data_1D2A # _model_server_result.job_id lbeejG3M7Jb7PncNt63KXg _model_server_result.datetime_utc '2024-11-20 05:21:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1d2a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":401}' # _entry.id 1D2A # _exptl.entry_id 1D2A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 135.127 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ADENINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1D2A _cell.length_a 51.492 _cell.length_b 63.272 _cell.length_c 97.59 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1D2A _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C5 H5 N5' _chem_comp.formula_weight 135.127 _chem_comp.id ADE _chem_comp.mon_nstd_flag . _chem_comp.name ADENINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N9 C8 ADE sing 1 n y N9 C4 ADE sing 2 n y N9 HN9 ADE sing 3 n n C8 N7 ADE doub 4 n y C8 H8 ADE sing 5 n n N7 C5 ADE sing 6 n y C5 C6 ADE sing 7 n y C5 C4 ADE doub 8 n y C6 N6 ADE sing 9 n n C6 N1 ADE doub 10 n y N6 HN61 ADE sing 11 n n N6 HN62 ADE sing 12 n n N1 C2 ADE sing 13 n y C2 N3 ADE doub 14 n y C2 H2 ADE sing 15 n n N3 C4 ADE sing 16 n y # _atom_sites.entry_id 1D2A _atom_sites.fract_transf_matrix[1][1] 0.01942 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015805 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010247 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 402 1 PO4 PO4 . D 3 CL A 1 404 1 CL CL . E 2 PO4 B 1 403 2 PO4 PO4 . F 4 ADE B 1 401 1 ADE ADE . G 5 HOH A 1 405 1 HOH HOH . G 5 HOH A 2 406 2 HOH HOH . G 5 HOH A 3 407 6 HOH HOH . G 5 HOH A 4 408 7 HOH HOH . G 5 HOH A 5 409 8 HOH HOH . G 5 HOH A 6 410 9 HOH HOH . G 5 HOH A 7 411 10 HOH HOH . G 5 HOH A 8 412 11 HOH HOH . G 5 HOH A 9 413 16 HOH HOH . G 5 HOH A 10 414 17 HOH HOH . G 5 HOH A 11 415 18 HOH HOH . G 5 HOH A 12 416 19 HOH HOH . G 5 HOH A 13 417 20 HOH HOH . G 5 HOH A 14 418 21 HOH HOH . G 5 HOH A 15 419 22 HOH HOH . G 5 HOH A 16 420 23 HOH HOH . G 5 HOH A 17 421 29 HOH HOH . G 5 HOH A 18 422 30 HOH HOH . G 5 HOH A 19 423 31 HOH HOH . G 5 HOH A 20 424 32 HOH HOH . G 5 HOH A 21 425 33 HOH HOH . G 5 HOH A 22 426 34 HOH HOH . G 5 HOH A 23 427 54 HOH HOH . G 5 HOH A 24 428 55 HOH HOH . G 5 HOH A 25 429 56 HOH HOH . G 5 HOH A 26 430 57 HOH HOH . G 5 HOH A 27 431 58 HOH HOH . G 5 HOH A 28 432 59 HOH HOH . G 5 HOH A 29 433 60 HOH HOH . G 5 HOH A 30 434 61 HOH HOH . G 5 HOH A 31 435 62 HOH HOH . G 5 HOH A 32 436 63 HOH HOH . G 5 HOH A 33 437 64 HOH HOH . G 5 HOH A 34 438 65 HOH HOH . G 5 HOH A 35 439 66 HOH HOH . G 5 HOH A 36 440 67 HOH HOH . G 5 HOH A 37 441 68 HOH HOH . G 5 HOH A 38 442 69 HOH HOH . G 5 HOH A 39 443 70 HOH HOH . G 5 HOH A 40 444 71 HOH HOH . G 5 HOH A 41 445 72 HOH HOH . G 5 HOH A 42 446 73 HOH HOH . G 5 HOH A 43 447 74 HOH HOH . G 5 HOH A 44 448 75 HOH HOH . G 5 HOH A 45 449 76 HOH HOH . G 5 HOH A 46 450 78 HOH HOH . G 5 HOH A 47 451 79 HOH HOH . G 5 HOH A 48 452 80 HOH HOH . G 5 HOH A 49 453 82 HOH HOH . G 5 HOH A 50 454 83 HOH HOH . G 5 HOH A 51 455 84 HOH HOH . G 5 HOH A 52 456 85 HOH HOH . G 5 HOH A 53 457 87 HOH HOH . G 5 HOH A 54 458 88 HOH HOH . G 5 HOH A 55 459 89 HOH HOH . G 5 HOH A 56 460 90 HOH HOH . G 5 HOH A 57 461 91 HOH HOH . G 5 HOH A 58 462 92 HOH HOH . G 5 HOH A 59 463 93 HOH HOH . G 5 HOH A 60 464 94 HOH HOH . G 5 HOH A 61 465 95 HOH HOH . G 5 HOH A 62 466 96 HOH HOH . G 5 HOH A 63 467 97 HOH HOH . G 5 HOH A 64 468 98 HOH HOH . G 5 HOH A 65 469 99 HOH HOH . G 5 HOH A 66 470 100 HOH HOH . G 5 HOH A 67 471 101 HOH HOH . G 5 HOH A 68 472 102 HOH HOH . G 5 HOH A 69 473 103 HOH HOH . G 5 HOH A 70 474 104 HOH HOH . G 5 HOH A 71 475 105 HOH HOH . G 5 HOH A 72 476 106 HOH HOH . G 5 HOH A 73 477 107 HOH HOH . G 5 HOH A 74 478 127 HOH HOH . G 5 HOH A 75 479 128 HOH HOH . G 5 HOH A 76 480 130 HOH HOH . G 5 HOH A 77 481 131 HOH HOH . G 5 HOH A 78 482 132 HOH HOH . G 5 HOH A 79 483 133 HOH HOH . G 5 HOH A 80 484 134 HOH HOH . G 5 HOH A 81 485 135 HOH HOH . G 5 HOH A 82 486 136 HOH HOH . G 5 HOH A 83 487 137 HOH HOH . G 5 HOH A 84 488 138 HOH HOH . G 5 HOH A 85 489 139 HOH HOH . G 5 HOH A 86 490 140 HOH HOH . G 5 HOH A 87 491 153 HOH HOH . G 5 HOH A 88 492 154 HOH HOH . G 5 HOH A 89 493 155 HOH HOH . G 5 HOH A 90 494 156 HOH HOH . G 5 HOH A 91 495 165 HOH HOH . G 5 HOH A 92 496 168 HOH HOH . G 5 HOH A 93 497 169 HOH HOH . G 5 HOH A 94 498 170 HOH HOH . G 5 HOH A 95 499 171 HOH HOH . G 5 HOH A 96 500 173 HOH HOH . G 5 HOH A 97 501 174 HOH HOH . G 5 HOH A 98 502 178 HOH HOH . G 5 HOH A 99 503 182 HOH HOH . G 5 HOH A 100 504 183 HOH HOH . G 5 HOH A 101 505 184 HOH HOH . G 5 HOH A 102 506 185 HOH HOH . G 5 HOH A 103 507 190 HOH HOH . G 5 HOH A 104 508 191 HOH HOH . G 5 HOH A 105 509 192 HOH HOH . G 5 HOH A 106 510 194 HOH HOH . G 5 HOH A 107 511 195 HOH HOH . G 5 HOH A 108 512 196 HOH HOH . G 5 HOH A 109 513 199 HOH HOH . G 5 HOH A 110 514 203 HOH HOH . G 5 HOH A 111 515 206 HOH HOH . G 5 HOH A 112 516 207 HOH HOH . G 5 HOH A 113 517 208 HOH HOH . G 5 HOH A 114 518 209 HOH HOH . G 5 HOH A 115 519 211 HOH HOH . G 5 HOH A 116 520 212 HOH HOH . G 5 HOH A 117 521 213 HOH HOH . G 5 HOH A 118 522 220 HOH HOH . G 5 HOH A 119 523 221 HOH HOH . G 5 HOH A 120 524 222 HOH HOH . G 5 HOH A 121 525 223 HOH HOH . G 5 HOH A 122 526 224 HOH HOH . G 5 HOH A 123 527 225 HOH HOH . G 5 HOH A 124 528 226 HOH HOH . G 5 HOH A 125 529 227 HOH HOH . G 5 HOH A 126 530 228 HOH HOH . G 5 HOH A 127 531 229 HOH HOH . G 5 HOH A 128 532 230 HOH HOH . G 5 HOH A 129 533 231 HOH HOH . G 5 HOH A 130 534 232 HOH HOH . G 5 HOH A 131 535 236 HOH HOH . G 5 HOH A 132 536 239 HOH HOH . G 5 HOH A 133 537 240 HOH HOH . G 5 HOH A 134 538 241 HOH HOH . G 5 HOH A 135 539 242 HOH HOH . G 5 HOH A 136 540 243 HOH HOH . G 5 HOH A 137 541 244 HOH HOH . G 5 HOH A 138 542 245 HOH HOH . G 5 HOH A 139 543 246 HOH HOH . G 5 HOH A 140 544 252 HOH HOH . G 5 HOH A 141 545 253 HOH HOH . G 5 HOH A 142 546 255 HOH HOH . G 5 HOH A 143 547 257 HOH HOH . G 5 HOH A 144 548 258 HOH HOH . G 5 HOH A 145 549 259 HOH HOH . G 5 HOH A 146 550 260 HOH HOH . G 5 HOH A 147 551 261 HOH HOH . G 5 HOH A 148 552 265 HOH HOH . G 5 HOH A 149 553 269 HOH HOH . G 5 HOH A 150 554 270 HOH HOH . G 5 HOH A 151 555 271 HOH HOH . G 5 HOH A 152 556 272 HOH HOH . G 5 HOH A 153 557 273 HOH HOH . G 5 HOH A 154 558 274 HOH HOH . G 5 HOH A 155 559 275 HOH HOH . G 5 HOH A 156 560 276 HOH HOH . G 5 HOH A 157 561 277 HOH HOH . G 5 HOH A 158 562 278 HOH HOH . G 5 HOH A 159 563 279 HOH HOH . G 5 HOH A 160 564 284 HOH HOH . G 5 HOH A 161 565 292 HOH HOH . G 5 HOH A 162 566 295 HOH HOH . G 5 HOH A 163 567 296 HOH HOH . G 5 HOH A 164 568 297 HOH HOH . G 5 HOH A 165 569 298 HOH HOH . G 5 HOH A 166 570 299 HOH HOH . G 5 HOH A 167 571 300 HOH HOH . H 5 HOH B 1 404 3 HOH HOH . H 5 HOH B 2 405 4 HOH HOH . H 5 HOH B 3 406 5 HOH HOH . H 5 HOH B 4 407 12 HOH HOH . H 5 HOH B 5 408 13 HOH HOH . H 5 HOH B 6 409 14 HOH HOH . H 5 HOH B 7 410 15 HOH HOH . H 5 HOH B 8 411 24 HOH HOH . H 5 HOH B 9 412 25 HOH HOH . H 5 HOH B 10 413 26 HOH HOH . H 5 HOH B 11 414 27 HOH HOH . H 5 HOH B 12 415 28 HOH HOH . H 5 HOH B 13 416 35 HOH HOH . H 5 HOH B 14 417 36 HOH HOH . H 5 HOH B 15 418 37 HOH HOH . H 5 HOH B 16 419 38 HOH HOH . H 5 HOH B 17 420 39 HOH HOH . H 5 HOH B 18 421 40 HOH HOH . H 5 HOH B 19 422 41 HOH HOH . H 5 HOH B 20 423 42 HOH HOH . H 5 HOH B 21 424 43 HOH HOH . H 5 HOH B 22 425 44 HOH HOH . H 5 HOH B 23 426 45 HOH HOH . H 5 HOH B 24 427 46 HOH HOH . H 5 HOH B 25 428 47 HOH HOH . H 5 HOH B 26 429 48 HOH HOH . H 5 HOH B 27 430 49 HOH HOH . H 5 HOH B 28 431 50 HOH HOH . H 5 HOH B 29 432 51 HOH HOH . H 5 HOH B 30 433 52 HOH HOH . H 5 HOH B 31 434 53 HOH HOH . H 5 HOH B 32 435 77 HOH HOH . H 5 HOH B 33 436 81 HOH HOH . H 5 HOH B 34 437 86 HOH HOH . H 5 HOH B 35 438 108 HOH HOH . H 5 HOH B 36 439 109 HOH HOH . H 5 HOH B 37 440 110 HOH HOH . H 5 HOH B 38 441 111 HOH HOH . H 5 HOH B 39 442 112 HOH HOH . H 5 HOH B 40 443 113 HOH HOH . H 5 HOH B 41 444 114 HOH HOH . H 5 HOH B 42 445 115 HOH HOH . H 5 HOH B 43 446 116 HOH HOH . H 5 HOH B 44 447 117 HOH HOH . H 5 HOH B 45 448 118 HOH HOH . H 5 HOH B 46 449 119 HOH HOH . H 5 HOH B 47 450 120 HOH HOH . H 5 HOH B 48 451 121 HOH HOH . H 5 HOH B 49 452 122 HOH HOH . H 5 HOH B 50 453 123 HOH HOH . H 5 HOH B 51 454 124 HOH HOH . H 5 HOH B 52 455 125 HOH HOH . H 5 HOH B 53 456 126 HOH HOH . H 5 HOH B 54 457 129 HOH HOH . H 5 HOH B 55 458 141 HOH HOH . H 5 HOH B 56 459 142 HOH HOH . H 5 HOH B 57 460 143 HOH HOH . H 5 HOH B 58 461 144 HOH HOH . H 5 HOH B 59 462 145 HOH HOH . H 5 HOH B 60 463 146 HOH HOH . H 5 HOH B 61 464 147 HOH HOH . H 5 HOH B 62 465 148 HOH HOH . H 5 HOH B 63 466 149 HOH HOH . H 5 HOH B 64 467 150 HOH HOH . H 5 HOH B 65 468 151 HOH HOH . H 5 HOH B 66 469 152 HOH HOH . H 5 HOH B 67 470 157 HOH HOH . H 5 HOH B 68 471 158 HOH HOH . H 5 HOH B 69 472 159 HOH HOH . H 5 HOH B 70 473 160 HOH HOH . H 5 HOH B 71 474 161 HOH HOH . H 5 HOH B 72 475 162 HOH HOH . H 5 HOH B 73 476 163 HOH HOH . H 5 HOH B 74 477 164 HOH HOH . H 5 HOH B 75 478 166 HOH HOH . H 5 HOH B 76 479 167 HOH HOH . H 5 HOH B 77 480 172 HOH HOH . H 5 HOH B 78 481 175 HOH HOH . H 5 HOH B 79 482 176 HOH HOH . H 5 HOH B 80 483 177 HOH HOH . H 5 HOH B 81 484 179 HOH HOH . H 5 HOH B 82 485 180 HOH HOH . H 5 HOH B 83 486 181 HOH HOH . H 5 HOH B 84 487 186 HOH HOH . H 5 HOH B 85 488 187 HOH HOH . H 5 HOH B 86 489 188 HOH HOH . H 5 HOH B 87 490 189 HOH HOH . H 5 HOH B 88 491 193 HOH HOH . H 5 HOH B 89 492 197 HOH HOH . H 5 HOH B 90 493 198 HOH HOH . H 5 HOH B 91 494 200 HOH HOH . H 5 HOH B 92 495 201 HOH HOH . H 5 HOH B 93 496 202 HOH HOH . H 5 HOH B 94 497 204 HOH HOH . H 5 HOH B 95 498 205 HOH HOH . H 5 HOH B 96 499 210 HOH HOH . H 5 HOH B 97 500 214 HOH HOH . H 5 HOH B 98 501 215 HOH HOH . H 5 HOH B 99 502 216 HOH HOH . H 5 HOH B 100 503 217 HOH HOH . H 5 HOH B 101 504 218 HOH HOH . H 5 HOH B 102 505 219 HOH HOH . H 5 HOH B 103 506 233 HOH HOH . H 5 HOH B 104 507 234 HOH HOH . H 5 HOH B 105 508 235 HOH HOH . H 5 HOH B 106 509 237 HOH HOH . H 5 HOH B 107 510 238 HOH HOH . H 5 HOH B 108 511 247 HOH HOH . H 5 HOH B 109 512 248 HOH HOH . H 5 HOH B 110 513 249 HOH HOH . H 5 HOH B 111 514 250 HOH HOH . H 5 HOH B 112 515 251 HOH HOH . H 5 HOH B 113 516 254 HOH HOH . H 5 HOH B 114 517 256 HOH HOH . H 5 HOH B 115 518 262 HOH HOH . H 5 HOH B 116 519 263 HOH HOH . H 5 HOH B 117 520 264 HOH HOH . H 5 HOH B 118 521 266 HOH HOH . H 5 HOH B 119 522 267 HOH HOH . H 5 HOH B 120 523 268 HOH HOH . H 5 HOH B 121 524 280 HOH HOH . H 5 HOH B 122 525 281 HOH HOH . H 5 HOH B 123 526 282 HOH HOH . H 5 HOH B 124 527 283 HOH HOH . H 5 HOH B 125 528 285 HOH HOH . H 5 HOH B 126 529 286 HOH HOH . H 5 HOH B 127 530 287 HOH HOH . H 5 HOH B 128 531 288 HOH HOH . H 5 HOH B 129 532 289 HOH HOH . H 5 HOH B 130 533 290 HOH HOH . H 5 HOH B 131 534 291 HOH HOH . H 5 HOH B 132 535 293 HOH HOH . H 5 HOH B 133 536 294 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N9 ADE . . . F 4 -3.712 63.903 22.929 1 19.91 ? N9 ADE 401 B 1 HETATM 2 C C8 ADE . . . F 4 -4.77 64.23 22.115 1 12.89 ? C8 ADE 401 B 1 HETATM 3 N N7 ADE . . . F 4 -5.519 65.193 22.588 1 17.31 ? N7 ADE 401 B 1 HETATM 4 C C5 ADE . . . F 4 -4.919 65.53 23.778 1 20.63 ? C5 ADE 401 B 1 HETATM 5 C C6 ADE . . . F 4 -5.225 66.468 24.769 1 20.8 ? C6 ADE 401 B 1 HETATM 6 N N6 ADE . . . F 4 -6.268 67.275 24.66 1 21.54 ? N6 ADE 401 B 1 HETATM 7 N N1 ADE . . . F 4 -4.387 66.53 25.856 1 15.64 ? N1 ADE 401 B 1 HETATM 8 C C2 ADE . . . F 4 -3.329 65.703 25.946 1 16.68 ? C2 ADE 401 B 1 HETATM 9 N N3 ADE . . . F 4 -2.958 64.77 25.064 1 18.34 ? N3 ADE 401 B 1 HETATM 10 C C4 ADE . . . F 4 -3.811 64.738 24.005 1 15.25 ? C4 ADE 401 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 10 #