data_1D2N # _model_server_result.job_id cmXdzx7AP12ofqGyvY0nSw _model_server_result.datetime_utc '2024-11-25 20:10:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1d2n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":99}' # _entry.id 1D2N # _exptl.entry_id 1D2N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1D2N _cell.length_a 116.33 _cell.length_b 116.33 _cell.length_c 40.24 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1D2N _symmetry.cell_setting ? _symmetry.Int_Tables_number 168 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 6' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 5 'crystal symmetry operation' 5_555 y,-x+y,z 0.5 0.866025 0 -0.866025 0.5 0 0 0 1 0 0 0 6 'crystal symmetry operation' 6_555 x-y,x,z 0.5 -0.866025 0 0.866025 0.5 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C O2G ANP . A ANP 1 1_555 B MG MG . A MG 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc2 C O1B ANP . A ANP 1 1_555 B MG MG . A MG 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc3 B MG MG . A MG 99 1_555 E O HOH . A HOH 242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? metalc ? metalc4 B MG MG . A MG 99 1_555 E O HOH . A HOH 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc5 B MG MG . A MG 99 1_555 E O HOH . A HOH 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc6 B MG MG . A MG 99 1_555 A OG1 THR 78 A THR 558 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1D2N _atom_sites.fract_transf_matrix[1][1] 0.008596 _atom_sites.fract_transf_matrix[1][2] 0.004963 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009926 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024851 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 99 99 MG MG . C 3 ANP A 1 1 1 ANP ANP . D 4 GOL A 1 371 371 GOL GOL . E 5 HOH A 1 100 100 HOH HOH . E 5 HOH A 2 101 101 HOH HOH . E 5 HOH A 3 102 102 HOH HOH . E 5 HOH A 4 103 103 HOH HOH . E 5 HOH A 5 104 104 HOH HOH . E 5 HOH A 6 105 105 HOH HOH . E 5 HOH A 7 106 106 HOH HOH . E 5 HOH A 8 107 107 HOH HOH . E 5 HOH A 9 108 108 HOH HOH . E 5 HOH A 10 109 109 HOH HOH . E 5 HOH A 11 110 110 HOH HOH . E 5 HOH A 12 111 111 HOH HOH . E 5 HOH A 13 112 112 HOH HOH . E 5 HOH A 14 113 113 HOH HOH . E 5 HOH A 15 114 114 HOH HOH . E 5 HOH A 16 115 115 HOH HOH . E 5 HOH A 17 116 116 HOH HOH . E 5 HOH A 18 117 117 HOH HOH . E 5 HOH A 19 118 118 HOH HOH . E 5 HOH A 20 119 119 HOH HOH . E 5 HOH A 21 120 120 HOH HOH . E 5 HOH A 22 121 121 HOH HOH . E 5 HOH A 23 122 122 HOH HOH . E 5 HOH A 24 123 123 HOH HOH . E 5 HOH A 25 124 124 HOH HOH . E 5 HOH A 26 125 125 HOH HOH . E 5 HOH A 27 126 126 HOH HOH . E 5 HOH A 28 127 127 HOH HOH . E 5 HOH A 29 128 128 HOH HOH . E 5 HOH A 30 129 129 HOH HOH . E 5 HOH A 31 130 130 HOH HOH . E 5 HOH A 32 131 131 HOH HOH . E 5 HOH A 33 132 132 HOH HOH . E 5 HOH A 34 133 133 HOH HOH . E 5 HOH A 35 134 134 HOH HOH . E 5 HOH A 36 135 135 HOH HOH . E 5 HOH A 37 136 136 HOH HOH . E 5 HOH A 38 137 137 HOH HOH . E 5 HOH A 39 138 138 HOH HOH . E 5 HOH A 40 139 139 HOH HOH . E 5 HOH A 41 140 140 HOH HOH . E 5 HOH A 42 141 141 HOH HOH . E 5 HOH A 43 142 142 HOH HOH . E 5 HOH A 44 143 143 HOH HOH . E 5 HOH A 45 144 144 HOH HOH . E 5 HOH A 46 145 145 HOH HOH . E 5 HOH A 47 146 146 HOH HOH . E 5 HOH A 48 147 147 HOH HOH . E 5 HOH A 49 148 148 HOH HOH . E 5 HOH A 50 149 149 HOH HOH . E 5 HOH A 51 150 150 HOH HOH . E 5 HOH A 52 151 151 HOH HOH . E 5 HOH A 53 152 152 HOH HOH . E 5 HOH A 54 153 153 HOH HOH . E 5 HOH A 55 154 154 HOH HOH . E 5 HOH A 56 155 155 HOH HOH . E 5 HOH A 57 156 156 HOH HOH . E 5 HOH A 58 157 157 HOH HOH . E 5 HOH A 59 158 158 HOH HOH . E 5 HOH A 60 159 159 HOH HOH . E 5 HOH A 61 160 160 HOH HOH . E 5 HOH A 62 161 161 HOH HOH . E 5 HOH A 63 162 162 HOH HOH . E 5 HOH A 64 163 163 HOH HOH . E 5 HOH A 65 164 164 HOH HOH . E 5 HOH A 66 165 165 HOH HOH . E 5 HOH A 67 166 166 HOH HOH . E 5 HOH A 68 167 167 HOH HOH . E 5 HOH A 69 168 168 HOH HOH . E 5 HOH A 70 169 169 HOH HOH . E 5 HOH A 71 170 170 HOH HOH . E 5 HOH A 72 171 171 HOH HOH . E 5 HOH A 73 172 172 HOH HOH . E 5 HOH A 74 173 173 HOH HOH . E 5 HOH A 75 174 174 HOH HOH . E 5 HOH A 76 175 175 HOH HOH . E 5 HOH A 77 176 176 HOH HOH . E 5 HOH A 78 177 177 HOH HOH . E 5 HOH A 79 178 178 HOH HOH . E 5 HOH A 80 179 179 HOH HOH . E 5 HOH A 81 180 180 HOH HOH . E 5 HOH A 82 181 181 HOH HOH . E 5 HOH A 83 182 182 HOH HOH . E 5 HOH A 84 183 183 HOH HOH . E 5 HOH A 85 184 184 HOH HOH . E 5 HOH A 86 185 185 HOH HOH . E 5 HOH A 87 186 186 HOH HOH . E 5 HOH A 88 187 187 HOH HOH . E 5 HOH A 89 188 188 HOH HOH . E 5 HOH A 90 189 189 HOH HOH . E 5 HOH A 91 190 190 HOH HOH . E 5 HOH A 92 191 191 HOH HOH . E 5 HOH A 93 192 192 HOH HOH . E 5 HOH A 94 193 193 HOH HOH . E 5 HOH A 95 194 194 HOH HOH . E 5 HOH A 96 195 195 HOH HOH . E 5 HOH A 97 196 196 HOH HOH . E 5 HOH A 98 197 197 HOH HOH . E 5 HOH A 99 198 198 HOH HOH . E 5 HOH A 100 199 199 HOH HOH . E 5 HOH A 101 200 200 HOH HOH . E 5 HOH A 102 201 201 HOH HOH . E 5 HOH A 103 202 202 HOH HOH . E 5 HOH A 104 203 203 HOH HOH . E 5 HOH A 105 204 204 HOH HOH . E 5 HOH A 106 205 205 HOH HOH . E 5 HOH A 107 206 206 HOH HOH . E 5 HOH A 108 207 207 HOH HOH . E 5 HOH A 109 208 208 HOH HOH . E 5 HOH A 110 209 209 HOH HOH . E 5 HOH A 111 210 210 HOH HOH . E 5 HOH A 112 211 211 HOH HOH . E 5 HOH A 113 212 212 HOH HOH . E 5 HOH A 114 213 213 HOH HOH . E 5 HOH A 115 214 214 HOH HOH . E 5 HOH A 116 215 215 HOH HOH . E 5 HOH A 117 216 216 HOH HOH . E 5 HOH A 118 217 217 HOH HOH . E 5 HOH A 119 218 218 HOH HOH . E 5 HOH A 120 219 219 HOH HOH . E 5 HOH A 121 220 220 HOH HOH . E 5 HOH A 122 221 221 HOH HOH . E 5 HOH A 123 222 222 HOH HOH . E 5 HOH A 124 223 223 HOH HOH . E 5 HOH A 125 224 224 HOH HOH . E 5 HOH A 126 225 225 HOH HOH . E 5 HOH A 127 226 226 HOH HOH . E 5 HOH A 128 227 227 HOH HOH . E 5 HOH A 129 228 228 HOH HOH . E 5 HOH A 130 229 229 HOH HOH . E 5 HOH A 131 230 230 HOH HOH . E 5 HOH A 132 231 231 HOH HOH . E 5 HOH A 133 232 232 HOH HOH . E 5 HOH A 134 233 233 HOH HOH . E 5 HOH A 135 234 234 HOH HOH . E 5 HOH A 136 235 235 HOH HOH . E 5 HOH A 137 236 236 HOH HOH . E 5 HOH A 138 237 237 HOH HOH . E 5 HOH A 139 238 238 HOH HOH . E 5 HOH A 140 239 239 HOH HOH . E 5 HOH A 141 240 240 HOH HOH . E 5 HOH A 142 241 241 HOH HOH . E 5 HOH A 143 242 242 HOH HOH . E 5 HOH A 144 243 243 HOH HOH . E 5 HOH A 145 244 244 HOH HOH . E 5 HOH A 146 245 245 HOH HOH . E 5 HOH A 147 246 246 HOH HOH . E 5 HOH A 148 247 247 HOH HOH . E 5 HOH A 149 248 248 HOH HOH . E 5 HOH A 150 249 249 HOH HOH . E 5 HOH A 151 250 250 HOH HOH . E 5 HOH A 152 251 251 HOH HOH . E 5 HOH A 153 252 252 HOH HOH . E 5 HOH A 154 253 253 HOH HOH . E 5 HOH A 155 254 254 HOH HOH . E 5 HOH A 156 255 255 HOH HOH . E 5 HOH A 157 256 256 HOH HOH . E 5 HOH A 158 257 257 HOH HOH . E 5 HOH A 159 258 258 HOH HOH . E 5 HOH A 160 259 259 HOH HOH . E 5 HOH A 161 260 260 HOH HOH . E 5 HOH A 162 261 261 HOH HOH . E 5 HOH A 163 262 262 HOH HOH . E 5 HOH A 164 263 263 HOH HOH . E 5 HOH A 165 264 264 HOH HOH . E 5 HOH A 166 265 265 HOH HOH . E 5 HOH A 167 266 266 HOH HOH . E 5 HOH A 168 267 267 HOH HOH . E 5 HOH A 169 268 268 HOH HOH . E 5 HOH A 170 269 269 HOH HOH . E 5 HOH A 171 270 270 HOH HOH . E 5 HOH A 172 271 271 HOH HOH . E 5 HOH A 173 272 272 HOH HOH . E 5 HOH A 174 273 273 HOH HOH . E 5 HOH A 175 274 274 HOH HOH . E 5 HOH A 176 275 275 HOH HOH . E 5 HOH A 177 276 276 HOH HOH . E 5 HOH A 178 277 277 HOH HOH . E 5 HOH A 179 278 278 HOH HOH . E 5 HOH A 180 279 279 HOH HOH . E 5 HOH A 181 280 280 HOH HOH . E 5 HOH A 182 281 281 HOH HOH . E 5 HOH A 183 282 282 HOH HOH . E 5 HOH A 184 283 283 HOH HOH . E 5 HOH A 185 284 284 HOH HOH . E 5 HOH A 186 285 285 HOH HOH . E 5 HOH A 187 286 286 HOH HOH . E 5 HOH A 188 287 287 HOH HOH . E 5 HOH A 189 288 288 HOH HOH . E 5 HOH A 190 289 289 HOH HOH . E 5 HOH A 191 290 290 HOH HOH . E 5 HOH A 192 291 291 HOH HOH . E 5 HOH A 193 292 292 HOH HOH . E 5 HOH A 194 293 293 HOH HOH . E 5 HOH A 195 294 294 HOH HOH . E 5 HOH A 196 295 295 HOH HOH . E 5 HOH A 197 296 296 HOH HOH . E 5 HOH A 198 297 297 HOH HOH . E 5 HOH A 199 298 298 HOH HOH . E 5 HOH A 200 299 299 HOH HOH . E 5 HOH A 201 300 300 HOH HOH . E 5 HOH A 202 301 301 HOH HOH . E 5 HOH A 203 302 302 HOH HOH . E 5 HOH A 204 303 303 HOH HOH . E 5 HOH A 205 304 304 HOH HOH . E 5 HOH A 206 305 305 HOH HOH . E 5 HOH A 207 306 306 HOH HOH . E 5 HOH A 208 307 307 HOH HOH . E 5 HOH A 209 308 308 HOH HOH . E 5 HOH A 210 309 309 HOH HOH . E 5 HOH A 211 310 310 HOH HOH . E 5 HOH A 212 311 311 HOH HOH . E 5 HOH A 213 312 312 HOH HOH . E 5 HOH A 214 313 313 HOH HOH . E 5 HOH A 215 314 314 HOH HOH . E 5 HOH A 216 315 315 HOH HOH . E 5 HOH A 217 316 316 HOH HOH . E 5 HOH A 218 317 317 HOH HOH . E 5 HOH A 219 318 318 HOH HOH . E 5 HOH A 220 319 319 HOH HOH . E 5 HOH A 221 320 320 HOH HOH . E 5 HOH A 222 321 321 HOH HOH . E 5 HOH A 223 322 322 HOH HOH . E 5 HOH A 224 323 323 HOH HOH . E 5 HOH A 225 324 324 HOH HOH . E 5 HOH A 226 325 325 HOH HOH . E 5 HOH A 227 326 326 HOH HOH . E 5 HOH A 228 327 327 HOH HOH . E 5 HOH A 229 328 328 HOH HOH . E 5 HOH A 230 329 329 HOH HOH . E 5 HOH A 231 330 330 HOH HOH . E 5 HOH A 232 331 331 HOH HOH . E 5 HOH A 233 332 332 HOH HOH . E 5 HOH A 234 333 333 HOH HOH . E 5 HOH A 235 334 334 HOH HOH . E 5 HOH A 236 335 335 HOH HOH . E 5 HOH A 237 336 336 HOH HOH . E 5 HOH A 238 337 337 HOH HOH . E 5 HOH A 239 338 338 HOH HOH . E 5 HOH A 240 339 339 HOH HOH . E 5 HOH A 241 340 340 HOH HOH . E 5 HOH A 242 341 341 HOH HOH . E 5 HOH A 243 342 342 HOH HOH . E 5 HOH A 244 343 343 HOH HOH . E 5 HOH A 245 344 344 HOH HOH . E 5 HOH A 246 345 345 HOH HOH . E 5 HOH A 247 346 346 HOH HOH . E 5 HOH A 248 347 347 HOH HOH . E 5 HOH A 249 348 348 HOH HOH . E 5 HOH A 250 349 349 HOH HOH . E 5 HOH A 251 350 350 HOH HOH . E 5 HOH A 252 351 351 HOH HOH . E 5 HOH A 253 352 352 HOH HOH . E 5 HOH A 254 353 353 HOH HOH . E 5 HOH A 255 354 354 HOH HOH . E 5 HOH A 256 355 355 HOH HOH . E 5 HOH A 257 356 356 HOH HOH . E 5 HOH A 258 357 357 HOH HOH . E 5 HOH A 259 358 358 HOH HOH . E 5 HOH A 260 359 359 HOH HOH . E 5 HOH A 261 360 360 HOH HOH . E 5 HOH A 262 361 361 HOH HOH . E 5 HOH A 263 362 362 HOH HOH . E 5 HOH A 264 363 363 HOH HOH . E 5 HOH A 265 364 364 HOH HOH . E 5 HOH A 266 365 365 HOH HOH . E 5 HOH A 267 366 366 HOH HOH . E 5 HOH A 268 367 367 HOH HOH . E 5 HOH A 269 368 368 HOH HOH . E 5 HOH A 270 369 369 HOH HOH . E 5 HOH A 271 370 370 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -10.442 _atom_site.Cartn_y 29.009 _atom_site.Cartn_z 11.367 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 21.29 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 99 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #