 HOH WAT . C 3 HOH A 7 207 207 HOH WAT . C 3 HOH A 8 208 208 HOH WAT . C 3 HOH A 9 209 209 HOH WAT . C 3 HOH A 10 210 210 HOH WAT . C 3 HOH A 11 211 211 HOH WAT . C 3 HOH A 12 212 212 HOH WAT . C 3 HOH A 13 213 213 HOH WAT . C 3 HOH A 14 214 214 HOH WAT . C 3 HOH A 15 215 215 HOH WAT . C 3 HOH A 16 216 216 HOH WAT . C 3 HOH A 17 217 217 HOH WAT . C 3 HOH A 18 218 218 HOH WAT . C 3 HOH A 19 219 219 HOH WAT . C 3 HOH A 20 220 220 HOH WAT . C 3 HOH A 21 221 221 HOH WAT . C 3 HOH A 22 222 222 HOH WAT . C 3 HOH A 23 223 223 HOH WAT . C 3 HOH A 24 224 224 HOH WAT . C 3 HOH A 25 225 225 HOH WAT . C 3 HOH A 26 226 226 HOH WAT . C 3 HOH A 27 227 227 HOH WAT . C 3 HOH A 28 228 228 HOH WAT . C 3 HOH A 29 229 229 HOH WAT . C 3 HOH A 30 230 230 HOH WAT . C 3 HOH A 31 231 231 HOH WAT . C 3 HOH A 32 232 232 HOH WAT . C 3 HOH A 33 233 233 HOH WAT . C 3 HOH A 34 234 234 HOH WAT . C 3 HOH A 35 235 235 HOH WAT . C 3 HOH A 36 236 236 HOH WAT . C 3 HOH A 37 237 237 HOH WAT . C 3 HOH A 38 238 238 HOH WAT . C 3 HOH A 39 239 239 HOH WAT . C 3 HOH A 40 240 240 HOH WAT . C 3 HOH A 41 241 241 HOH WAT . C 3 HOH A 42 243 243 HOH WAT . C 3 HOH A 43 244 244 HOH WAT . C 3 HOH A 44 245 245 HOH WAT . C 3 HOH A 45 246 246 HOH WAT . C 3 HOH A 46 247 247 HOH WAT . C 3 HOH A 47 248 248 HOH WAT . C 3 HOH A 48 249 249 HOH WAT . C 3 HOH A 49 250 250 HOH WAT . C 3 HOH A 50 251 251 HOH WAT . C 3 HOH A 51 252 252 HOH WAT . C 3 HOH A 52 253 253 HOH WAT . C 3 HOH A 53 254 254 HOH WAT . C 3 HOH A 54 255 255 HOH WAT . C 3 HOH A 55 256 256 HOH WAT . C 3 HOH A 56 258 258 HOH WAT . C 3 HOH A 57 259 259 HOH WAT . C 3 HOH A 58 260 260 HOH WAT . C 3 HOH A 59 261 261 HOH WAT . C 3 HOH A 60 262 262 HOH WAT . C 3 HOH A 61 263 263 HOH WAT . C 3 HOH A 62 264 264 HOH WAT . C 3 HOH A 63 265 265 HOH WAT . C 3 HOH A 64 266 266 HOH WAT . C 3 HOH A 65 267 267 HOH WAT . C 3 HOH A 66 268 268 HOH WAT . C 3 HOH A 67 269 269 HOH WAT . C 3 HOH A 68 270 270 HOH WAT . C 3 HOH A 69 271 271 HOH WAT . C 3 HOH A 70 272 272 HOH WAT . C 3 HOH A 71 273 273 HOH WAT . C 3 HOH A 72 274 274 HOH WAT . C 3 HOH A 73 275 275 HOH WAT . C 3 HOH A 74 276 276 HOH WAT . C 3 HOH A 75 277 277 HOH WAT . C 3 HOH A 76 278 278 HOH WAT . C 3 HOH A 77 280 280 HOH WAT . C 3 HOH A 78 281 281 HOH WAT . C 3 HOH A 79 282 282 HOH WAT . C 3 HOH A 80 301 301 HOH WAT . C 3 HOH A 81 303 303 HOH WAT . C 3 HOH A 82 316 316 HOH WAT . C 3 HOH A 83 319 319 HOH WAT . C 3 HOH A 84 322 322 HOH WAT . C 3 HOH A 85 330 330 HOH WAT . C 3 HOH A 86 337 337 HOH WAT . C 3 HOH A 87 342 342 HOH WAT . C 3 HOH A 88 364 364 HOH WAT . C 3 HOH A 89 369 369 HOH WAT . C 3 HOH A 90 393 393 HOH WAT . C 3 HOH A 91 398 398 HOH WAT . C 3 HOH A 92 399 399 HOH WAT . C 3 HOH A 93 400 400 HOH WAT . C 3 HOH A 94 402 402 HOH WAT . C 3 HOH A 95 404 404 HOH WAT . C 3 HOH A 96 405 405 HOH WAT . C 3 HOH A 97 406 406 HOH WAT . C 3 HOH A 98 407 407 HOH WAT . C 3 HOH A 99 408 408 HOH WAT . C 3 HOH A 100 409 409 HOH WAT . C 3 HOH A 101 410 410 HOH WAT . C 3 HOH A 102 412 412 HOH WAT . C 3 HOH A 103 413 413 HOH WAT . C 3 HOH A 104 414 414 HOH WAT . C 3 HOH A 105 415 415 HOH WAT . C 3 HOH A 106 419 419 HOH WAT . C 3 HOH A 107 420 420 HOH WAT . C 3 HOH A 108 422 422 HOH WAT . C 3 HOH A 109 423 423 HOH WAT . C 3 HOH A 110 424 424 HOH WAT . C 3 HOH A 111 425 425 HOH WAT . C 3 HOH A 112 426 426 HOH WAT . C 3 HOH A 113 427 427 HOH WAT . C 3 HOH A 114 428 428 HOH WAT . C 3 HOH A 115 430 430 HOH WAT . C 3 HOH A 116 431 431 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . B 2 1.475 44.18 53.449 1 10.67 ? N1 FMN 170 A 1 HETATM 2 C C2 FMN . . . B 2 0.532 45.002 54.012 1 8.66 ? C2 FMN 170 A 1 HETATM 3 O O2 FMN . . . B 2 -0.58 44.597 54.259 1 10.05 ? O2 FMN 170 A 1 HETATM 4 N N3 FMN . . . B 2 0.855 46.323 54.324 1 8.99 ? N3 FMN 170 A 1 HETATM 5 C C4 FMN . . . B 2 2.08 46.9 54.08 1 8.81 ? C4 FMN 170 A 1 HETATM 6 O O4 FMN . . . B 2 2.3 48.068 54.352 1 9.14 ? O4 FMN 170 A 1 HETATM 7 C C4A FMN . . . B 2 3.097 46.029 53.459 1 8.63 ? C4A FMN 170 A 1 HETATM 8 N N5 FMN . . . B 2 4.309 46.506 53.208 1 8.74 ? N5 FMN 170 A 1 HETATM 9 C C5A FMN . . . B 2 5.235 45.665 52.619 1 8.47 ? C5A FMN 170 A 1 HETATM 10 C C6 FMN . . . B 2 6.551 46.158 52.38 1 9.8 ? C6 FMN 170 A 1 HETATM 11 C C7 FMN . . . B 2 7.533 45.355 51.825 1 9.81 ? C7 FMN 170 A 1 HETATM 12 C C7M FMN . . . B 2 8.921 45.935 51.565 1 10.13 ? C7M FMN 170 A 1 HETATM 13 C C8 FMN . . . B 2 7.207 43.975 51.528 1 9.9 ? C8 FMN 170 A 1 HETATM 14 C C8M FMN . . . B 2 8.256 42.993 51.103 1 9.79 ? C8M FMN 170 A 1 HETATM 15 C C9 FMN . . . B 2 5.912 43.493 51.669 1 9.73 ? C9 FMN 170 A 1 HETATM 16 C C9A FMN . . . B 2 4.912 44.318 52.257 1 9.74 ? C9A FMN 170 A 1 HETATM 17 N N10 FMN . . . B 2 3.593 43.865 52.531 1 9.98 ? N10 FMN 170 A 1 HETATM 18 C C10 FMN . . . B 2 2.667 44.666 53.17 1 8.92 ? C10 FMN 170 A 1 HETATM 19 C C1' FMN . . . B 2 3.192 42.504 52.151 1 5.55 ? C1' FMN 170 A 1 HETATM 20 C C2' FMN . . . B 2 2.853 42.469 50.658 1 7.08 ? C2' FMN 170 A 1 HETATM 21 O O2' FMN . . . B 2 1.743 43.282 50.25 1 7.97 ? O2' FMN 170 A 1 HETATM 22 C C3' FMN . . . B 2 2.596 41.028 50.246 1 7.67 ? C3' FMN 170 A 1 HETATM 23 O O3' FMN . . . B 2 3.804 40.271 50.368 1 10.69 ? O3' FMN 170 A 1 HETATM 24 C C4' FMN . . . B 2 1.934 40.753 48.888 1 6.5 ? C4' FMN 170 A 1 HETATM 25 O O4' FMN . . . B 2 1.796 39.343 48.712 1 8.39 ? O4' FMN 170 A 1 HETATM 26 C C5' FMN . . . B 2 2.753 41.332 47.738 1 8.04 ? C5' FMN 170 A 1 HETATM 27 O O5' FMN . . . B 2 1.988 41.234 46.525 1 10.55 ? O5' FMN 170 A 1 HETATM 28 P P FMN . . . B 2 2.59 41.411 45.08 1 9.11 ? P FMN 170 A 1 HETATM 29 O O1P FMN . . . B 2 3.363 40.219 44.821 1 8.21 ? O1P FMN 170 A 1 HETATM 30 O O2P FMN . . . B 2 3.182 42.757 44.891 1 8.29 ? O2P FMN 170 A 1 HETATM 31 O O3P FMN . . . B 2 1.356 41.359 44.165 1 9.23 ? O3P FMN 170 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 31 #